Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 2.2e-87 325.5 154 100.0
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 5.0e-71 271.2 170 81.8
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 5.0e-71 271.2 170 81.8
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 5.0e-71 271.2 170 81.8
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.5e-70 269.6 172 80.8
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.5e-70 269.6 172 80.8
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.0e-68 263.5 170 80.0
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.0e-68 263.5 170 80.0
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.4e-68 263.1 172 80.8
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 1.2e-67 260.0 171 78.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 5.7e-67 257.7 170 78.2
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.7e-66 256.1 170 78.2
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.8e-66 255.4 166 78.9
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 4.9e-66 254.6 170 77.6
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 8.3e-66 253.8 170 77.6
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.1e-65 253.4 172 77.9
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.1e-65 253.4 172 77.9
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.1e-65 253.4 172 77.9
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.1e-65 253.4 172 77.9
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.1e-65 253.4 170 78.2
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.1e-65 253.4 172 77.9
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.8e-65 252.7 170 77.1
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.8e-65 252.7 170 77.6
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.8e-65 252.7 170 77.6
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.4e-65 252.3 172 77.3
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.4e-65 252.3 172 77.3
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-65 251.9 170 77.6
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-65 251.9 170 77.6
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.1e-65 251.9 170 77.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 5.4e-65 251.1 172 77.3
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-64 249.2 168 77.4
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 2.0e-64 249.2 168 77.4
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 2.7e-64 248.8 170 77.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 2.7e-64 248.8 170 77.1
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 4.5e-64 248.1 170 76.5
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 5.9e-64 247.7 172 76.7
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 7.7e-64 247.3 170 76.5
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.0e-63 246.9 169 76.9
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.3e-63 246.5 169 76.9
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.3e-63 246.5 168 76.8
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 5.0e-63 244.6 170 75.9
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.6e-63 244.2 170 75.3
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 6.6e-63 244.2 170 74.7
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 8.6e-63 243.8 169 76.3
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.1e-62 243.4 172 75.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 2.5e-62 242.3 168 75.0
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.2e-62 241.5 167 74.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 5.5e-62 241.1 172 74.4
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.2e-61 240.0 167 73.7
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 1.2e-59 233.4 172 73.3
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-59 231.9 172 72.1
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 5.7e-59 231.1 167 72.5
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 5.7e-59 231.1 164 73.8
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 5.7e-59 231.1 164 73.8
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 3.7e-58 228.4 153 76.5
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-58 228.0 172 71.5
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.4e-57 226.5 157 74.5
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-57 224.6 169 70.4
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-56 222.6 165 72.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.0e-55 220.3 168 70.8
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 8.6e-55 217.2 162 71.6
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-54 214.5 168 68.5
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.8e-52 209.5 155 70.3
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-52 209.5 172 65.7
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-52 209.5 171 67.8
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-52 207.6 164 68.3
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 2.0e-51 206.1 144 75.0
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 3.4e-51 205.3 149 71.1
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.4e-51 204.9 141 76.6
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 4.4e-51 204.9 141 76.6
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.3e-50 203.4 140 77.1
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 1.3e-50 203.4 144 75.0
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 8.3e-50 200.7 137 77.4
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-46 188.7 139 74.1
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-44 181.4 136 72.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 6.8e-44 181.0 170 62.4
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-44 180.6 139 71.2
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-44 180.6 139 71.2
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-43 179.9 149 66.4
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-43 179.1 151 61.6
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-43 177.9 146 67.8
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-41 173.3 145 65.5
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-41 172.9 137 68.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-41 171.4 133 69.9
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-41 171.4 143 65.0
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.6e-39 164.5 130 69.2
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-38 163.3 133 66.9
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-37 160.2 130 66.9
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-37 159.8 109 75.2
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 1.6e-37 159.8 148 60.1
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-37 159.5 129 68.2
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 3.1e-36 155.6 95 83.2
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 5.2e-36 154.8 85 90.6
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-34 149.1 139 64.0
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-33 147.1 154 53.2
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 5.4e-33 144.8 118 67.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 5.4e-33 144.8 118 67.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-33 144.4 129 64.3
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.2e-32 143.7 84 83.3
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-32 143.3 112 68.8
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-31 139.4 119 65.5
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-31 139.4 119 65.5
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.5e-30 136.0 103 71.8
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.6e-29 133.3 99 71.7
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 2.1e-29 132.9 114 65.8
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 3.6e-29 132.1 134 56.7
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-29 131.3 135 59.3
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 8.9e-28 127.5 100 69.0
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-27 127.1 75 82.7
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.5e-27 126.7 101 69.3
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.0e-27 126.3 85 75.3
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 2.6e-27 125.9 145 47.6
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-27 125.9 84 75.0
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-27 124.8 117 63.2
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 3.8e-26 122.1 97 68.0
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 3.8e-26 122.1 154 43.5
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 4.9e-26 121.7 96 68.8
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-25 117.9 83 71.1
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.7e-24 115.9 56 96.4
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 7.8e-24 114.4 56 94.6
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 7.8e-24 114.4 56 94.6
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 7.8e-24 114.4 56 94.6
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 7.8e-24 114.4 56 94.6
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 1.0e-23 114.0 56 94.6
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-23 112.8 102 62.7
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-23 111.7 131 51.1
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.5e-22 110.2 69 76.8
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 1.5e-22 110.2 64 82.8
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 5.6e-22 108.2 53 92.5
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-22 108.2 56 91.1
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 5.6e-22 108.2 99 61.6
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-21 107.1 56 89.3
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-21 107.1 56 87.5
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.3e-21 107.1 51 96.1
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-21 106.3 56 89.3
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-21 105.9 96 62.5
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-21 105.9 57 87.7
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-21 105.9 57 87.7
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.2e-21 104.8 54 88.9
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-21 104.8 56 87.5
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-20 103.2 57 86.0
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-20 103.2 56 85.7
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-20 103.2 56 85.7
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 4.0e-20 102.1 76 68.4
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-20 101.7 94 58.5
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-19 99.4 56 83.9
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-19 97.8 54 85.2
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 9.9e-19 97.4 89 61.8
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 9.9e-19 97.4 58 86.2
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 9.9e-19 97.4 52 92.3
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 9.9e-19 97.4 54 83.3
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-18 95.9 53 84.9
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-18 94.4 56 82.1
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-17 94.0 129 48.8
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 9.3e-17 90.9 56 78.6
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-16 90.1 52 82.7
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 2.7e-16 89.4 41 100.0
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-15 87.4 56 78.6
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.3e-15 87.0 153 37.9
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 2.3e-15 86.3 47 83.0
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 3.3e-14 82.4 144 41.7
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.3e-14 81.3 44 88.6
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 2.6e-11 72.8 41 90.2
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-09 65.5 81 51.9
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 1.6e-08 63.5 36 83.3
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.1e-08 63.2 106 40.6
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 1.3e-07 60.5 35 80.0
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-07 60.1 51 60.8
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-06 57.4 34 79.4
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-06 56.6 27 96.3


User provided reference genes

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