Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0294801 Helianthus annuus HOM05D005305 ORTHO05D006394 6.5e-174 614.4 415 100.0
Lsat_1_v5_gn_5_107520 Lactuca sativa HOM05D005305 ORTHO05D006394 7.2e-72 275.4 432 44.2
HanXRQChr10g0300271 Helianthus annuus HOM05D005305 ORTHO05D006394 3.1e-59 233.4 204 58.8
ECA234G0387 Erigeron canadensis HOM05D005305 ORTHO05D006394 5.5e-48 196.1 200 55.5
Dinv19341 Davidia involucrata HOM05D005305 ORTHO05D006394 3.8e-33 146.7 197 43.7
HanXRQChr11g0337491 Helianthus annuus HOM05D005305 ORTHO05D006394 3.2e-32 143.7 242 37.6
Actinidia33832 Actinidia chinensis HOM05D005305 ORTHO05D006394 4.7e-31 139.8 179 46.9
Lsat_1_v5_gn_7_79481 Lactuca sativa HOM05D005305 ORTHO05D006394 2.0e-29 134.4 187 43.3
Aqoxy6G00392 Aquilegia oxysepala HOM05D005305 ORTHO05D006394 4.4e-29 133.3 248 41.5
Phvul.006G211300 Phaseolus vulgaris HOM05D005305 ORTHO05D006394 1.3e-28 131.7 159 47.2
Lj1C922T21 Lonicera japonica HOM05D005305 ORTHO05D006394 1.7e-28 131.3 228 39.9
Lj6g0020123 Lotus japonicus HOM05D005305 ORTHO05D006394 8.3e-28 129.0 260 35.4
TPR.G19715 Trifolium pratense HOM05D005305 ORTHO05D006394 1.8e-27 127.9 260 39.2
Glyma.08G183700 Glycine max HOM05D005305 ORTHO05D006394 7.0e-27 125.9 259 38.2
ECA236G3147 Erigeron canadensis HOM05D005305 ORTHO05D006394 1.6e-26 124.8 171 43.3
Medtr2g007870 Medicago truncatula HOM05D005305 ORTHO05D006394 2.7e-26 124.0 173 41.6
CSS0043111 Camellia sinensis var. sinensis HOM05D005305 ORTHO05D006394 8.6e-25 119.0 238 39.9
Nn5g28774 Nelumbo nucifera HOM05D005305 ORTHO05D006394 3.3e-24 117.1 206 36.4
Psat1g219600 Pisum sativum HOM05D005305 ORTHO05D006394 4.3e-24 116.7 250 36.4
arahy.Tifrunner.gnm1.ann1.I1A2NR Arachis hypogaea HOM05D005305 ORTHO05D006394 1.6e-23 114.8 226 37.2
Thhalv10009974m.g Eutrema salsugineum HOM05D005305 ORTHO05D006394 1.6e-23 114.8 159 41.5
arahy.Tifrunner.gnm1.ann1.ZL3PAB Arachis hypogaea HOM05D005305 ORTHO05D006394 2.1e-23 114.4 227 37.0
AL1G27270 Arabidopsis lyrata HOM05D005305 ORTHO05D006394 3.6e-23 113.6 140 45.0
Sp1g13500 Schrenkiella parvula HOM05D005305 ORTHO05D006394 3.6e-23 113.6 229 37.1
MELO3C014385.2 Cucumis melo HOM05D005305 ORTHO05D006394 6.1e-23 112.8 214 34.1
BolC5t30066H Brassica oleracea HOM05D005305 ORTHO05D006394 8.0e-23 112.5 175 38.9
Duzib187G0918 Durio zibethinus HOM05D005305 ORTHO05D006394 8.0e-23 112.5 178 40.4
BcaC05g25447 Brassica carinata HOM05D005305 ORTHO05D006394 1.0e-22 112.1 175 38.9
C05p13290 Brassica napus HOM05D005305 ORTHO05D006394 1.0e-22 112.1 175 38.9
Ca_00097_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.4e-22 111.7 242 37.6
Ca_29935_v3 Cicer arietinum L. HOM05D005305 ORTHO05D006394 1.4e-22 111.7 242 37.6
Sed0003606 Sechium edule HOM05D005305 ORTHO05D006394 1.4e-22 111.7 248 37.1
Sp2g12560 Schrenkiella parvula HOM05D005305 ORTHO05D006394 1.8e-22 111.3 219 35.2
