Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 2.1e-82 308.9 152 100.0
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 4.7e-45 184.9 141 65.2
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 8.5e-39 164.1 117 74.4
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 5.4e-25 118.2 107 57.9
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 1.6e-24 116.7 158 47.5
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 7.7e-24 114.4 150 45.3
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 7.7e-24 114.4 118 54.2
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 1.0e-23 114.0 156 46.8
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 2.2e-23 112.8 140 48.6
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 2.2e-23 112.8 106 55.7
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 3.8e-23 112.1 114 53.5
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.1e-22 110.5 144 45.1
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 2.5e-22 109.4 115 49.6
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 2.5e-22 109.4 139 46.8
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 4.2e-22 108.6 149 43.6
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 4.2e-22 108.6 147 43.5
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 5.5e-22 108.2 141 47.5
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 9.5e-22 107.5 146 46.6
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.2e-21 107.1 146 44.5
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.6e-21 106.7 149 42.3
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.6e-21 106.7 120 49.2
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 1.6e-21 106.7 104 54.8
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 2.1e-21 106.3 107 54.2
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 3.6e-21 105.5 117 50.4
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 3.6e-21 105.5 99 58.6
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 4.7e-21 105.1 107 53.3
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 4.7e-21 105.1 99 58.6
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 4.7e-21 105.1 104 54.8
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 6.1e-21 104.8 101 59.4
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 8.0e-21 104.4 99 57.6
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 1.0e-20 104.0 100 59.0
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.4e-20 103.6 99 57.6
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 1.8e-20 103.2 100 57.0
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 1.8e-20 103.2 112 51.8
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.8e-20 103.2 98 58.2
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 1.8e-20 103.2 139 46.0
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 3.0e-20 102.4 113 50.4
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 5.2e-20 101.7 78 66.7
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 8.8e-20 100.9 140 41.4
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 8.8e-20 100.9 122 48.4
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.2e-19 100.5 131 48.1
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.5e-19 100.1 94 59.6
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 1.5e-19 100.1 97 56.7
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 2.6e-19 99.4 95 55.8
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.6e-19 99.4 97 54.6
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 5.7e-19 98.2 103 52.4
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 5.7e-19 98.2 143 42.0
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 5.7e-19 98.2 97 54.6
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 5.7e-19 98.2 92 53.3
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 5.7e-19 98.2 92 53.3
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 9.8e-19 97.4 79 63.3
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 9.8e-19 97.4 97 54.6
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 1.3e-18 97.1 93 59.1
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 1.3e-18 97.1 97 53.6
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 1.7e-18 96.7 118 43.2
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 3.7e-18 95.5 84 56.0
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 3.7e-18 95.5 137 40.9
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 3.7e-18 95.5 149 39.6
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 3.7e-18 95.5 149 39.6
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 4.9e-18 95.1 99 52.5
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 4.9e-18 95.1 79 62.0
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 4.9e-18 95.1 79 62.0
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 6.3e-18 94.7 76 59.2
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 6.3e-18 94.7 107 53.3
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 8.3e-18 94.4 89 57.3
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 1.1e-17 94.0 143 39.9
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 1.1e-17 94.0 92 55.4
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 2.4e-17 92.8 147 39.5
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 2.4e-17 92.8 102 52.9
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 3.1e-17 92.4 114 46.5
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 3.1e-17 92.4 98 51.0
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 4.1e-17 92.0 93 52.7
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 5.4e-17 91.7 97 52.6
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 5.4e-17 91.7 78 61.5
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 9.2e-17 90.9 90 54.4
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 1.6e-16 90.1 104 51.0
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 2.0e-16 89.7 101 50.5
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 2.0e-16 89.7 68 67.6
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 2.0e-16 89.7 104 47.1
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 3.5e-16 89.0 97 50.5
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 1.3e-15 87.0 99 49.5
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 1.3e-15 87.0 99 49.5
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 1.3e-15 87.0 143 38.5
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 1.3e-15 87.0 70 58.6
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 1.7e-15 86.7 100 51.0
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 1.7e-15 86.7 148 37.2
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 2.3e-15 86.3 99 48.5
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 2.9e-15 85.9 77 57.1
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 5.0e-15 85.1 65 66.2
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 6.6e-15 84.7 99 48.5
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 6.6e-15 84.7 111 43.2
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 4.3e-14 82.0 82 54.9
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 2.6e-11 72.8 53 73.6
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 9.8e-11 70.9 88 45.5
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 2.9e-10 69.3 95 45.3
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 1.4e-09 67.0 124 35.5
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 5.4e-09 65.1 64 51.6
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 7.0e-09 64.7 69 43.5
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.2e-08 63.9 118 33.9
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 1.7e-07 60.1 103 34.0
SEGI_00987 Sequoiadendron giganteum HOM05D007350 ORTHO05D009323 3.3e-06 55.8 131 31.3
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 7.3e-06 54.7 76 38.2


User provided reference genes

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