Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-67 259.2 135 100.0
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 5.7e-63 244.2 135 94.8
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 2.0e-60 235.7 135 89.6
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 2.0e-60 235.7 135 89.6
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 2.0e-60 235.7 135 89.6
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 8.6e-59 230.3 135 88.1
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 8.6e-59 230.3 135 86.7
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 8.6e-59 230.3 135 87.4
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 86.7
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 4.0e-56 221.5 135 83.7
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.0
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 83.0
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 82.2
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 82.2
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 82.2
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 82.2
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 82.2
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 2.0e-55 219.2 135 82.2
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 2.0e-55 219.2 135 82.2
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 2.0e-55 219.2 135 83.7
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 2.6e-55 218.8 135 85.2
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.4e-55 218.4 135 82.2
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 3.4e-55 218.4 135 84.4
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 7.5e-55 217.2 135 81.5
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 7.5e-55 217.2 135 81.5
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 9.8e-55 216.9 130 86.9
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 2.9e-54 215.3 125 89.6
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 3.7e-54 214.9 118 94.9
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 4.9e-54 214.5 135 80.7
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 4.9e-54 214.5 134 81.3
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 4.9e-54 214.5 123 94.3
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 6.4e-54 214.2 135 80.7
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 1.9e-53 212.6 135 82.2
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 7.0e-53 210.7 135 79.3
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 2.0e-52 209.1 135 80.0
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.7e-51 206.1 135 79.3
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 2.3e-51 205.7 131 85.5
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 3.3e-50 201.8 129 83.7
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.1e-48 196.8 127 83.5
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 2.3e-48 195.7 134 76.1
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 2.6e-47 192.2 130 76.2
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 2.6e-47 192.2 130 76.2
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 9.8e-47 190.3 118 79.7
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.2e-46 189.1 114 80.7
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 2.2e-46 189.1 135 73.3
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.9e-46 188.0 117 82.1
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 2.7e-44 182.2 117 80.3
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 1.0e-43 180.3 135 71.1
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 3.9e-43 178.3 118 77.1
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 1.1e-42 176.8 104 82.7
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.2e-41 173.3 115 81.7
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.4e-40 169.9 117 75.2
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.1e-40 168.7 117 74.4
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 1.4e-37 159.8 135 60.0
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.1e-37 158.3 91 86.8
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 1.7e-35 152.9 93 82.8
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 4.7e-33 144.8 113 66.4
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.4e-32 142.5 82 87.8
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 4.4e-31 138.3 94 77.7
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 9.9e-31 137.1 85 84.7
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 4.9e-30 134.8 93 78.5
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 4.6e-28 128.3 87 77.0
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 5.1e-27 124.8 135 54.1
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-26 123.6 135 54.8
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 1.9e-26 122.9 82 78.0
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 3.3e-26 122.1 99 64.6
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 1.4e-24 116.7 93 64.5
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 9.0e-24 114.0 79 77.2
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 58 100.0
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 58 100.0
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 1.7e-22 109.8 58 100.0
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 2.2e-22 109.4 134 45.5
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 8.4e-22 107.5 90 67.8
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 1.1e-21 107.1 77 74.0
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 2.4e-21 105.9 63 87.3
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 3.2e-21 105.5 70 77.1
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 3.0e-19 99.0 70 75.7
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 5.1e-19 98.2 70 74.3
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 4.8e-17 91.7 60 78.3
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 2.4e-16 89.4 58 79.3
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 2.4e-16 89.4 58 79.3
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 9.0e-16 87.4 55 81.8
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.6e-15 85.9 58 74.1
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 1.7e-14 83.2 53 81.1
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 2.2e-14 82.8 58 74.1
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 2.2e-14 82.8 58 72.4
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 3.8e-14 82.0 52 78.8
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 9.3e-13 77.4 56 71.4
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 2.1e-12 76.3 78 55.1
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 2.7e-12 75.9 50 78.0
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 1.0e-11 73.9 63 69.8
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 1.3e-11 73.6 50 76.0
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.5e-10 70.1 56 60.7
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.5e-10 70.1 56 60.7
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.5e-10 70.1 56 60.7
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.5e-10 70.1 56 60.7
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.5e-10 70.1 56 60.7
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 1.5e-10 70.1 56 60.7
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.5e-10 70.1 56 60.7
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.9e-10 69.7 60 66.7
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 1.9e-10 69.7 56 60.7
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.1e-08 63.9 72 54.2
BraSC143t45637Z Brassica rapa HOM05D002824 ORTHO05D007162 1.3e-06 57.0 39 74.4


User provided reference genes

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