Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0286001 Helianthus annuus HOM05D004197 ORTHO05D004975 1.2e-64 249.6 122 100.0
ECA240G1468 Erigeron canadensis HOM05D004197 ORTHO05D004975 1.6e-59 232.6 120 93.3
ECA247G1539 Erigeron canadensis HOM05D004197 ORTHO05D004975 2.0e-59 232.3 120 93.3
Lsat_1_v5_gn_6_33001 Lactuca sativa HOM05D004197 ORTHO05D004975 7.8e-59 230.3 120 92.5
Lsat_1_v5_gn_5_190681 Lactuca sativa HOM05D004197 ORTHO05D004975 1.2e-56 223.0 120 88.3
Cc02_g26370 Coffea canephora HOM05D004197 ORTHO05D004975 1.8e-55 219.2 120 85.0
Cc03_g14030 Coffea canephora HOM05D004197 ORTHO05D004975 4.4e-54 214.5 120 85.8
Gorai.011G136700 Gossypium raimondii HOM05D004197 ORTHO05D004975 9.8e-54 213.4 122 83.6
Gohir.A10G143100 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 85.0
Gorai.012G053000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 85.0
Oeu016610.1 Olea europaea HOM05D004197 ORTHO05D004975 1.3e-53 213.0 120 82.5
SalBow6G6028 Salvia bowleyana HOM05D004197 ORTHO05D004975 2.2e-53 212.2 119 85.7
Gohir.A05G367700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 3.7e-53 211.5 120 84.2
Gohir.D10G123800 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.9e-53 211.1 120 84.2
Thecc.04G166300 Theobroma cacao HOM05D004197 ORTHO05D004975 4.9e-53 211.1 120 83.3
Gohir.D04G047600 Gossypium hirsutum HOM05D004197 ORTHO05D004975 6.4e-53 210.7 120 84.2
Hma1.2p1_0307F.1_g119895 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 6.4e-53 210.7 120 84.2
Atru.chr12.1293 Acer truncatum HOM05D004197 ORTHO05D004975 8.3e-53 210.3 120 82.5
Duzib212G0574 Durio zibethinus HOM05D004197 ORTHO05D004975 8.3e-53 210.3 120 83.3
Aa31LG10G13940 Aethionema arabicum HOM05D004197 ORTHO05D004975 1.1e-52 209.9 120 83.3
MSTRG.27564 Avicennia marina HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 83.3
Duzib151G0052 Durio zibethinus HOM05D004197 ORTHO05D004975 1.4e-52 209.5 120 82.5
CARHR170020 Cardamine hirsuta HOM05D004197 ORTHO05D004975 3.2e-52 208.4 120 83.3
Rhsim03G0176800 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.2e-52 208.4 118 83.9
TWI32G1250 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 3.2e-52 208.4 120 83.3
AL5G41720 Arabidopsis lyrata HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 83.3
Carub.0005s2637 Capsella rubella HOM05D004197 ORTHO05D004975 4.1e-52 208.0 120 83.3
Atru.chr4.2919 Acer truncatum HOM05D004197 ORTHO05D004975 5.4e-52 207.6 120 81.7
AT3G59650 Arabidopsis thaliana HOM05D004197 ORTHO05D004975 5.4e-52 207.6 120 82.5
Migut.F01587 Erythranthe guttata HOM05D004197 ORTHO05D004975 5.4e-52 207.6 120 84.2
Dinv33200 Davidia involucrata HOM05D004197 ORTHO05D004975 7.0e-52 207.2 117 83.8
CAN.G525.23 Capsicum annuum HOM05D004197 ORTHO05D004975 9.2e-52 206.8 120 82.5
CiPaw.11G096400 Carya illinoinensis HOM05D004197 ORTHO05D004975 9.2e-52 206.8 120 81.7
Nitab4.5_0007872g0010 Nicotiana tabacum HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 81.7
