Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0290391 Helianthus annuus HOM05D005880 ORTHO05D007114 6.0e-61 237.7 150 100.0
HanXRQChr10g0301391 Helianthus annuus HOM05D005880 ORTHO05D007114 6.0e-61 237.7 150 100.0
ECA234G2605 Erigeron canadensis HOM05D005880 ORTHO05D007114 6.4e-47 191.0 150 68.0
Lsat_1_v5_gn_5_109301 Lactuca sativa HOM05D005880 ORTHO05D007114 4.6e-45 184.9 137 74.5
Rhsim11G0129500 Rhododendron simsii HOM05D005880 ORTHO05D007114 6.0e-37 157.9 150 56.0
Cc02_g22480 Coffea canephora HOM05D005880 ORTHO05D007114 7.9e-37 157.5 150 58.0
Duzib052G0157 Durio zibethinus HOM05D005880 ORTHO05D007114 2.3e-36 156.0 150 59.3
Hma1.2p1_0217F.1_g092030 Hydrangea macrophylla HOM05D005880 ORTHO05D007114 2.3e-36 156.0 150 57.3
CsaV3_3G018850 Cucumis sativus L. HOM05D005880 ORTHO05D007114 3.0e-36 155.6 150 58.0
Dinv24281 Davidia involucrata HOM05D005880 ORTHO05D007114 3.9e-36 155.2 148 56.8
COL.COLO4_17867 Corchorus olitorius HOM05D005880 ORTHO05D007114 8.7e-36 154.1 150 58.7
Duzib132G0062 Durio zibethinus HOM05D005880 ORTHO05D007114 1.1e-35 153.7 150 58.0
Thecc.02G038300 Theobroma cacao HOM05D005880 ORTHO05D007114 1.9e-35 152.9 150 57.3
Glyma.15G046700 Glycine max HOM05D005880 ORTHO05D007114 3.3e-35 152.1 150 57.3
Lj6g0008702 Lotus japonicus HOM05D005880 ORTHO05D007114 5.6e-35 151.4 150 56.7
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 9.6e-35 150.6 146 66.4
Medtr2g007190 Medicago truncatula HOM05D005880 ORTHO05D007114 9.6e-35 150.6 150 56.7
arahy.Tifrunner.gnm1.ann1.G2QNI1 Arachis hypogaea HOM05D005880 ORTHO05D007114 1.3e-34 150.2 150 58.0
ClCG05G009710 Citrullus lanatus HOM05D005880 ORTHO05D007114 1.6e-34 149.8 150 57.3
Gohir.A01G000600 Gossypium hirsutum HOM05D005880 ORTHO05D007114 1.6e-34 149.8 150 56.7
DCAR_029253 Daucus carota HOM05D005880 ORTHO05D007114 2.1e-34 149.4 150 54.7
Gohir.D01G000400 Gossypium hirsutum HOM05D005880 ORTHO05D007114 6.2e-34 147.9 150 56.0
Gorai.002G001000 Gossypium raimondii HOM05D005880 ORTHO05D007114 6.2e-34 147.9 150 56.0
Atru.chr6.645 Acer truncatum HOM05D005880 ORTHO05D007114 1.1e-33 147.1 150 55.3
Sed0000042 Sechium edule HOM05D005880 ORTHO05D007114 1.4e-33 146.7 150 55.3
VMungo0540G2478 Vigna mungo HOM05D005880 ORTHO05D007114 1.8e-33 146.4 150 54.7
TAR628G0071 Trochodendron aralioides HOM05D005880 ORTHO05D007114 2.4e-33 146.0 150 54.7
MD15G1423100 Malus domestica HOM05D005880 ORTHO05D007114 4.0e-33 145.2 150 52.7
Manes.07G015600 Manihot esculenta HOM05D005880 ORTHO05D007114 5.3e-33 144.8 150 54.7
GSVIVG01022927001 Vitis vinifera HOM05D005880 ORTHO05D007114 5.3e-33 144.8 150 54.0
Migut.B00838 Erythranthe guttata HOM05D005880 ORTHO05D007114 6.9e-33 144.4 150 52.0
CSS0009830 Camellia sinensis var. sinensis HOM05D005880 ORTHO05D007114 1.5e-32 143.3 150 56.0
