Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.1e-44 183.0 97 100.0
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 5.8e-41 170.6 97 94.8
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 9.0e-34 146.7 94 83.0
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.3e-29 132.1 91 73.6
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 6.7e-29 130.6 95 70.5
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 8.7e-29 130.2 94 71.3
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 1.5e-28 129.4 91 72.5
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 1.5e-28 129.4 91 72.5
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 3.3e-28 128.3 97 71.1
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 3.3e-28 128.3 97 70.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.3e-27 126.3 92 70.7
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 2.8e-27 125.2 92 69.6
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 6.2e-27 124.0 94 68.1
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 1.4e-26 122.9 94 67.0
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 2.4e-26 122.1 88 70.5
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 3.1e-26 121.7 91 69.2
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 4.0e-26 121.3 95 66.3
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 5.3e-26 120.9 95 66.3
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 5.3e-26 120.9 95 67.4
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.9e-26 120.6 94 67.0
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.9e-26 120.6 94 67.0
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 6.9e-26 120.6 91 69.2
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 6.9e-26 120.6 94 66.0
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 9.0e-26 120.2 95 67.4
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.5e-25 119.4 94 66.0
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 1.5e-25 119.4 91 65.9
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 1.5e-25 119.4 91 68.1
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 1.5e-25 119.4 94 67.0
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 2.0e-25 119.0 97 64.9
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 2.0e-25 119.0 94 66.0
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 3.4e-25 118.2 89 69.7
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 4.5e-25 117.9 85 71.8
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 5.8e-25 117.5 88 69.3
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 9.9e-25 116.7 92 67.4
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 9.9e-25 116.7 92 67.4
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 9.9e-25 116.7 91 64.8
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 9.9e-25 116.7 88 68.2
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 1.7e-24 115.9 92 62.0
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 1.7e-24 115.9 90 66.7
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 1.7e-24 115.9 88 67.0
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 2.2e-24 115.5 91 63.7
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 2.2e-24 115.5 91 64.8
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 2.9e-24 115.2 87 69.0
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 2.9e-24 115.2 92 67.4
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 2.9e-24 115.2 92 67.4
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 2.9e-24 115.2 92 66.3
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 6.4e-24 114.0 92 67.4
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 8.4e-24 113.6 91 63.7
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 8.4e-24 113.6 89 61.8
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 1.1e-23 113.2 97 60.8
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.1e-23 113.2 86 65.1
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 1.1e-23 113.2 85 67.1
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.1e-23 113.2 82 69.5
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 1.1e-23 113.2 82 69.5
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 1.9e-23 112.5 87 64.4
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 1.9e-23 112.5 86 68.6
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 2.4e-23 112.1 95 62.1
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 3.2e-23 111.7 91 62.6
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 3.2e-23 111.7 81 71.6
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 4.2e-23 111.3 88 64.8
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 4.2e-23 111.3 94 60.6
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 4.2e-23 111.3 94 60.6
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 4.2e-23 111.3 86 65.1
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 4.2e-23 111.3 92 63.0
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 4.2e-23 111.3 86 69.8
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 4.2e-23 111.3 91 62.6
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 5.5e-23 110.9 91 62.6
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 7.1e-23 110.5 92 63.0
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 9.3e-23 110.2 90 63.3
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 1.2e-22 109.8 88 64.8
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-22 109.8 75 73.3
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 1.6e-22 109.4 85 65.9
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 2.1e-22 109.0 92 62.0
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 3.5e-22 108.2 91 62.6
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 7.9e-22 107.1 91 59.3
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 1.3e-21 106.3 83 66.3
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 1.3e-21 106.3 83 66.3
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.3e-21 106.3 86 67.4
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 1.3e-21 106.3 86 66.3
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.8e-21 105.9 80 66.2
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 3.9e-21 104.8 75 69.3
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 3.9e-21 104.8 83 63.9
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 3.9e-21 104.8 89 61.8
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 5.1e-21 104.4 79 68.4
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 5.1e-21 104.4 77 64.9
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 5.1e-21 104.4 78 69.2
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 6.7e-21 104.0 84 66.7
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 6.7e-21 104.0 84 66.7
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 6.7e-21 104.0 78 67.9
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 8.7e-21 103.6 91 64.8
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 8.7e-21 103.6 84 66.7
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 1.5e-20 102.8 84 65.5
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 1.5e-20 102.8 86 65.1
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.9e-20 102.4 78 66.7
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 1.9e-20 102.4 91 63.7
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 2.5e-20 102.1 84 61.9
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 9.6e-20 100.1 91 63.7
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 2.4e-18 95.5 79 60.8
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 5.3e-18 94.4 77 64.9
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.5e-17 92.8 72 62.5
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 2.0e-17 92.4 68 70.6
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 5.8e-17 90.9 72 63.9
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.0e-16 90.1 85 52.9
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 4.9e-16 87.8 69 65.2
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 6.5e-16 87.4 60 70.0
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 4.2e-15 84.7 86 57.0
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 3.5e-14 81.6 72 59.7
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 4.6e-14 81.3 77 61.0
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 3.0e-13 78.6 66 66.7
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 9.0e-10 67.0 42 78.6


User provided reference genes

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