PSO832G1844 Papaver somniferum HOM05D004197 ORTHO05D004975 1.2e-51 206.5 118 83.9
Peaxi162Scf00196g00222 Petunia axillaris HOM05D004197 ORTHO05D004975 1.2e-51 206.5 120 80.8
Cpa.g.sc10.180 Carica papaya HOM05D004197 ORTHO05D004975 2.0e-51 205.7 120 82.5
CSS0039414 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.7e-51 205.3 120 80.8
CSS0047181 Camellia sinensis var. sinensis HOM05D004197 ORTHO05D004975 2.7e-51 205.3 120 80.8
BcaC07g40496 Brassica carinata HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 82.5
A09p51920 Brassica napus HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 82.5
C08p34650 Brassica napus HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 82.5
BolC8t51067H Brassica oleracea HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 82.5
BraA09t40628Z Brassica rapa HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 82.5
THA.LOC104804007 Tarenaya hassleriana HOM05D004197 ORTHO05D004975 4.6e-51 204.5 120 81.7
BcaC08g44998 Brassica carinata HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
A07p24720 Brassica napus HOM05D000455 ORTHO05D000434 6.0e-51 204.1 120 82.5
C06p26290 Brassica napus HOM05D000455 ORTHO05D000434 6.0e-51 204.1 120 82.5
BolC6t37793H Brassica oleracea HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
BraA07t30117Z Brassica rapa HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
Thhalv10006316m.g Eutrema salsugineum HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
Nitab4.5_0000902g0310 Nicotiana tabacum HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 80.8
Sp5g03530 Schrenkiella parvula HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
GSVIVG01038138001 Vitis vinifera HOM05D004197 ORTHO05D004975 6.0e-51 204.1 120 82.5
BcaB02g07455 Brassica carinata HOM05D004197 ORTHO05D004975 7.8e-51 203.8 120 82.5
Hund04335 Selenicereus undatus HOM05D004197 ORTHO05D004975 7.8e-51 203.8 120 79.2
Eucgr.G02225 Eucalyptus grandis HOM05D004197 ORTHO05D004975 1.0e-50 203.4 120 80.0
Ah.13g073520 Amaranthus hybridus HOM05D004197 ORTHO05D004975 1.3e-50 203.0 120 80.8
PSO017G5565 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 82.2
PSO675G0737 Papaver somniferum HOM05D004197 ORTHO05D004975 1.3e-50 203.0 118 82.2
AUR62023799 Chenopodium quinoa HOM05D004197 ORTHO05D004975 2.3e-50 202.2 120 80.0
Nn1g09691 Nelumbo nucifera HOM05D004197 ORTHO05D004975 2.3e-50 202.2 120 78.3
CDE02G1869 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 3.0e-50 201.8 118 80.5
PGR142G4086 Punica granatum HOM05D004197 ORTHO05D004975 3.9e-50 201.4 120 80.8
Solyc04g014390.3 Solanum lycopersicum HOM05D004197 ORTHO05D004975 3.9e-50 201.4 120 80.0
Sopen04g006520 Solanum pennellii HOM05D004197 ORTHO05D004975 3.9e-50 201.4 120 80.0
CANSAT80G2644 Cannabis sativa HOM05D004197 ORTHO05D004975 6.6e-50 200.7 120 79.2
MELO3C017759.2 Cucumis melo HOM05D004197 ORTHO05D004975 6.6e-50 200.7 120 78.3
EL10Ac6g15364 Beta vulgaris HOM05D004197 ORTHO05D004975 1.1e-49 199.9 120 78.3