Cpa.g.sc113.61 Carica papaya HOM05D005880 ORTHO05D007114 1.5e-32 143.3 150 52.0
PGSC0003DMG400023792 Solanum tuberosum HOM05D005880 ORTHO05D007114 1.5e-32 143.3 151 53.0
TPR.G23065 Trifolium pratense HOM05D005880 ORTHO05D007114 2.0e-32 142.9 150 66.0
CSS0048748 Camellia sinensis var. sinensis HOM05D005880 ORTHO05D007114 3.4e-32 142.1 140 58.6
Manes.10G129200 Manihot esculenta HOM05D005880 ORTHO05D007114 3.4e-32 142.1 150 52.0
Sopen01g046630 Solanum pennellii HOM05D005880 ORTHO05D007114 3.4e-32 142.1 151 52.3
Nitab4.5_0010062g0030 Nicotiana tabacum HOM05D005880 ORTHO05D007114 4.5e-32 141.7 152 52.6
Phvul.006G214500 Phaseolus vulgaris HOM05D005880 ORTHO05D007114 5.8e-32 141.4 150 52.7
TWI59G1122 Tripterygium wilfordii HOM05D005880 ORTHO05D007114 5.8e-32 141.4 150 56.7
CSS0021530 Camellia sinensis var. sinensis HOM05D005880 ORTHO05D007114 7.6e-32 141.0 150 55.3
PGR042G3410 Punica granatum HOM05D005880 ORTHO05D007114 9.9e-32 140.6 150 55.3
SGA_v2.0_scaffold1G00307 Striga asiatica HOM05D002729 ORTHO05D003163 9.9e-32 140.6 145 49.7
Ciclev10002788m.g Citrus clementina HOM05D005880 ORTHO05D007114 1.3e-31 140.2 150 52.7
Solyc01g104190.2 Solanum lycopersicum HOM05D005880 ORTHO05D007114 1.3e-31 140.2 151 52.3
Haze_01670 Corylus avellana HOM05D005880 ORTHO05D007114 1.7e-31 139.8 150 53.3
TAR376G0254 Trochodendron aralioides HOM05D005880 ORTHO05D007114 1.7e-31 139.8 150 50.7
Aqoxy6G00184 Aquilegia oxysepala HOM05D005880 ORTHO05D007114 2.2e-31 139.4 152 50.0
MD08G1229100 Malus domestica HOM05D005880 ORTHO05D007114 2.2e-31 139.4 150 52.7
Potri.006G003600 Populus trichocarpa HOM05D005880 ORTHO05D007114 2.2e-31 139.4 150 52.7
RcHm_v2.0_Chr7g0222451 Rosa chinensis HOM05D005880 ORTHO05D007114 2.2e-31 139.4 150 52.7
FvH4_5g29530 Fragaria vesca HOM05D005880 ORTHO05D007114 6.4e-31 137.9 150 53.3
CiPaw.06G147400 Carya illinoinensis HOM05D005880 ORTHO05D007114 1.4e-30 136.7 142 52.8
CiPaw.05G044300 Carya illinoinensis HOM05D005880 ORTHO05D007114 1.9e-30 136.3 150 52.7
Sabra16G0009100 Salix brachista HOM05D005880 ORTHO05D007114 1.9e-30 136.3 150 51.3
CANSAT54G2878 Cannabis sativa HOM05D005880 ORTHO05D007114 5.5e-30 134.8 150 56.7
Prupe.1G568400 Prunus persica HOM05D005880 ORTHO05D007114 5.5e-30 134.8 140 54.3
FAN18G2654 Fragaria x ananassa HOM05D005880 ORTHO05D007114 1.2e-29 133.7 140 52.9
Ah.04g161590 Amaranthus hybridus HOM05D005880 ORTHO05D007114 1.6e-29 133.3 150 50.7
FAN08G1303 Fragaria x ananassa HOM05D005880 ORTHO05D007114 1.6e-29 133.3 146 50.7
CSS0016002 Camellia sinensis var. sinensis HOM05D005880 ORTHO05D007114 2.7e-29 132.5 151 66.2
FAN04G0122 Fragaria x ananassa HOM05D005880 ORTHO05D007114 3.5e-29 132.1 140 52.1
Peaxi162Scf00011g00326 Petunia axillaris HOM05D005880 ORTHO05D007114 3.5e-29 132.1 155 50.3
