Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 2.4e-99 365.5 188 100.0
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 3.4e-21 105.9 231 35.1
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 3.0e-17 92.8 227 33.0
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.0e-14 82.4 142 40.8
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 4.0e-14 82.4 113 43.4
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 2.6e-13 79.7 112 43.8
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 5.8e-13 78.6 164 32.3
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 3.8e-12 75.9 164 34.1
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 4.9e-12 75.5 138 37.0
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.1e-11 74.3 140 34.3
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 1.4e-11 73.9 213 31.5
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 1.9e-11 73.6 138 36.2
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 5.4e-11 72.0 77 48.1
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 5.4e-11 72.0 77 46.8
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 9.3e-11 71.2 177 32.8
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 9.3e-11 71.2 140 34.3
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 1.2e-10 70.9 77 45.5
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 1.2e-10 70.9 99 40.4
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 1.2e-10 70.9 79 45.6
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 1.6e-10 70.5 140 34.3
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 1.6e-10 70.5 140 34.3
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 2.7e-10 69.7 89 43.8
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 3.5e-10 69.3 76 47.4
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 7.9e-10 68.2 195 30.3
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 1.0e-09 67.8 134 35.1
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 1.3e-09 67.4 103 39.8
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.3e-09 67.4 77 44.2
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 1.8e-09 67.0 140 37.9
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 2.3e-09 66.6 136 33.8
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 2.3e-09 66.6 141 33.3
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 3.0e-09 66.2 141 34.0
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 3.0e-09 66.2 140 36.4
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 3.9e-09 65.9 81 37.0
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 3.9e-09 65.9 117 35.9
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 6.7e-09 65.1 77 42.9
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 6.7e-09 65.1 141 33.3
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 8.7e-09 64.7 136 31.6
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-08 64.3 175 31.4
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.1e-08 64.3 77 44.2
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 1.1e-08 64.3 143 33.6
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 1.5e-08 63.9 113 34.5
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 1.5e-08 63.9 77 40.3
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 2.5e-08 63.2 174 33.9
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 2.5e-08 63.2 118 36.4
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 2.5e-08 63.2 92 38.0
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.3e-08 62.8 94 37.2
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 3.3e-08 62.8 94 37.2
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 4.3e-08 62.4 79 41.8
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 5.6e-08 62.0 139 37.4
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 5.6e-08 62.0 77 42.9
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 7.4e-08 61.6 141 34.0
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.4e-08 61.6 142 36.6
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 1.3e-07 60.8 142 28.9
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 2.8e-07 59.7 150 34.0
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 3.7e-07 59.3 135 31.9
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 4.8e-07 58.9 81 40.7
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 4.8e-07 58.9 77 41.6
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 8.1e-07 58.2 86 38.4
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 6.9e-06 55.1 81 40.7


User provided reference genes

Program Settings