Glyma.05G102000 Glycine max HOM05D004197 ORTHO05D004975 1.1e-49 199.9 115 82.6
Manes.06G021100 Manihot esculenta HOM05D004197 ORTHO05D004975 1.1e-49 199.9 120 78.3
CiPaw.12G066300 Carya illinoinensis HOM05D004197 ORTHO05D004975 1.5e-49 199.5 120 77.5
FvH4_7g06200 Fragaria vesca HOM05D004197 ORTHO05D004975 1.5e-49 199.5 120 80.8
arahy.Tifrunner.gnm1.ann1.4JR04K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-49 199.1 120 80.0
arahy.Tifrunner.gnm1.ann1.5DCW4K Arachis hypogaea HOM05D004197 ORTHO05D004975 1.9e-49 199.1 120 80.0
RcHm_v2.0_Chr1g0333831 Rosa chinensis HOM05D004197 ORTHO05D004975 1.9e-49 199.1 120 80.0
ATR0733G162 Amborella trichopoda HOM05D004197 ORTHO05D004975 2.5e-49 198.7 120 79.2
Glyma.17G164900 Glycine max HOM05D004197 ORTHO05D004975 2.5e-49 198.7 115 81.7
Phvul.003G238300 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 2.5e-49 198.7 118 79.7
arahy.Tifrunner.gnm1.ann1.E9H45Q Arachis hypogaea HOM05D004197 ORTHO05D004975 3.3e-49 198.4 118 80.5
Os03g0207250 Oryza sativa ssp. japonica HOM05D004197 ORTHO05D004975 3.3e-49 198.4 120 79.2
FAN01G1948 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-49 198.0 120 80.0
FAN06G1493 Fragaria x ananassa HOM05D004197 ORTHO05D004975 4.3e-49 198.0 120 80.0
Prupe.1G206900 Prunus persica HOM05D004197 ORTHO05D004975 5.6e-49 197.6 120 80.8
PGSC0003DMG401023624 Solanum tuberosum HOM05D004197 ORTHO05D004975 5.6e-49 197.6 120 79.2
VMungo0251G3068 Vigna mungo HOM05D004197 ORTHO05D004975 5.6e-49 197.6 118 79.7
Lalb_Chr04g0253841 Lupinus albus HOM05D004197 ORTHO05D004975 7.3e-49 197.2 120 79.2
PSO591G0183 Papaver somniferum HOM05D004197 ORTHO05D004975 7.3e-49 197.2 118 79.7
FAN03G3355 Fragaria x ananassa HOM05D004197 ORTHO05D004975 9.5e-49 196.8 120 79.2
Ciclev10022904m.g Citrus clementina HOM05D004197 ORTHO05D004975 1.2e-48 196.4 120 76.7
Ca_10539_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 1.6e-48 196.1 118 78.0
MD08G1230600 Malus domestica HOM05D004197 ORTHO05D004975 1.6e-48 196.1 121 78.5
Potri.013G126200 Populus trichocarpa HOM05D004197 ORTHO05D004975 1.6e-48 196.1 120 75.8
Ca_23424_v3 Cicer arietinum L. HOM05D004197 ORTHO05D004975 2.1e-48 195.7 118 78.8
QL10p055721 Quercus lobata HOM05D004197 ORTHO05D004975 2.8e-48 195.3 118 80.5
Sp2g07880 Schrenkiella parvula HOM05D004197 ORTHO05D004975 2.8e-48 195.3 120 79.2
unitig_899.g14470 Utricularia gibba HOM05D004197 ORTHO05D004975 2.8e-48 195.3 120 75.8
Cfa015042 Carpinus fangiana HOM05D004197 ORTHO05D004975 3.6e-48 194.9 120 76.7
EL10Ac3g06082 Beta vulgaris HOM05D004197 ORTHO05D004975 4.7e-48 194.5 120 76.7
Aqoxy7G00569 Aquilegia oxysepala HOM05D004197 ORTHO05D004975 6.2e-48 194.1 120 77.5
TWI34G1638 Tripterygium wilfordii HOM05D004197 ORTHO05D004975 6.2e-48 194.1 144 70.1
Lalb_Chr10g0101191 Lupinus albus HOM05D004197 ORTHO05D004975 8.0e-48 193.7 120 76.7
HPP92_007604 Vanilla planifolia HOM05D004197 ORTHO05D004975 1.4e-47 193.0 120 75.0
