Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 5.4e-262 907.1 458 100.0
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 2.0e-160 569.7 468 67.3
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 1.0e-143 514.2 472 60.4
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 7.0e-137 491.5 473 58.1
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 7.0e-137 491.5 473 57.7
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-133 480.3 472 56.8
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.6e-133 480.3 473 58.8
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 1.4e-132 477.2 474 56.5
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.8e-132 476.9 436 60.8
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 4.0e-132 475.7 474 56.1
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 6.8e-132 474.9 476 56.9
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 2.6e-131 473.0 473 55.8
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 9.8e-131 471.1 475 56.0
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.3e-130 470.7 474 56.8
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 4.9e-130 468.8 471 56.9
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 6.4e-130 468.4 474 55.7
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 8.3e-130 468.0 471 55.0
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 4.1e-129 465.7 480 56.5
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 4.1e-129 465.7 475 56.4
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 2.0e-128 463.4 473 54.8
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 2.7e-128 463.0 472 54.4
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 7.8e-128 461.5 493 53.8
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 5.0e-127 458.8 473 55.2
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 6.6e-127 458.4 501 52.1
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 1.1e-126 457.6 472 54.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 2.1e-125 453.4 493 52.5
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 2.8e-125 453.0 472 54.2
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 2.8e-125 453.0 473 54.1
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 3.6e-125 452.6 471 56.7
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 4.7e-125 452.2 527 51.6
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.1e-124 451.1 472 53.6
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-124 450.7 475 57.5
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.3e-124 449.9 475 54.3
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.3e-124 449.9 475 54.5
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 5.2e-124 448.7 483 53.4
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 5.2e-124 448.7 474 54.9
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 8.9e-124 448.0 475 53.1
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.2e-123 447.6 475 54.3
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 2.0e-123 446.8 496 51.6
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 4.4e-123 445.7 475 53.7
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 4.4e-123 445.7 474 55.1
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 1.3e-122 444.1 474 53.6
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 2.2e-122 443.4 476 56.3
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 2.9e-122 443.0 474 54.9
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.9e-122 442.2 475 53.7
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.9e-121 440.3 475 54.5
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 4.1e-121 439.1 474 53.0
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 4.1e-121 439.1 484 53.7
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 2.0e-120 436.8 472 53.2
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 2.0e-120 436.8 475 52.4
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 2.7e-120 436.4 473 52.0
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.7e-119 433.7 473 54.1
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.3e-119 433.3 535 49.7
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 3.9e-119 432.6 441 56.9
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 8.6e-119 431.4 482 52.3
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 1.1e-118 431.0 483 53.2
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 2.1e-117 426.8 472 51.1
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 2.8e-117 426.4 474 52.7
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 6.2e-117 425.2 471 54.4
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 1.8e-116 423.7 516 50.2
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 5.2e-116 422.2 483 51.8
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 5.2e-116 422.2 474 53.8
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 5.2e-116 422.2 471 50.3
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.8e-116 421.8 482 51.5
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 4.4e-115 419.1 482 51.2
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 7.5e-115 418.3 481 50.7
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 1.3e-114 417.5 493 50.9
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 1.3e-114 417.5 481 51.8
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 5.4e-113 412.1 463 52.1
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 2.3e-111 406.8 510 48.4
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 5.1e-111 405.6 490 51.4
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 2.5e-110 403.3 484 51.0
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 3.3e-110 402.9 490 50.4
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 1.6e-109 400.6 548 46.7
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 2.8e-109 399.8 474 50.6
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 8.1e-109 398.3 512 47.7
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 2.4e-108 396.7 496 49.2
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 3.1e-108 396.4 507 47.9
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 5.2e-108 395.6 490 50.4
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 6.8e-108 395.2 491 50.3
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 1.5e-107 394.0 548 46.2
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.5e-107 394.0 472 50.6
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 3.4e-107 392.9 517 48.5
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 3.5e-104 382.9 510 48.0
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 7.8e-104 381.7 445 51.7
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 1.3e-103 380.9 502 48.2
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.3e-103 380.9 472 48.7
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 2.3e-103 380.2 493 48.3
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 2.5e-102 376.7 485 49.3
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 5.6e-102 375.6 481 47.4
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 4.0e-100 369.4 492 48.6
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 9.0e-100 368.2 481 47.2
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 1.1e-97 361.3 506 45.3
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 2.1e-96 357.1 357 58.5
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 3.5e-96 356.3 556 43.7
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 3.0e-95 353.2 538 43.9
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 3.0e-95 353.2 359 57.1
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.1e-94 351.3 562 41.8
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 2.8e-93 346.7 427 49.4
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 4.0e-92 342.8 374 54.5
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 6.4e-90 335.5 425 48.0
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 3.2e-89 333.2 514 44.4
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 4.6e-88 329.3 510 44.5
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 3.7e-85 319.7 322 57.1
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 2.4e-84 317.0 494 44.5
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 9.0e-76 288.5 257 61.9
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 3.1e-60 236.9 218 60.1
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 4.1e-60 236.5 323 44.6
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.2e-59 235.0 218 59.6
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 4.2e-57 226.5 213 59.6
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 5.5e-57 226.1 174 68.4
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 1.2e-56 224.9 265 50.9
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 6.1e-56 222.6 267 51.7
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 8.5e-50 202.2 416 35.1
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 9.7e-46 188.7 358 36.6
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 1.6e-43 181.4 421 35.4
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 4.5e-43 179.9 476 31.1
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 4.2e-41 173.3 529 30.1
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 2.0e-38 164.5 216 45.8
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 4.7e-32 143.3 460 29.3
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 9.8e-30 135.6 470 26.6
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 3.7e-29 133.7 488 27.7
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 4.1e-28 130.2 360 33.9
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.0e-26 125.6 496 27.4
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 2.9e-26 124.0 151 46.4
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 9.5e-25 119.0 127 53.5
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.8e-23 114.8 451 26.4
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 7.5e-22 109.4 139 45.3
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 2.3e-18 97.8 81 65.4
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 8.6e-18 95.9 165 37.6
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 2.2e-13 81.3 115 40.0
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 2.5e-09 67.8 41 73.2
Ciclev10028962m.g Citrus clementina HOM05D005413 ORTHO05D006536 1.5e-06 58.5 108 38.0
Actinidia37056 Actinidia chinensis HOM05D005413 ORTHO05D006536 2.0e-06 58.2 158 32.9
CSS0023574 Camellia sinensis var. sinensis HOM05D005413 ORTHO05D006536 3.4e-06 57.4 104 37.5
Nn2g14375 Nelumbo nucifera HOM05D005413 ORTHO05D006536 3.4e-06 57.4 105 38.1
QL01p019216 Quercus lobata HOM05D005413 ORTHO05D006536 4.4e-06 57.0 104 36.5
Hma1.2p1_0101F.1_g049660 Hydrangea macrophylla HOM05D005413 ORTHO05D006536 5.8e-06 56.6 141 30.5
Dinv18856 Davidia involucrata HOM05D005413 ORTHO05D006536 9.8e-06 55.8 161 30.4


User provided reference genes

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