Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 5.8e-104 380.9 199 100.0
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 5.7e-59 231.5 205 63.9
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 5.7e-51 204.9 215 56.3
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 5.2e-44 181.8 123 75.6
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.2e-43 180.6 123 72.4
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 5.7e-43 178.3 119 70.6
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 2.2e-42 176.4 123 71.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.8e-42 176.0 124 72.6
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.8e-42 176.0 115 73.9
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 6.3e-42 174.9 180 54.4
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.1e-41 172.6 115 72.2
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 5.3e-41 171.8 114 71.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.6e-40 170.2 199 50.3
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 2.0e-40 169.9 207 49.8
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.7e-40 169.5 211 48.3
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 5.9e-40 168.3 210 48.6
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 7.7e-40 167.9 114 71.9
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 7.7e-40 167.9 110 72.7
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.3e-39 167.2 115 68.7
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 2.2e-39 166.4 114 71.1
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.1e-38 164.1 111 66.7
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.5e-38 161.8 201 49.8
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.5e-38 161.8 201 49.8
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 7.2e-38 161.4 98 81.6
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.2e-37 160.6 109 68.8
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.2e-37 160.6 212 46.7
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.2e-37 160.6 204 49.0
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 2.1e-37 159.8 126 61.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 3.6e-37 159.1 109 67.9
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 4.7e-37 158.7 110 64.5
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 6.1e-37 158.3 108 66.7
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 6.1e-37 158.3 208 43.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 6.1e-37 158.3 202 48.5
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 6.1e-37 158.3 201 48.8
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 8.0e-37 157.9 113 68.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 8.0e-37 157.9 113 68.1
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.4e-36 157.1 95 75.8
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.4e-36 157.1 201 48.3
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.0e-36 156.0 200 44.5
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 5.2e-36 155.2 112 66.1
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 6.8e-36 154.8 218 48.6
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 1.2e-35 154.1 125 60.8
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.2e-35 154.1 204 44.1
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.2e-35 154.1 206 46.6
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.5e-35 153.7 112 64.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.0e-35 153.3 109 65.1
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 2.6e-35 152.9 112 62.5
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 4.4e-35 152.1 215 43.7
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 5.7e-35 151.8 108 65.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 5.7e-35 151.8 116 60.3
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 5.7e-35 151.8 111 61.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 7.5e-35 151.4 100 68.0
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.5e-35 151.4 114 63.2
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 7.5e-35 151.4 114 63.2
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 7.5e-35 151.4 114 63.2
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 9.8e-35 151.0 122 59.8
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 9.8e-35 151.0 114 60.5
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.3e-34 150.6 117 65.0
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.3e-34 150.6 117 65.0
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 1.7e-34 150.2 117 64.1
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.7e-34 150.2 111 63.1
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.7e-34 150.2 110 63.6
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 1.7e-34 150.2 114 64.9
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 2.8e-34 149.4 212 43.9
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.3e-34 148.3 115 60.0
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.3e-34 148.3 115 60.0
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.1e-33 147.5 109 65.1
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-33 147.5 123 56.9
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 1.1e-33 147.5 109 61.5
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.4e-33 147.1 117 63.2
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 1.8e-33 146.7 102 67.6
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 2.4e-33 146.4 108 62.0
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.4e-33 145.2 196 43.9
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 9.1e-33 144.4 121 57.0
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.6e-32 143.7 109 60.6
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.6e-32 143.7 109 61.5
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 7.7e-32 141.4 112 58.0
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-31 141.0 96 74.0
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.0e-31 141.0 201 46.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.7e-31 140.2 198 42.4
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 2.9e-31 139.4 95 70.5
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 2.9e-31 139.4 122 50.8
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.9e-31 139.4 111 55.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 8.5e-31 137.9 106 61.3
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.5e-30 137.1 213 40.4
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.5e-30 136.3 97 67.0
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.8e-29 132.9 109 56.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 6.1e-29 131.7 72 87.5
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 2.2e-26 123.2 182 45.1
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.7e-26 122.5 110 55.5
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 1.8e-25 120.2 99 58.6
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 1.8e-25 120.2 119 47.9
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 1.8e-25 120.2 100 56.0
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 4.1e-25 119.0 100 54.0
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 5.4e-25 118.6 83 68.7
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 1.3e-23 114.0 91 59.3
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 2.8e-21 106.3 88 58.0
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.8e-21 106.3 85 54.1
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 4.7e-21 105.5 79 59.5
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.5e-19 100.5 73 60.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 1.5e-19 100.5 106 48.1
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 1.8e-17 93.6 62 69.4
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 5.4e-17 92.0 87 51.7
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 1.1e-12 77.8 153 40.5
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 2.3e-07 60.1 97 40.2
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.1e-06 57.8 44 59.1
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.5e-06 57.4 30 76.7


User provided reference genes

Program Settings