Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0294211 Helianthus annuus HOM05D000325 ORTHO05D000583 2.6e-58 228.4 108 100.0
Lj8A114G38 Lonicera japonica HOM05D000325 ORTHO05D000583 5.0e-09 64.7 61 54.1
Lsat_1_v5_gn_4_65460 Lactuca sativa HOM05D000325 ORTHO05D000583 8.5e-09 63.9 90 46.7
Dinv12911 Davidia involucrata HOM05D000325 ORTHO05D000583 1.9e-08 62.8 57 56.1
TPR.G35546 Trifolium pratense HOM05D000325 ORTHO05D000583 2.5e-08 62.4 60 50.0
Ciclev10017478m.g Citrus clementina HOM05D000325 ORTHO05D000583 3.2e-08 62.0 56 55.4
Glyma.13G298700 Glycine max HOM05D000325 ORTHO05D000583 3.2e-08 62.0 60 51.7
Nitab4.5_0000512g0220 Nicotiana tabacum HOM05D000325 ORTHO05D000583 4.2e-08 61.6 67 50.7
Atru.chr6.3014 Acer truncatum HOM05D000325 ORTHO05D000583 5.5e-08 61.2 56 55.4
Medtr2g090230 Medicago truncatula HOM05D000325 ORTHO05D000583 5.5e-08 61.2 59 54.2
Glyma.12G203000 Glycine max HOM05D000325 ORTHO05D000583 7.2e-08 60.8 60 50.0
Nitab4.5_0010785g0020 Nicotiana tabacum HOM05D000325 ORTHO05D000583 7.2e-08 60.8 67 50.7
Thecc.02G176700 Theobroma cacao HOM05D000325 ORTHO05D000583 7.2e-08 60.8 85 43.5
MELO3C013594.2 Cucumis melo HOM05D000325 ORTHO05D000583 1.2e-07 60.1 58 51.7
Eucgr.K00960 Eucalyptus grandis HOM05D000325 ORTHO05D000583 1.6e-07 59.7 82 42.7
Lj3g0021902 Lotus japonicus HOM05D000325 ORTHO05D000583 1.6e-07 59.7 56 53.6
Ca_01510_v3 Cicer arietinum L. HOM05D000325 ORTHO05D000583 2.1e-07 59.3 59 49.2
ClCG02G017510 Citrullus lanatus HOM05D000325 ORTHO05D000583 2.1e-07 59.3 60 53.3
Peaxi162Scf00132g00525 Petunia axillaris HOM05D000325 ORTHO05D000583 2.1e-07 59.3 64 51.6
TWI36G1257 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 2.1e-07 59.3 82 43.9
Lj2A562G39 Lonicera japonica HOM05D000325 ORTHO05D000583 2.7e-07 58.9 56 53.6
Nitab4.5_0003022g0070 Nicotiana tabacum HOM05D000325 ORTHO05D000583 2.7e-07 58.9 64 51.6
Cc05_g06830 Coffea canephora HOM05D000325 ORTHO05D000583 3.6e-07 58.5 75 45.3
MD09G1088800 Malus domestica HOM05D000325 ORTHO05D000583 3.6e-07 58.5 59 52.5
Cpa.g.c39805 Carica papaya HOM05D000325 ORTHO05D000583 4.7e-07 58.2 62 48.4
CsaV3_6G013060 Cucumis sativus L. HOM05D000325 ORTHO05D000583 4.7e-07 58.2 55 52.7
Peaxi162Scf02133g00014 Petunia axillaris HOM05D000325 ORTHO05D000583 4.7e-07 58.2 67 49.3
Lalb_Chr22g0356491 Lupinus albus HOM05D000325 ORTHO05D000583 6.1e-07 57.8 59 49.2
MD17G1078700 Malus domestica HOM05D000325 ORTHO05D000583 8.0e-07 57.4 59 50.8
Oeu048165.1 Olea europaea HOM05D000325 ORTHO05D000583 8.0e-07 57.4 64 46.9
arahy.Tifrunner.gnm1.ann1.BE7AXM Arachis hypogaea HOM05D000325 ORTHO05D000583 1.0e-06 57.0 52 53.8
Actinidia09870 Actinidia chinensis HOM05D000325 ORTHO05D000583 1.4e-06 56.6 54 53.7
COL.COLO4_05333 Corchorus olitorius HOM05D000325 ORTHO05D000583 1.4e-06 56.6 59 47.5
Nitab4.5_0002473g0030 Nicotiana tabacum HOM05D000325 ORTHO05D000583 1.4e-06 56.6 64 48.4
Potri.004G038600 Populus trichocarpa HOM05D000325 ORTHO05D000583 1.4e-06 56.6 84 42.9
Prupe.3G236100 Prunus persica HOM05D000325 ORTHO05D000583 1.8e-06 56.2 57 50.9
Sabra13G0114900 Salix brachista HOM05D000325 ORTHO05D000583 1.8e-06 56.2 60 51.7
VMungo1080G1319 Vigna mungo HOM05D000325 ORTHO05D000583 1.8e-06 56.2 59 47.5
Haze_13134 Corylus avellana HOM05D000325 ORTHO05D000583 3.0e-06 55.5 78 43.6
FAN09G2287 Fragaria x ananassa HOM05D000325 ORTHO05D000583 3.0e-06 55.5 51 52.9
Psat5g271600 Pisum sativum HOM05D000325 ORTHO05D000583 3.0e-06 55.5 58 48.3
RcHm_v2.0_Chr2g0162561 Rosa chinensis HOM05D000325 ORTHO05D000583 3.0e-06 55.5 51 52.9
Potri.013G135700 Populus trichocarpa HOM05D000325 ORTHO05D000583 4.0e-06 55.1 60 50.0
Sopen07g028160 Solanum pennellii HOM05D000325 ORTHO05D000583 4.0e-06 55.1 64 48.4
CAN.G248.40 Capsicum annuum HOM05D000325 ORTHO05D000583 5.2e-06 54.7 64 46.9
Hma1.2p1_2179F.1_g316220 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 5.2e-06 54.7 59 50.8
Phvul.005G105300 Phaseolus vulgaris HOM05D000325 ORTHO05D000583 5.2e-06 54.7 60 48.3
CAN.G486.9 Capsicum annuum HOM05D000325 ORTHO05D000583 6.7e-06 54.3 57 52.6
PGR142G0195 Punica granatum HOM05D000325 ORTHO05D000583 6.7e-06 54.3 56 51.8
arahy.Tifrunner.gnm1.ann1.3G9GV6 Arachis hypogaea HOM05D000325 ORTHO05D000583 8.8e-06 53.9 51 52.9
Migut.H01064 Erythranthe guttata HOM05D000325 ORTHO05D000583 8.8e-06 53.9 59 44.1
FvH4_6g45140 Fragaria vesca HOM05D000325 ORTHO05D000583 8.8e-06 53.9 51 51.0
FAN05G1220 Fragaria x ananassa HOM05D000325 ORTHO05D000583 8.8e-06 53.9 51 51.0
FAN14G0335 Fragaria x ananassa HOM05D000325 ORTHO05D000583 8.8e-06 53.9 51 51.0
Hma1.2p1_0875F.1_g231360 Hydrangea macrophylla HOM05D000325 ORTHO05D000583 8.8e-06 53.9 59 49.2


User provided reference genes

Program Settings