CAN.G1577.17 Capsicum annuum HOM05D005880 ORTHO05D007114 4.6e-29 131.7 146 50.0
Aa31LG2G9680 Aethionema arabicum HOM05D005880 ORTHO05D007114 7.9e-29 131.0 150 54.0
Potri.016G004300 Populus trichocarpa HOM05D005880 ORTHO05D007114 1.0e-28 130.6 150 49.3
AL2G15640 Arabidopsis lyrata HOM05D005880 ORTHO05D007114 1.8e-28 129.8 150 53.3
QL11p018494 Quercus lobata HOM05D005880 ORTHO05D007114 2.3e-28 129.4 149 51.0
Sc16g0012020 Simmondsia chinensis HOM05D005880 ORTHO05D007114 3.0e-28 129.0 150 59.3
Nitab4.5_0002245g0020 Nicotiana tabacum HOM05D005880 ORTHO05D007114 8.7e-28 127.5 152 48.7
Sabra16G0009300 Salix brachista HOM05D005880 ORTHO05D007114 8.7e-28 127.5 142 49.3
EL10Ac4g10345 Beta vulgaris HOM05D005880 ORTHO05D007114 2.5e-27 125.9 150 53.3
Thhalv10023746m.g Eutrema salsugineum HOM05D005880 ORTHO05D007114 2.5e-27 125.9 150 52.0
Oeu045943.1 Olea europaea HOM05D005880 ORTHO05D007114 4.3e-27 125.2 132 50.8
BcaB07g31236 Brassica carinata HOM05D005880 ORTHO05D007114 5.6e-27 124.8 150 51.3
AT1G60870 Arabidopsis thaliana HOM05D005880 ORTHO05D007114 7.4e-27 124.4 150 51.3
Nn5g28217 Nelumbo nucifera HOM05D005880 ORTHO05D007114 9.6e-27 124.0 146 45.9
BcaC04g22278 Brassica carinata HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 51.3
A09p17170 Brassica napus HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 51.3
C09p21370 Brassica napus HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 51.3
BolC9t55037H Brassica oleracea HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 51.3
BraA09t37350Z Brassica rapa HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 51.3
THA.LOC104819299 Tarenaya hassleriana HOM05D005880 ORTHO05D007114 1.3e-26 123.6 150 50.7
Carub.0002s0442 Capsella rubella HOM05D005880 ORTHO05D007114 1.6e-26 123.2 150 51.3
Eucgr.G00579 Eucalyptus grandis HOM05D005880 ORTHO05D007114 1.6e-26 123.2 150 48.0
Nn1g08723 Nelumbo nucifera HOM05D005880 ORTHO05D007114 2.8e-26 122.5 137 48.2
Sp2g03790 Schrenkiella parvula HOM05D005880 ORTHO05D007114 3.7e-26 122.1 150 50.7
AUR62000032 Chenopodium quinoa HOM05D005880 ORTHO05D007114 6.2e-26 121.3 150 53.3
CARHR051910 Cardamine hirsuta HOM05D005880 ORTHO05D007114 1.1e-25 120.6 150 50.7
Gohir.A03G211800 Gossypium hirsutum HOM05D005880 ORTHO05D007114 1.8e-25 119.8 151 48.3
Actinidia26146 Actinidia chinensis HOM05D005880 ORTHO05D007114 3.1e-25 119.0 117 55.6
Gohir.D02G233200 Gossypium hirsutum HOM05D005880 ORTHO05D007114 6.9e-25 117.9 151 47.7
Gorai.005G261100 Gossypium raimondii HOM05D005880 ORTHO05D007114 6.9e-25 117.9 151 47.7
Gohir.A08G134100 Gossypium hirsutum HOM05D005880 ORTHO05D007114 3.4e-24 115.5 129 49.6
Psat1g224760 Pisum sativum HOM05D005880 ORTHO05D007114 1.3e-23 113.6 119 51.3
Ah.06g193070 Amaranthus hybridus HOM05D005880 ORTHO05D007114 1.7e-23 113.2 125 52.8