VMungo0540G1828 Vigna mungo HOM05D005305 ORTHO05D006394 1.8e-22 111.3 164 43.3
AT1G15190 Arabidopsis thaliana HOM05D005305 ORTHO05D006394 2.3e-22 110.9 140 44.3
Carub.0001s1494 Capsella rubella HOM05D005305 ORTHO05D006394 2.3e-22 110.9 140 43.6
BcaB02g06584 Brassica carinata HOM05D005305 ORTHO05D006394 3.0e-22 110.5 179 38.5
CARHR015700 Cardamine hirsuta HOM05D005305 ORTHO05D006394 3.0e-22 110.5 140 42.9
A06p11170 Brassica napus HOM05D005305 ORTHO05D006394 4.0e-22 110.2 179 38.5
Nn1g06067 Nelumbo nucifera HOM05D005305 ORTHO05D006394 4.0e-22 110.2 208 34.6
Aa31LG2G8790 Aethionema arabicum HOM05D005305 ORTHO05D006394 5.2e-22 109.8 157 40.1
BraA06t24297Z Brassica rapa HOM05D005305 ORTHO05D006394 6.8e-22 109.4 179 38.0
FvH4_5g29740 Fragaria vesca HOM05D005305 ORTHO05D006394 1.2e-21 108.6 251 33.9
A02p31660 Brassica napus HOM05D005305 ORTHO05D006394 1.5e-21 108.2 174 39.1
A08p31700 Brassica napus HOM05D005305 ORTHO05D006394 1.5e-21 108.2 204 37.3
BraA08t35092Z Brassica rapa HOM05D005305 ORTHO05D006394 1.5e-21 108.2 205 37.1
Prupe.1G566000 Prunus persica HOM05D005305 ORTHO05D006394 1.5e-21 108.2 220 35.5
CsaV3_6G037300 Cucumis sativus L. HOM05D005305 ORTHO05D006394 2.6e-21 107.5 260 32.7
BcaC07g38772 Brassica carinata HOM05D005305 ORTHO05D006394 4.4e-21 106.7 165 41.8
C08p17050 Brassica napus HOM05D005305 ORTHO05D006394 4.4e-21 106.7 165 41.8
BolC8t49330H Brassica oleracea HOM05D005305 ORTHO05D006394 4.4e-21 106.7 165 41.8
FAN13G2550 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.4e-21 106.7 225 34.2
Lalb_Chr15g0090581 Lupinus albus HOM05D005305 ORTHO05D006394 4.4e-21 106.7 163 41.1
FAN04G1743 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.7e-21 106.3 251 32.7
TAR624G0561 Trochodendron aralioides HOM05D005305 ORTHO05D006394 5.7e-21 106.3 165 38.8
COL.COLO4_22382 Corchorus olitorius HOM05D005305 ORTHO05D006394 7.5e-21 105.9 183 41.5
FAN08G2621 Fragaria x ananassa HOM05D005305 ORTHO05D006394 7.5e-21 105.9 251 33.1
Atru.chr4.616 Acer truncatum HOM05D005305 ORTHO05D006394 1.7e-20 104.8 197 35.5
ClCG09G014160 Citrullus lanatus HOM05D005305 ORTHO05D006394 3.7e-20 103.6 210 36.7
ECA248G2956 Erigeron canadensis HOM05D005305 ORTHO05D006394 3.7e-20 103.6 125 48.0
MD15G1420000 Malus domestica HOM05D005305 ORTHO05D006394 3.7e-20 103.6 254 32.3
PSO730G0002 Papaver somniferum HOM05D005305 ORTHO05D006394 4.9e-20 103.2 187 36.9
Sed0001621 Sechium edule HOM05D005305 ORTHO05D006394 6.4e-20 102.8 251 35.1
BcaB03g13072 Brassica carinata HOM05D005305 ORTHO05D006394 8.3e-20 102.4 201 36.3
Gohir.D12G092500 Gossypium hirsutum HOM05D005305 ORTHO05D006394 8.3e-20 102.4 165 41.2
Gorai.008G100000 Gossypium raimondii HOM05D005305 ORTHO05D006394 8.3e-20 102.4 165 41.2
Oeu000200.2 Olea europaea HOM05D005305 ORTHO05D006394 8.3e-20 102.4 229 36.2
BolC2t10994H Brassica oleracea HOM05D005305 ORTHO05D006394 1.4e-19 101.7 163 37.4
