Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0284811 Helianthus annuus HOM05D000621 ORTHO05D000421 5.6e-43 177.2 87 100.0
HanXRQChr17g0537271 Helianthus annuus HOM05D000621 ORTHO05D000421 2.1e-26 122.1 78 80.8
HanXRQChr10g0284821 Helianthus annuus HOM05D000621 ORTHO05D000421 9.5e-19 96.7 78 65.4
HanXRQChr15g0465111 Helianthus annuus HOM05D000621 ORTHO05D000421 4.7e-18 94.4 89 55.1
ECA247G0073 Erigeron canadensis HOM05D000621 ORTHO05D000421 4.4e-16 87.8 90 51.1
Lsat_1_v5_gn_8_76680 Lactuca sativa HOM05D000621 ORTHO05D000421 3.8e-15 84.7 81 51.9
HanXRQChr04g0106261 Helianthus annuus HOM05D000621 ORTHO05D000421 3.5e-13 78.2 74 51.4
Lsat_1_v5_gn_8_167620 Lactuca sativa HOM05D000621 ORTHO05D000421 8.7e-12 73.6 74 50.0
CSS0010554 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 4.3e-11 71.2 73 47.9
Peaxi162Scf00770g00127 Petunia axillaris HOM05D000621 ORTHO05D000421 3.6e-10 68.2 74 43.2
Dinv33142 Davidia involucrata HOM05D000621 ORTHO05D000421 8.1e-10 67.0 86 44.2
HanXRQChr06g0168081 Helianthus annuus HOM05D000621 ORTHO05D000421 1.4e-09 66.2 74 41.9
Cc01_g21650 Coffea canephora HOM05D000621 ORTHO05D000421 9.0e-09 63.5 70 42.9
EL10As5g23608 Beta vulgaris HOM05D000621 ORTHO05D000421 1.2e-08 63.2 70 42.9
DCAR_002907 Daucus carota HOM05D000621 ORTHO05D000421 2.0e-08 62.4 86 45.3
Duzib211G0322 Durio zibethinus HOM05D000621 ORTHO05D000421 3.4e-08 61.6 73 39.7
MSTRG.18079 Avicennia marina HOM05D000621 ORTHO05D000421 4.4e-08 61.2 82 41.5
DCAR_005738 Daucus carota HOM05D000621 ORTHO05D000421 7.6e-08 60.5 92 42.4
AUR62024602 Chenopodium quinoa HOM05D000621 ORTHO05D000421 9.9e-08 60.1 70 42.9
SalBow3G2875 Salvia bowleyana HOM05D000621 ORTHO05D000421 9.9e-08 60.1 81 37.0
AUR62011757 Chenopodium quinoa HOM05D000621 ORTHO05D000421 2.2e-07 58.9 70 41.4
Thecc.01G318600 Theobroma cacao HOM05D000621 ORTHO05D000421 2.2e-07 58.9 73 35.6
CSS0001187 Camellia sinensis var. sinensis HOM05D000621 ORTHO05D000421 2.9e-07 58.5 74 39.2
Hma1.2p1_0965F.1_g242100 Hydrangea macrophylla HOM05D000621 ORTHO05D000421 1.1e-06 56.6 86 39.5
Nitab4.5_0007983g0010 Nicotiana tabacum HOM05D000621 ORTHO05D000421 1.4e-06 56.2 74 40.5
Lsat_1_v5_gn_4_27300 Lactuca sativa HOM05D000621 ORTHO05D000421 2.4e-06 55.5 81 40.7
GSVIVG01028157001 Vitis vinifera HOM05D000621 ORTHO05D000421 2.4e-06 55.5 73 38.4
Ah.11g049120 Amaranthus hybridus HOM05D000621 ORTHO05D000421 3.2e-06 55.1 69 42.0
Prupe.6G310200 Prunus persica HOM05D000621 ORTHO05D000421 3.2e-06 55.1 73 38.4
PGSC0003DMG400009053 Solanum tuberosum HOM05D000621 ORTHO05D000421 5.4e-06 54.3 73 37.0
CAN.G293.6 Capsicum annuum HOM05D000621 ORTHO05D000421 7.1e-06 53.9 73 37.0
Gohir.D08G141200 Gossypium hirsutum HOM05D000621 ORTHO05D000421 7.1e-06 53.9 73 35.6
Gorai.004G145200 Gossypium raimondii HOM05D000621 ORTHO05D000421 7.1e-06 53.9 73 35.6
Manes.01G230800 Manihot esculenta HOM05D000621 ORTHO05D000421 7.1e-06 53.9 72 36.1
Nitab4.5_0000222g0110 Nicotiana tabacum HOM05D000621 ORTHO05D000421 7.1e-06 53.9 74 37.8
Sopen01g031010 Solanum pennellii HOM05D000621 ORTHO05D000421 7.1e-06 53.9 73 37.0
Dinv05993 Davidia involucrata HOM05D000621 ORTHO05D000421 9.3e-06 53.5 94 36.2
Gohir.A08G120300 Gossypium hirsutum HOM05D000621 ORTHO05D000421 9.3e-06 53.5 73 35.6


User provided reference genes

Program Settings