arahy.Tifrunner.gnm1.ann1.MS6DZN Arachis hypogaea HOM05D005880 ORTHO05D007114 1.7e-23 113.2 121 51.2
TWI23G0568 Tripterygium wilfordii HOM05D005880 ORTHO05D007114 4.9e-23 111.7 150 47.3
Sed0012668 Sechium edule HOM05D005880 ORTHO05D007114 1.4e-22 110.2 151 49.7
CiPaw.04G102300 Carya illinoinensis HOM05D005880 ORTHO05D007114 6.0e-21 104.8 114 49.1
PSO528G0075 Papaver somniferum HOM05D005880 ORTHO05D007114 7.9e-21 104.4 151 41.1
arahy.Tifrunner.gnm1.ann1.59Y12W Arachis hypogaea HOM05D000161 ORTHO05D007114 1.3e-20 103.6 122 51.6
arahy.Tifrunner.gnm1.ann1.JTZ9FV Arachis hypogaea HOM05D005880 ORTHO05D007114 1.8e-20 103.2 121 51.2
arahy.Tifrunner.gnm1.ann1.IQ7NU0 Arachis hypogaea HOM05D005880 ORTHO05D007114 3.0e-20 102.4 121 51.2
arahy.Tifrunner.gnm1.ann1.REH2VN Arachis hypogaea HOM05D005880 ORTHO05D007114 3.0e-20 102.4 121 51.2
Lalb_Chr15g0090661 Lupinus albus HOM05D005880 ORTHO05D007114 3.0e-20 102.4 121 50.4
CANSAT35G1534 Cannabis sativa HOM05D005880 ORTHO05D007114 5.1e-20 101.7 112 47.3
Phvul.002G250100 Phaseolus vulgaris HOM05D005880 ORTHO05D007114 1.1e-19 100.5 151 45.7
MBI06_g20717_MAGBIO Magnolia biondii HOM05D005880 ORTHO05D007114 1.5e-19 100.1 145 40.7
FAN13G3279 Fragaria x ananassa HOM05D005880 ORTHO05D007114 5.7e-19 98.2 117 47.0
arahy.Tifrunner.gnm1.ann1.BDEX7B Arachis hypogaea HOM05D005880 ORTHO05D007114 1.3e-18 97.1 111 50.5
CANSAT21G1779 Cannabis sativa HOM05D005880 ORTHO05D007114 2.8e-18 95.9 111 47.7
arahy.Tifrunner.gnm1.ann1.90JL3B Arachis hypogaea HOM05D005880 ORTHO05D007114 6.3e-18 94.7 118 49.2
Gohir.A02G126300 Gossypium hirsutum HOM05D005880 ORTHO05D007114 1.0e-15 87.4 65 67.7
CDE08G1156 Ceratophyllum demersum HOM05D005880 ORTHO05D007114 1.3e-15 87.0 150 34.7
AUR62019202 Chenopodium quinoa HOM05D005880 ORTHO05D007114 8.5e-15 84.3 121 51.2
VMungo0251G0848 Vigna mungo HOM05D005880 ORTHO05D007114 8.5e-15 84.3 151 39.1
Lsat_1_v5_gn_5_89321 Lactuca sativa HOM05D005880 ORTHO05D007114 5.5e-14 81.6 89 52.8
CAN.G1577.19 Capsicum annuum HOM05D005880 ORTHO05D007114 9.3e-14 80.9 62 69.4
SalBow5G4729 Salvia bowleyana HOM05D005880 ORTHO05D007114 2.7e-13 79.3 64 59.4
Dinv19366 Davidia involucrata HOM05D005880 ORTHO05D007114 4.3e-11 72.0 59 59.3
arahy.Tifrunner.gnm1.ann1.3M3641 Arachis hypogaea HOM05D005880 ORTHO05D007114 5.7e-11 71.6 61 59.0
arahy.Tifrunner.gnm1.ann1.05MEX4 Arachis hypogaea HOM05D005880 ORTHO05D007114 2.8e-10 69.3 61 57.4
MELO3C019478.2 Cucumis melo HOM05D005880 ORTHO05D007114 1.4e-09 67.0 60 63.3
ATR0794G127 Amborella trichopoda HOM05D005880 ORTHO05D007114 1.8e-09 66.6 134 34.3
SalBow1G5664 Salvia bowleyana HOM05D005880 ORTHO05D007114 1.1e-06 57.4 59 45.8
Oeu025682.1 Olea europaea HOM05D005880 ORTHO05D007114 1.9e-06 56.6 92 38.0


User provided reference genes

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