Zm00001eb400580 Zea mays HOM05D004197 ORTHO05D004975 1.4e-47 193.0 120 77.5
ClCG07G015230 Citrullus lanatus HOM05D004197 ORTHO05D004975 1.8e-47 192.6 120 75.0
TPR.G16667 Trifolium pratense HOM05D004197 ORTHO05D004975 1.8e-47 192.6 118 78.0
Lj1g0017974 Lotus japonicus HOM05D004197 ORTHO05D004975 3.1e-47 191.8 115 77.4
Phvul.010G124900 Phaseolus vulgaris HOM05D004197 ORTHO05D004975 4.0e-47 191.4 111 82.0
CsaV3_4G002820 Cucumis sativus L. HOM05D004197 ORTHO05D004975 8.9e-47 190.3 120 74.2
Psat1g223520 Pisum sativum HOM05D004197 ORTHO05D004975 8.9e-47 190.3 118 75.4
TAR362G0244 Trochodendron aralioides HOM05D000090 ORTHO05D001584 1.2e-46 189.9 111 81.1
Medtr8g022770 Medicago truncatula HOM05D004197 ORTHO05D004975 1.5e-46 189.5 118 76.3
Sed0002539 Sechium edule HOM05D004197 ORTHO05D004975 3.4e-46 188.3 120 74.2
Psat4g166320 Pisum sativum HOM05D004197 ORTHO05D004975 9.8e-46 186.8 120 71.7
TAR629G0957 Trochodendron aralioides HOM05D004197 ORTHO05D004975 1.3e-45 186.4 119 76.5
QL04p073242 Quercus lobata HOM05D004197 ORTHO05D004975 1.7e-45 186.0 118 76.3
SGA_v2.0_scaffold49G18240 Striga asiatica HOM05D004197 ORTHO05D004975 1.1e-44 183.3 110 80.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 1.4e-44 183.0 110 80.0
Actinidia11444 Actinidia chinensis HOM05D005056 ORTHO05D006487 1.9e-44 182.6 110 77.3
HanXRQChr09g0264591 Helianthus annuus HOM05D004197 ORTHO05D004975 2.4e-44 182.2 94 94.7
FAN24G1973 Fragaria x ananassa HOM05D004197 ORTHO05D004975 3.9e-42 174.9 110 78.2
FvH4_2g13530 Fragaria vesca HOM05D004197 ORTHO05D004975 6.6e-42 174.1 112 77.7
QL04p093649 Quercus lobata HOM05D004197 ORTHO05D004975 2.8e-40 168.7 111 74.8
TAR493G0004 Trochodendron aralioides HOM05D004197 ORTHO05D004975 2.8e-40 168.7 107 77.6
Gorai.004G083000 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.0e-39 164.9 95 84.2
Mapoly0027s0066 Marchantia polymorpha HOM05D004197 ORTHO05D004975 5.2e-39 164.5 120 67.5
AUR62002389 Chenopodium quinoa HOM05D004197 ORTHO05D004975 4.4e-38 161.4 213 45.1
C04p24770 Brassica napus HOM05D004197 ORTHO05D004975 5.8e-38 161.0 110 76.4
BolC4t23981H Brassica oleracea HOM05D004197 ORTHO05D004975 5.8e-38 161.0 110 76.4
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 2.2e-37 159.1 95 81.1
BcaC02g10824 Brassica carinata HOM05D004197 ORTHO05D004975 4.9e-37 157.9 110 75.5
Gohir.D10G075200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 4.9e-37 157.9 91 84.6
Gohir.D08G078000 Gossypium hirsutum HOM05D004197 ORTHO05D004975 8.3e-37 157.1 93 82.8
Gohir.D02G135200 Gossypium hirsutum HOM05D004197 ORTHO05D004975 1.1e-36 156.8 91 84.6
arahy.Tifrunner.gnm1.ann1.XY21PC Arachis hypogaea HOM05D004197 ORTHO05D004975 1.4e-36 156.4 131 61.8
SEGI_18755 Sequoiadendron giganteum HOM05D004197 ORTHO05D004975 1.4e-36 156.4 121 61.2
Atru.chr12.1273 Acer truncatum HOM05D004197 ORTHO05D004975 7.1e-36 154.1 93 77.4
Gorai.011G081000 Gossypium raimondii HOM05D004197 ORTHO05D004975 1.6e-35 152.9 91 83.5
