Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0290991 Helianthus annuus HOM05D007310 ORTHO05D002375 3.6e-104 381.7 210 100.0
ECA234G2182 Erigeron canadensis HOM05D007310 ORTHO05D002375 8.1e-56 221.1 221 63.8
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 3.9e-34 149.1 219 48.9
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 5.0e-29 132.1 207 43.5
Oeu022081.1 Olea europaea HOM05D007310 ORTHO05D002375 5.0e-29 132.1 217 42.9
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 8.4e-29 131.3 215 43.7
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 5.5e-28 128.6 213 41.3
CAN.G523.36 Capsicum annuum HOM05D007310 ORTHO05D002375 2.7e-27 126.3 213 42.7
Solyc01g105600.3 Solanum lycopersicum HOM05D007310 ORTHO05D002375 2.7e-27 126.3 211 41.2
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 6.1e-27 125.2 208 45.7
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 1.8e-26 123.6 208 40.9
Sopen01g048060 Solanum pennellii HOM05D007310 ORTHO05D002375 1.8e-26 123.6 211 40.8
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.3e-26 123.2 120 62.5
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 1.1e-25 120.9 211 40.8
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 1.5e-25 120.6 222 43.7
Nitab4.5_0000863g0020 Nicotiana tabacum HOM05D007310 ORTHO05D002375 1.3e-24 117.5 217 41.5
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 2.2e-24 116.7 132 43.2
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 2.8e-24 116.3 214 42.5
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.4e-23 114.0 221 34.8
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 4.1e-23 112.5 229 44.1
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 6.9e-23 111.7 207 37.2
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 9.0e-23 111.3 187 34.8
Lsat_1_v5_gn_5_108861 Lactuca sativa HOM05D007310 ORTHO05D002375 2.0e-22 110.2 231 42.4
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 5.9e-22 108.6 186 46.2
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 7.7e-22 108.2 157 40.1
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 1.3e-21 107.5 135 47.4
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 1.7e-21 107.1 157 39.5
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 2.2e-21 106.7 199 41.2
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 8.5e-21 104.8 135 51.9
Thecc.02G133200 Theobroma cacao HOM05D007310 ORTHO05D002375 8.5e-21 104.8 220 38.6
Manes.07G035800 Manihot esculenta HOM05D007310 ORTHO05D002375 1.4e-20 104.0 217 41.0
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 1.9e-20 103.6 123 52.8
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 4.2e-20 102.4 181 42.5
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 9.4e-20 101.3 149 51.0
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 9.4e-20 101.3 202 39.6
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 1.6e-19 100.5 140 50.0
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.7e-19 99.8 207 42.5
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 3.6e-19 99.4 140 50.0
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.3e-18 96.7 210 33.8
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 3.0e-18 96.3 118 50.8
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 3.9e-18 95.9 129 51.9
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 5.1e-18 95.5 149 47.0
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 6.7e-18 95.1 195 37.4
COL.COLO4_32323 Corchorus olitorius HOM05D007310 ORTHO05D002375 6.7e-18 95.1 211 37.0
Duzib248G0762 Durio zibethinus HOM05D007310 ORTHO05D002375 6.7e-18 95.1 180 41.1
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 6.7e-18 95.1 221 38.5
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 8.8e-18 94.7 144 45.1
Carub.0003s2834 Capsella rubella HOM05D007310 ORTHO05D002375 1.1e-17 94.4 134 40.3
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 1.1e-17 94.4 134 38.8
Cpa.g.sc42.21 Carica papaya HOM05D007310 ORTHO05D002375 1.5e-17 94.0 208 38.5
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 2.0e-17 93.6 215 38.1
AT2G14095 Arabidopsis thaliana HOM05D007310 ORTHO05D002375 2.5e-17 93.2 163 34.4
QL11p023211 Quercus lobata HOM05D007310 ORTHO05D002375 3.3e-17 92.8 165 42.4
GSVIVG01015685001 Vitis vinifera HOM05D007310 ORTHO05D002375 4.3e-17 92.4 219 34.7
