Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 0.0e+00 1095.1 525 100.0
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.0e-288 996.1 525 90.5
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 4.4e-276 954.1 520 87.1
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 1.7e-227 792.7 503 74.2
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 1.9e-226 789.3 509 73.5
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 3.9e-224 781.6 522 71.6
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.5e-223 779.6 522 71.6
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 2.5e-223 778.9 497 73.8
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.6e-223 777.7 522 71.1
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.6e-223 777.7 522 71.1
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 9.6e-223 776.9 509 71.9
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.6e-222 776.2 509 71.7
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 1.1e-221 773.5 505 71.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.4e-221 773.1 509 71.7
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.8e-221 772.7 509 72.3
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.4e-221 772.3 507 72.0
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 3.1e-221 771.9 494 72.5
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.1e-221 771.9 522 71.1
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.1e-221 771.9 497 72.6
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.6e-220 768.8 534 69.7
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 5.8e-220 767.7 508 70.9
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.3e-219 766.5 488 74.2
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.2e-219 765.8 525 70.1
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 8.4e-219 763.8 505 70.9
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.1e-218 763.5 516 72.1
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 1.4e-218 763.1 517 71.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 1.9e-218 762.7 513 70.8
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.9e-218 762.7 505 70.3
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 2.4e-218 762.3 522 69.7
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 3.2e-218 761.9 511 69.5
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 3.2e-218 761.9 509 72.1
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 7.1e-218 760.8 512 70.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.7e-217 758.8 491 72.7
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.5e-217 758.4 510 70.4
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.0e-216 756.9 497 71.8
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.7e-216 756.1 497 71.8
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.7e-216 756.1 513 69.4
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 6.6e-216 754.2 534 67.6
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 6.6e-216 754.2 494 71.5
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 8.7e-216 753.8 449 77.5
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 8.7e-216 753.8 498 72.3
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.5e-215 753.1 510 70.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 3.3e-215 751.9 506 70.2
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 9.6e-215 750.4 506 70.8
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.8e-214 748.0 483 72.0
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.1e-213 746.9 507 69.2
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 1.1e-213 746.9 497 70.0
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.4e-213 745.7 505 70.9
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 7.6e-212 740.7 502 70.7
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 2.9e-211 738.8 518 68.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.9e-210 736.1 513 69.2
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 5.5e-210 734.6 517 69.2
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 2.1e-209 732.6 508 67.5
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 3.5e-209 731.9 497 69.2
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 6.0e-209 731.1 575 61.9
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 1.3e-208 729.9 512 69.1
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 2.3e-208 729.2 496 69.4
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 2.3e-208 729.2 496 69.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.5e-207 726.5 494 68.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 2.8e-206 722.2 513 67.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 2.4e-205 719.2 506 66.0
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 4.0e-205 718.4 495 68.7
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 9.0e-205 717.2 511 67.1
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 9.0e-205 717.2 520 68.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 1.2e-204 716.8 525 64.0
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 2.6e-204 715.7 508 67.3
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 3.4e-204 715.3 522 64.2
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 3.4e-204 715.3 515 65.8
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 4.5e-204 714.9 504 66.3
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 1.0e-203 713.8 506 66.2
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 1.0e-203 713.8 512 66.8
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.0e-203 713.8 502 66.1
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 1.3e-203 713.4 502 65.9
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 1.3e-203 713.4 502 65.9
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.2e-203 712.6 506 65.4
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 2.2e-203 712.6 502 65.7
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.9e-203 712.2 522 64.8
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 4.9e-203 711.4 502 65.5
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 6.5e-203 711.1 524 64.9
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.4e-202 709.9 512 68.0
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.2e-201 706.8 517 65.2
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 5.1e-200 701.4 530 64.2
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 2.5e-199 699.1 436 74.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 1.6e-198 696.4 534 63.3
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.8e-198 695.7 523 63.3
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 3.7e-198 695.3 532 63.2
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 5.3e-197 691.4 531 63.1
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 3.8e-195 685.3 533 63.0
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.2e-194 682.2 501 65.7
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 7.7e-188 661.0 497 65.6
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 3.9e-184 648.7 430 71.2
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.8e-181 639.8 496 61.5
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.2e-179 632.9 505 61.2
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 3.8e-179 632.1 516 60.9
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.1e-175 620.5 353 79.9
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 2.0e-175 619.8 524 56.9
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.4e-175 618.6 516 61.0
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 7.0e-173 611.3 503 58.1
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 1.7e-171 606.7 487 59.5
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.1e-169 599.7 508 57.9
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 2.4e-165 586.3 410 67.6
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 1.6e-156 557.0 419 64.0
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 1.3e-123 447.6 449 51.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.5e-122 444.1 401 53.6
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.1e-120 438.0 422 52.1
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.6e-113 414.1 409 51.1
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 4.4e-111 406.0 263 70.7
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 4.6e-108 396.0 402 48.5
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 1.4e-64 251.5 162 69.1
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 3.1e-64 250.4 173 69.4
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 9.7e-50 202.2 120 76.7
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 7.0e-40 169.5 112 72.3
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 7.2e-37 159.5 341 29.3
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.7e-25 120.6 125 51.2
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 4.1e-16 90.5 82 48.8
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.3e-14 85.5 57 64.9
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.7e-09 68.6 71 43.7
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 7.1e-08 63.2 58 44.8
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 3.5e-07 60.8 99 29.3


User provided reference genes

Program Settings