Peaxi162Scf00474g00723 Petunia axillaris HOM05D004197 ORTHO05D004975 2.1e-35 152.5 120 63.3
Atru.chr12.1301 Acer truncatum HOM05D004197 ORTHO05D004975 3.5e-35 151.8 91 78.0
Gorai.005G151300 Gossypium raimondii HOM05D004197 ORTHO05D004975 3.5e-35 151.8 91 81.3
Pp3c1_20100 Physcomitrium patens HOM05D004197 ORTHO05D004975 1.3e-34 149.8 120 60.0
SalBow2G3321 Salvia bowleyana HOM05D004197 ORTHO05D004975 1.7e-34 149.4 90 81.1
SHI24203 Sapria himalayana HOM05D004197 ORTHO05D004975 1.7e-34 149.4 133 57.1
Lj3g0000340 Lotus japonicus HOM05D004197 ORTHO05D004975 2.3e-34 149.1 122 61.5
Rhsim02G0084000 Rhododendron simsii HOM05D004197 ORTHO05D004975 3.9e-34 148.3 85 82.4
Sabra13G0105500 Salix brachista HOM05D004197 ORTHO05D004975 3.3e-33 145.2 169 49.1
DCAR_029674 Daucus carota HOM05D004197 ORTHO05D004975 5.6e-33 144.4 91 75.8
DCAR_009572 Daucus carota HOM05D004197 ORTHO05D004975 2.8e-32 142.1 91 74.7
Zm00001eb007240 Zea mays HOM05D004197 ORTHO05D004975 2.8e-32 142.1 91 75.8
Lsat_1_v5_gn_6_23540 Lactuca sativa HOM05D004197 ORTHO05D004975 3.6e-32 141.7 95 74.7
unitig_736.g22525 Utricularia gibba HOM05D000398 ORTHO05D000551 3.1e-31 138.7 86 74.4
arahy.Tifrunner.gnm1.ann1.60591L Arachis hypogaea HOM05D004197 ORTHO05D004975 4.4e-30 134.8 136 57.4
Gohir.D08G220700 Gossypium hirsutum HOM05D004197 ORTHO05D004975 7.6e-30 134.0 77 85.7
CARHR099320 Cardamine hirsuta HOM05D004197 ORTHO05D004975 9.9e-30 133.7 83 77.1
TPR.G31074 Trifolium pratense HOM05D004197 ORTHO05D006502 2.3e-26 122.5 93 64.5
SMO347G0376 Selaginella moellendorffii HOM05D004197 ORTHO05D004975 3.9e-26 121.7 119 47.1
COL.COLO4_08144 Corchorus olitorius HOM05D004197 ORTHO05D004975 1.6e-24 116.3 62 85.5
Hma1.2p1_0150F.1_g066800 Hydrangea macrophylla HOM05D004197 ORTHO05D004975 2.1e-24 115.9 62 83.9
arahy.Tifrunner.gnm1.ann1.GGUP18 Arachis hypogaea HOM05D004197 ORTHO05D004975 2.8e-24 115.5 62 85.5
vmacro16589 Vaccinium macrocarpon HOM05D004197 ORTHO05D004975 4.8e-24 114.8 62 83.9
Lsat_1_v5_gn_2_131080 Lactuca sativa HOM05D004197 ORTHO05D004975 3.1e-23 112.1 82 72.0
Gorai.004G076200 Gossypium raimondii HOM05D004197 ORTHO05D004975 6.9e-23 110.9 122 50.8
Glyma.07G044001 Glycine max HOM05D004197 ORTHO05D004975 2.9e-21 105.5 89 64.0
arahy.Tifrunner.gnm1.ann1.HJ8Q1I Arachis hypogaea HOM05D004197 ORTHO05D004975 5.1e-18 94.7 57 75.4
Cre06.g270650 Chlamydomonas reinhardtii HOM05D004197 ORTHO05D004975 8.7e-18 94.0 110 40.9
Gohir.D04G172540 Gossypium hirsutum HOM05D004197 ORTHO05D004975 9.6e-17 90.5 62 72.6
Gorai.012G161800 Gossypium raimondii HOM05D004197 ORTHO05D004975 4.8e-16 88.2 62 71.0
MCO09G643 Micromonas commoda HOM05D004197 ORTHO05D004975 5.3e-15 84.7 119 37.8
Gorai.004G234500 Gossypium raimondii HOM05D004197 ORTHO05D004975 7.6e-14 80.9 57 71.9
Actinidia27110 Actinidia chinensis HOM05D004197 ORTHO05D004975 1.5e-09 66.6 44 72.7
Thecc.10G088100 Theobroma cacao HOM05D004197 ORTHO05D004975 1.1e-07 60.5 35 77.1


User provided reference genes

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