Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 2.7e-96 355.5 205 100.0
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 1.0e-63 247.3 210 75.2
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 1.2e-48 197.2 176 71.6
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 4.6e-48 195.3 214 52.3
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 2.2e-45 186.4 207 50.7
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 5.9e-43 178.3 211 48.3
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 5.5e-41 171.8 171 60.2
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 1.6e-40 170.2 171 59.6
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 2.1e-40 169.9 171 59.1
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 7.9e-40 167.9 169 59.2
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.8e-39 166.8 206 51.5
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 3.0e-39 166.0 210 46.7
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 6.7e-39 164.9 172 57.6
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 8.8e-39 164.5 209 47.4
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 1.1e-38 164.1 220 48.6
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.0e-38 163.3 211 52.6
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.0e-38 163.3 210 48.1
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 3.3e-38 162.5 216 48.6
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 5.7e-38 161.8 210 50.0
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 5.7e-38 161.8 210 50.0
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 5.7e-38 161.8 210 50.0
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 7.4e-38 161.4 212 47.2
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 7.4e-38 161.4 204 47.1
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 9.7e-38 161.0 208 49.5
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 1.3e-37 160.6 173 57.2
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 2.2e-37 159.8 178 52.8
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.2e-37 159.8 210 51.9
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 2.2e-37 159.8 207 48.8
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 3.7e-37 159.1 210 50.0
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 6.3e-37 158.3 217 47.5
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.2e-35 154.1 267 38.6
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 2.0e-35 153.3 182 54.4
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 2.0e-35 153.3 182 48.4
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 2.0e-35 153.3 212 46.7
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 5.9e-35 151.8 182 49.5
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 7.7e-35 151.4 182 53.3
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 1.0e-34 151.0 184 51.6
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 2.2e-34 149.8 216 44.4
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.2e-34 149.8 212 44.8
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 3.8e-34 149.1 173 53.8
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 6.5e-34 148.3 172 55.2
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 6.5e-34 148.3 169 53.3
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 8.5e-34 147.9 213 45.5
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 1.5e-33 147.1 184 51.6
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 1.2e-32 144.1 181 47.5
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 2.1e-32 143.3 181 52.5
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 3.6e-32 142.5 178 49.4
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 4.7e-32 142.1 179 48.0
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 6.1e-32 141.7 170 54.1
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 8.0e-32 141.4 147 60.5
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 1.0e-31 141.0 207 44.4
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 1.4e-31 140.6 170 55.9
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 3.0e-31 139.4 173 51.4
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 1.2e-30 137.5 203 41.4
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 2.6e-30 136.3 201 44.8
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 7.5e-30 134.8 153 56.2
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 9.7e-30 134.4 184 47.3
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 1.3e-29 134.0 163 52.1
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 2.2e-29 133.3 211 45.0
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 2.8e-29 132.9 208 45.7
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 4.8e-29 132.1 168 48.8
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 6.3e-29 131.7 165 55.8
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 8.2e-29 131.3 183 45.9
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 1.1e-28 131.0 168 49.4
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 2.4e-28 129.8 162 50.6
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 7.0e-28 128.3 172 46.5
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 9.1e-28 127.9 192 45.3
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 9.1e-28 127.9 168 50.6
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 1.6e-27 127.1 195 49.7
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 1.6e-27 127.1 168 45.2
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 2.7e-27 126.3 164 55.5
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 2.7e-27 126.3 191 41.4
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 3.5e-27 125.9 145 48.3
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 5.9e-27 125.2 144 52.8
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 1.0e-26 124.4 205 46.3
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 1.0e-26 124.4 205 46.3
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.0e-26 124.4 165 50.3
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 1.0e-26 124.4 173 41.0
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.7e-26 123.6 151 52.3
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 2.2e-26 123.2 184 48.9
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 2.2e-26 123.2 184 48.9
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 2.9e-26 122.9 189 50.3
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 2.9e-26 122.9 186 51.1
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 6.5e-26 121.7 146 54.8
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.5e-25 120.6 146 51.4
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 7.2e-25 118.2 165 49.7
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 7.2e-25 118.2 165 49.7
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 1.6e-24 117.1 157 51.6
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 1.6e-24 117.1 165 44.8
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 4.7e-24 115.5 161 47.8
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 7.5e-22 108.2 159 42.8
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 4.8e-21 105.5 155 49.0
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 2.4e-20 103.2 143 51.0
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 1.2e-16 90.9 100 58.0
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.8e-16 89.7 123 48.0
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 9.8e-14 81.3 128 43.8
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 1.3e-13 80.9 95 46.3
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 1.7e-13 80.5 100 43.0
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 2.2e-13 80.1 171 36.3
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 6.3e-13 78.6 170 31.8
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 6.3e-13 78.6 184 38.6
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 5.0e-10 68.9 178 37.6
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 1.9e-09 67.0 130 43.8
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 4.3e-09 65.9 206 25.7
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 1.6e-08 63.9 183 36.1
HanXRQChr17g0543701 Helianthus annuus HOM05D007192 ORTHO05D009034 6.8e-07 58.5 51 62.7


User provided reference genes

Program Settings