SalBow5G2993 Salvia bowleyana HOM05D005305 ORTHO05D006394 1.8e-19 101.3 213 31.9
Gohir.A11G210433 Gossypium hirsutum HOM05D005305 ORTHO05D006394 4.1e-19 100.1 167 40.7
RcHm_v2.0_Chr7g0223251 Rosa chinensis HOM05D005305 ORTHO05D006394 4.1e-19 100.1 242 33.1
Potri.001G306800 Populus trichocarpa HOM05D005305 ORTHO05D006394 9.2e-19 99.0 182 35.2
CiPaw.05G041500 Carya illinoinensis HOM05D005305 ORTHO05D006394 1.2e-18 98.6 178 38.2
CAN.G516.6 Capsicum annuum HOM05D005305 ORTHO05D006394 2.0e-18 97.8 200 35.0
Ciclev10001162m.g Citrus clementina HOM05D005305 ORTHO05D006394 3.5e-18 97.1 240 34.6
Sabra19G0004600 Salix brachista HOM05D005305 ORTHO05D006394 4.6e-18 96.7 179 34.1
Atru.chr6.974 Acer truncatum HOM05D005305 ORTHO05D006394 5.9e-18 96.3 195 34.4
MBI17_g24663_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 7.8e-18 95.9 231 32.5
Dinv02718 Davidia involucrata HOM05D005305 ORTHO05D006394 2.3e-17 94.4 127 42.5
Nitab4.5_0001582g0090 Nicotiana tabacum HOM05D005305 ORTHO05D006394 2.3e-17 94.4 163 39.3
QL11p019060 Quercus lobata HOM05D005305 ORTHO05D006394 2.3e-17 94.4 199 33.7
Potri.019G002300 Populus trichocarpa HOM05D005305 ORTHO05D006394 3.0e-17 94.0 168 34.5
Sc04g0009640 Simmondsia chinensis HOM05D005305 ORTHO05D006394 3.0e-17 94.0 273 33.0
PGSC0003DMG400035592 Solanum tuberosum HOM05D005305 ORTHO05D006394 3.0e-17 94.0 185 36.2
MBI17_g24510_MAGBIO Magnolia biondii HOM05D005305 ORTHO05D006394 5.0e-17 93.2 232 31.0
Solyc11g005490.1 Solanum lycopersicum HOM05D005305 ORTHO05D006394 8.6e-17 92.4 185 35.1
Sopen11g001490 Solanum pennellii HOM05D005305 ORTHO05D006394 8.6e-17 92.4 185 35.1
Thecc.01G118700 Theobroma cacao HOM05D005305 ORTHO05D006394 8.6e-17 92.4 223 35.9
AUR62005501 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.1e-16 92.0 228 32.0
Migut.L00049 Erythranthe guttata HOM05D005305 ORTHO05D006394 1.5e-16 91.7 161 35.4
Manes.12G149900 Manihot esculenta HOM05D005305 ORTHO05D006394 3.3e-16 90.5 167 38.9
Cpa.g.sc72.34 Carica papaya HOM05D005305 ORTHO05D006394 7.3e-16 89.4 162 38.3
Oeu035198.1 Olea europaea HOM05D005305 ORTHO05D006394 9.5e-16 89.0 235 31.5
DCAR_001409 Daucus carota HOM05D005305 ORTHO05D006394 1.2e-15 88.6 157 36.9
Ah.03g133360 Amaranthus hybridus HOM05D005305 ORTHO05D006394 2.8e-15 87.4 171 32.7
Nitab4.5_0002138g0070 Nicotiana tabacum HOM05D005305 ORTHO05D006394 2.8e-15 87.4 164 37.8
FAN22G2313 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.6e-15 87.0 164 36.0
TWI31G0537 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 8.0e-15 85.9 167 37.1
Manes.13G081800 Manihot esculenta HOM05D005305 ORTHO05D006394 1.1e-14 85.5 160 34.4
AUR62024239 Chenopodium quinoa HOM05D005305 ORTHO05D006394 1.4e-14 85.1 228 30.7
BraA02t08169Z Brassica rapa HOM05D005305 ORTHO05D006394 1.8e-14 84.7 163 33.7
FAN15G2678 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-14 83.2 172 33.7
