Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 1.8e-242 842.0 397 100.0
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 6.0e-201 704.1 396 84.6
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 1.7e-184 649.4 317 93.1
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 2.0e-180 636.0 390 77.7
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 3.4e-180 635.2 391 78.0
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 6.4e-179 630.9 400 77.0
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 8.4e-179 630.6 375 78.9
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 8.4e-179 630.6 393 75.6
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 1.1e-178 630.2 377 79.3
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 3.2e-178 628.6 389 77.4
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 2.1e-177 625.9 377 79.8
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 2.1e-177 625.9 376 79.5
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 4.6e-177 624.8 398 74.9
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 7.8e-177 624.0 398 75.1
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 1.0e-176 623.6 384 76.8
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 1.3e-176 623.2 352 83.8
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 1.3e-176 623.2 386 76.7
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 1.7e-176 622.9 351 81.5
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 2.3e-176 622.5 394 75.1
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 2.3e-176 622.5 390 75.9
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 3.0e-176 622.1 328 85.7
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 6.6e-176 620.9 356 80.9
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 8.7e-176 620.5 401 73.8
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.1e-175 620.2 389 76.1
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 7.3e-175 617.5 413 71.9
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 8.1e-174 614.0 375 78.1
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 8.1e-174 614.0 319 87.8
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 8.1e-174 614.0 336 83.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 1.8e-173 612.8 358 78.2
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 2.4e-173 612.5 363 79.9
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 5.3e-173 611.3 352 79.5
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 5.3e-173 611.3 344 82.3
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 1.2e-172 610.1 377 76.9
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 1.5e-172 609.8 357 79.6
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 2.6e-172 609.0 363 79.1
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 3.4e-172 608.6 355 79.4
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.4e-172 608.6 373 76.9
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 4.5e-172 608.2 356 79.8
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 9.9e-172 607.1 336 82.7
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 9.9e-172 607.1 395 72.7
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 2.9e-171 605.5 332 83.1
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 3.8e-171 605.1 343 81.3
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 6.4e-171 604.4 370 76.8
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 6.4e-171 604.4 389 74.0
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 8.4e-171 604.0 319 85.3
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 4.2e-170 601.7 369 74.8
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 4.2e-170 601.7 352 79.3
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 5.4e-170 601.3 352 79.3
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 7.1e-170 600.9 325 83.4
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 2.1e-169 599.4 396 72.0
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 7.9e-169 597.4 364 75.3
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 7.9e-169 597.4 322 83.2
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 1.3e-168 596.7 373 75.6
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 3.9e-168 595.1 316 85.4
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.1e-168 594.7 372 75.3
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 5.1e-168 594.7 371 75.5
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 1.9e-167 592.8 322 83.9
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 3.3e-167 592.0 399 71.7
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 1.3e-166 590.1 347 76.9
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 1.6e-166 589.7 338 79.6
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.6e-166 589.7 371 74.9
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.6e-166 589.7 358 76.8
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.8e-166 589.0 394 70.8
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 3.7e-166 588.6 364 75.8
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.1e-165 585.5 315 84.1
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 5.3e-165 584.7 315 83.2
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 6.9e-165 584.3 358 74.9
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 9.0e-165 583.9 335 80.0
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 9.0e-165 583.9 334 78.7
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 9.0e-165 583.9 334 78.7
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 9.0e-165 583.9 359 78.6
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 1.2e-164 583.6 337 78.9
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 1.7e-163 579.7 371 75.2
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 2.2e-163 579.3 334 78.4
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.8e-163 578.6 334 78.4
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.4e-162 576.6 394 70.8
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 5.5e-162 574.7 337 78.6
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 3.5e-161 572.0 316 81.6
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 4.6e-161 571.6 363 73.8
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 5.1e-160 568.2 325 77.2
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 9.6e-159 563.9 363 72.2
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 1.2e-156 557.0 382 69.4
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.1e-154 550.4 413 65.4
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 1.1e-154 550.4 350 72.0
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 3.2e-154 548.9 389 69.4
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 9.3e-154 547.4 354 74.9
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 6.9e-149 531.2 289 81.0
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.2e-148 530.4 285 82.5
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 1.3e-147 526.9 370 68.1
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 9.4e-146 520.8 284 81.3
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 8.8e-144 514.2 327 69.7
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.3e-143 512.3 311 72.3
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 5.7e-143 511.5 322 73.6
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 2.0e-140 503.1 316 70.3
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 7.7e-140 501.1 317 69.4
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 2.2e-139 499.6 623 47.7
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 3.2e-130 469.2 327 65.1
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.5e-122 443.7 245 80.8
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 1.3e-110 404.1 263 74.1
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 9.5e-106 387.9 267 69.7
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 9.8e-103 377.9 285 64.6
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 2.7e-100 369.8 224 77.7
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 7.8e-92 341.7 351 45.3
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 3.5e-84 316.2 351 43.0
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.6e-82 308.9 314 46.2
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 5.6e-82 308.9 313 45.7
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 2.4e-69 266.9 163 76.7
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 2.5e-58 230.3 206 54.9
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.8e-57 226.9 126 77.8
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 6.2e-57 225.7 174 62.6
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 1.2e-55 221.5 343 37.6
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 1.5e-50 204.5 129 74.4
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 2.5e-50 203.8 204 54.4
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 6.9e-48 195.7 196 46.4
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 2.2e-30 137.5 85 72.9
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 4.5e-23 113.2 71 71.8
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 4.8e-17 93.2 79 55.7
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 1.6e-12 78.2 74 58.1
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 1.4e-11 75.1 39 76.9
Cfa023956 Carpinus fangiana HOM05D026080 ORTHO05D034125 1.4e-08 65.1 112 33.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 3.1e-08 63.9 64 46.9
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.6e-07 60.8 43 53.5
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 1.0e-06 58.9 122 31.1
Hma1.2p1_0200F.1_g086050 Hydrangea macrophylla HOM05D006483 ORTHO05D007837 1.0e-06 58.9 62 53.2
Aqoxy4G01160 Aquilegia oxysepala HOM05D000363 ORTHO05D000236 5.0e-06 56.6 124 29.8


User provided reference genes

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