CARHR104210 Cardamine hirsuta HOM05D007310 ORTHO05D002375 5.7e-17 92.0 137 37.2
MBI06_g03314_MAGBIO Magnolia biondii HOM05D007310 ORTHO05D002375 9.7e-17 91.3 207 37.2
CiPaw.06G156100 Carya illinoinensis HOM05D007310 ORTHO05D002375 1.3e-16 90.9 128 52.3
FAN15G0442 Fragaria x ananassa HOM05D007310 ORTHO05D002375 2.8e-16 89.7 182 42.9
AL3G45790 Arabidopsis lyrata HOM05D007310 ORTHO05D002375 3.7e-16 89.4 137 37.2
THA.LOC104804411 Tarenaya hassleriana HOM05D007310 ORTHO05D002375 3.7e-16 89.4 149 45.6
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 6.3e-16 88.6 122 50.0
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 6.3e-16 88.6 122 50.0
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 3.1e-15 86.3 144 41.0
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 6.9e-15 85.1 118 43.2
Phvul.002G211100 Phaseolus vulgaris HOM05D007310 ORTHO05D002375 6.9e-15 85.1 118 50.0
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 9.1e-15 84.7 164 40.9
Sp3g27450 Schrenkiella parvula HOM05D007310 ORTHO05D002375 1.5e-14 84.0 168 41.1
TAR376G0136 Trochodendron aralioides HOM05D007310 ORTHO05D002375 1.5e-14 84.0 215 37.2
BcaB08g34551 Brassica carinata HOM05D007310 ORTHO05D002375 2.0e-14 83.6 143 42.0
Sc08g0003780 Simmondsia chinensis HOM05D007310 ORTHO05D002375 2.0e-14 83.6 149 42.3
CANSAT11G0123 Cannabis sativa HOM05D007310 ORTHO05D002375 7.7e-14 81.6 113 48.7
TWI14G0938 Tripterygium wilfordii HOM05D007310 ORTHO05D002375 5.0e-13 79.0 225 35.6
Lj4g0014623 Lotus japonicus HOM05D007310 ORTHO05D002375 8.5e-13 78.2 140 45.0
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 2.5e-12 76.6 186 39.8
Sabra17G0036600 Salix brachista HOM05D007310 ORTHO05D002375 1.2e-11 74.3 112 45.5
CSS0024408 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.6e-11 73.9 102 60.8
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.7e-11 72.4 122 43.4
BcaC01g03103 Brassica carinata HOM05D007310 ORTHO05D002375 6.1e-11 72.0 208 31.7
Glyma.08G070200 Glycine max HOM05D007310 ORTHO05D002375 1.0e-10 71.2 137 44.5
Sabra17G0042000 Salix brachista HOM05D007310 ORTHO05D002375 1.0e-10 71.2 112 43.8
C03p56020 Brassica napus HOM05D007310 ORTHO05D002375 1.8e-10 70.5 214 36.0
BolC3t17888H Brassica oleracea HOM05D007310 ORTHO05D002375 1.8e-10 70.5 214 36.0
BraA03t13650Z Brassica rapa HOM05D007310 ORTHO05D002375 1.8e-10 70.5 214 32.7
PSO700G0139 Papaver somniferum HOM05D007310 ORTHO05D002375 1.8e-10 70.5 134 37.3
Thhalv10022863m.g Eutrema salsugineum HOM05D007310 ORTHO05D002375 3.0e-10 69.7 120 33.3
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 3.0e-10 69.7 112 42.0
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 3.9e-10 69.3 135 39.3
A03p45150 Brassica napus HOM05D007310 ORTHO05D002375 8.8e-10 68.2 208 33.7
CSS0048944 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 1.1e-09 67.8 64 57.8
Aa31LG8G12500 Aethionema arabicum HOM05D007310 ORTHO05D002375 2.6e-09 66.6 123 33.3
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 2.6e-09 66.6 147 31.3
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.3e-09 66.2 182 26.9
Gohir.D02G199400 Gossypium hirsutum HOM05D007310 ORTHO05D002375 1.7e-08 63.9 107 44.9
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.7e-08 63.9 197 31.0
Atru.chr6.1218 Acer truncatum HOM05D007310 ORTHO05D002375 2.2e-08 63.5 90 50.0
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.4e-07 60.8 145 37.2
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 2.4e-07 60.1 117 38.5
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 5.3e-07 58.9 112 38.4
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 7.0e-07 58.5 127 37.0
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.2e-06 57.8 111 41.4
Sed0021578 Sechium edule HOM05D007310 ORTHO05D002375 1.2e-06 57.8 105 44.8
ATR0684G111 Amborella trichopoda HOM05D007310 ORTHO05D002375 1.5e-06 57.4 109 45.0
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 1.5e-06 57.4 145 35.2
Duzib132G0922 Durio zibethinus HOM05D007310 ORTHO05D002375 2.0e-06 57.0 88 35.2
Os04g0450600 Oryza sativa ssp. japonica HOM05D021312 ORTHO05D012887 2.0e-06 57.0 135 31.9
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 5.9e-06 55.5 131 36.6
Actinidia10351 Actinidia chinensis HOM05D007310 ORTHO05D002375 7.7e-06 55.1 175 36.6


User provided reference genes

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