unitig_32.g10686 Utricularia gibba HOM05D005305 ORTHO05D006394 8.9e-14 82.4 212 29.7
FvH4_2g02450 Fragaria vesca HOM05D005305 ORTHO05D006394 3.4e-13 80.5 172 33.1
SGA_v2.0_scaffold47G17682 Striga asiatica HOM05D005305 ORTHO05D006394 7.5e-13 79.3 234 31.6
PGR042G0513 Punica granatum HOM05D005305 ORTHO05D006394 2.2e-12 77.8 266 27.1
FvH4_2g02380 Fragaria vesca HOM05D005305 ORTHO05D006394 3.7e-12 77.0 172 32.6
FAN12G2268 Fragaria x ananassa HOM05D005305 ORTHO05D006394 4.9e-12 76.6 103 41.7
TWI79G0764 Tripterygium wilfordii HOM05D005305 ORTHO05D006394 4.9e-12 76.6 168 34.5
FvH4_4g36540 Fragaria vesca HOM05D005305 ORTHO05D006394 6.4e-12 76.3 103 41.7
FvH4_4g13350 Fragaria vesca HOM05D005305 ORTHO05D006394 3.5e-10 70.5 122 37.7
FAN05G3957 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.7e-09 68.2 104 39.4
FAN02G0608 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.3e-09 67.8 100 41.0
FAN02G4273 Fragaria x ananassa HOM05D005305 ORTHO05D006394 3.0e-09 67.4 104 40.4
FAN22G1821 Fragaria x ananassa HOM05D005305 ORTHO05D006394 1.9e-08 64.7 71 47.9
ATR0311G001 Amborella trichopoda HOM05D005305 ORTHO05D006394 5.6e-08 63.2 237 29.1
C02p49000 Brassica napus HOM05D005305 ORTHO05D006394 9.5e-08 62.4 102 39.2
FAN02G3216 Fragaria x ananassa HOM05D005305 ORTHO05D006394 9.5e-08 62.4 159 31.4
FvH4_3g08610 Fragaria vesca HOM05D005305 ORTHO05D006394 1.6e-07 61.6 102 37.3
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 2.1e-07 61.2 161 28.6
FAN11G0652 Fragaria x ananassa HOM05D005305 ORTHO05D006394 2.1e-07 61.2 100 37.0
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 4.7e-07 60.1 153 30.1
Lalb_Chr24g0393611 Lupinus albus HOM05D007205 ORTHO05D009175 4.7e-07 60.1 128 31.2
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 1.8e-06 58.2 183 30.1
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 1.8e-06 58.2 127 36.2
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 1.8e-06 58.2 157 28.0
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 3.1e-06 57.4 150 29.3
TAR381G1643 Trochodendron aralioides HOM05D005305 ORTHO05D006394 4.0e-06 57.0 142 33.1
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 4.0e-06 57.0 156 31.4
FAN20G0407 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-06 56.6 134 32.1
FAN20G1442 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-06 56.6 134 32.1
FAN20G2254 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-06 56.6 134 32.1
FAN20G2361 Fragaria x ananassa HOM05D005305 ORTHO05D006394 5.2e-06 56.6 134 32.1
C03p81290 Brassica napus HOM05D000250 ORTHO05D015314 6.8e-06 56.2 75 40.0
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 6.8e-06 56.2 160 31.2
EL10Ac6g13873 Beta vulgaris HOM05D005305 ORTHO05D006394 8.9e-06 55.8 171 30.4
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 8.9e-06 55.8 144 31.2


User provided reference genes

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