Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr10g0279511 Helianthus annuus HOM05D005604 ORTHO05D006745 3.6e-280 967.6 495 100.0
ECA247G0587 Erigeron canadensis HOM05D005604 ORTHO05D006745 2.7e-182 642.5 478 72.4
Lsat_1_v5_gn_9_15140 Lactuca sativa HOM05D005604 ORTHO05D006745 6.8e-178 627.9 533 67.5
Dinv12653 Davidia involucrata HOM05D005604 ORTHO05D006745 1.2e-166 590.5 559 61.5
Hma1.2p1_0226F.1_g095420 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 7.3e-164 581.3 537 60.7
HanXRQChr04g0108051 Helianthus annuus HOM05D005604 ORTHO05D006745 2.8e-163 579.3 537 61.5
CSS0000075 Camellia sinensis var. sinensis HOM05D005604 ORTHO05D006745 2.3e-162 576.2 561 58.6
Cpa.g.sc43.114 Carica papaya HOM05D005604 ORTHO05D006745 6.8e-162 574.7 539 60.1
QL09p051278 Quercus lobata HOM05D005604 ORTHO05D006745 5.8e-161 571.6 552 60.1
Dinv19175 Davidia involucrata HOM05D005604 ORTHO05D006745 7.5e-161 571.2 558 59.5
Sopen06g034740 Solanum pennellii HOM05D005604 ORTHO05D006745 1.3e-160 570.5 537 60.5
PGSC0003DMG400020164 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.1e-159 567.4 536 60.4
Solyc06g083370.3 Solanum lycopersicum HOM05D005604 ORTHO05D006745 9.2e-159 564.3 537 60.0
Nitab4.5_0009005g0020 Nicotiana tabacum HOM05D005604 ORTHO05D006745 7.8e-158 561.2 533 60.4
MSTRG.18511 Avicennia marina HOM05D005604 ORTHO05D006745 2.3e-157 559.7 546 59.3
CiPaw.01G050300 Carya illinoinensis HOM05D005604 ORTHO05D006745 6.6e-157 558.1 559 59.4
FAN27G1924 Fragaria x ananassa HOM05D005604 ORTHO05D006745 8.6e-157 557.8 562 58.5
COL.COLO4_15621 Corchorus olitorius HOM05D005604 ORTHO05D006745 1.9e-156 556.6 564 58.3
Duzib133G0023 Durio zibethinus HOM05D005604 ORTHO05D006745 4.3e-156 555.4 558 57.5
ECA236G4946 Erigeron canadensis HOM05D005604 ORTHO05D006745 4.3e-156 555.4 496 62.9
CAN.G874.4 Capsicum annuum HOM05D005604 ORTHO05D006745 7.3e-156 554.7 542 58.7
FAN24G1841 Fragaria x ananassa HOM05D005604 ORTHO05D006745 7.3e-156 554.7 561 58.1
Potri.002G245700 Populus trichocarpa HOM05D005604 ORTHO05D006745 9.5e-156 554.3 558 55.9
Thecc.01G220400 Theobroma cacao HOM05D005604 ORTHO05D006745 8.1e-155 551.2 561 57.8
Atru.chr6.1423 Acer truncatum HOM05D005604 ORTHO05D006745 1.1e-154 550.8 566 57.1
FvH4_2g18560 Fragaria vesca HOM05D005604 ORTHO05D006745 1.1e-154 550.8 561 57.9
Prupe.8G199200 Prunus persica HOM05D005604 ORTHO05D006745 1.4e-154 550.4 560 57.7
Duzib138G1747 Durio zibethinus HOM05D005604 ORTHO05D006745 6.8e-154 548.1 561 56.9
FAN15G1583 Fragaria x ananassa HOM05D005604 ORTHO05D006745 6.8e-154 548.1 561 57.6
GSVIVG01003930001 Vitis vinifera HOM05D005604 ORTHO05D006745 8.9e-154 547.7 556 57.0
Gohir.D07G205700 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.5e-153 547.0 560 57.0
Gorai.001G231700 Gossypium raimondii HOM05D005604 ORTHO05D006745 1.5e-153 547.0 560 57.0
RcHm_v2.0_Chr6g0284121 Rosa chinensis HOM05D005604 ORTHO05D006745 2.6e-153 546.2 561 57.9
Actinidia39432 Actinidia chinensis HOM05D005604 ORTHO05D006745 9.9e-153 544.3 557 56.2
Migut.D00766 Erythranthe guttata HOM05D005604 ORTHO05D006745 1.3e-152 543.9 531 59.9
Nitab4.5_0003020g0080 Nicotiana tabacum HOM05D005604 ORTHO05D006745 1.7e-152 543.5 552 58.3
Ciclev10019544m.g Citrus clementina HOM05D005604 ORTHO05D006745 2.9e-152 542.7 565 57.0
Gohir.A07G199300 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.9e-151 540.0 559 57.2
CiPaw.02G023400 Carya illinoinensis HOM05D005604 ORTHO05D006745 5.4e-151 538.5 555 58.6
TWI36G0921 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 2.7e-150 536.2 563 55.8
Rhsim13G0047500 Rhododendron simsii HOM05D005604 ORTHO05D006745 3.5e-150 535.8 565 56.6
DCAR_004740 Daucus carota HOM05D005604 ORTHO05D006745 1.0e-149 534.3 539 57.3
Eucgr.K02139 Eucalyptus grandis HOM05D005604 ORTHO05D006745 1.0e-149 534.3 556 56.7
PGSC0003DMG400027951 Solanum tuberosum HOM05D005604 ORTHO05D006745 1.0e-149 534.3 553 56.6
vmacro02782 Vaccinium macrocarpon HOM05D005604 ORTHO05D006745 1.0e-149 534.3 611 52.9
CANSAT01G1141 Cannabis sativa HOM05D005604 ORTHO05D006745 3.0e-149 532.7 562 56.4
Solyc09g059470.4 Solanum lycopersicum HOM05D005604 ORTHO05D006745 1.5e-148 530.4 553 56.2
Sopen09g022640 Solanum pennellii HOM05D005604 ORTHO05D006745 1.5e-148 530.4 553 56.4
TAR362G0631 Trochodendron aralioides HOM05D005604 ORTHO05D006745 1.9e-148 530.0 563 57.2
MD10G1160100 Malus domestica HOM05D005604 ORTHO05D006745 3.3e-148 529.3 560 56.2
PSO063G0087 Papaver somniferum HOM05D005604 ORTHO05D006745 1.6e-147 526.9 558 56.5
CsaV3_7G026370 Cucumis sativus L. HOM05D005604 ORTHO05D006745 2.8e-147 526.2 560 56.6
ClCG09G008600 Citrullus lanatus HOM05D005604 ORTHO05D006745 3.6e-147 525.8 560 57.0
MD05G1171800 Malus domestica HOM05D005604 ORTHO05D006745 8.1e-147 524.6 560 55.2
Lj1A89T69 Lonicera japonica HOM05D005604 ORTHO05D006745 1.4e-146 523.9 592 55.2
Actinidia30055 Actinidia chinensis HOM05D005604 ORTHO05D006745 1.8e-146 523.5 526 58.2
PSO017G3308 Papaver somniferum HOM05D005604 ORTHO05D006745 1.5e-145 520.4 558 56.1
MELO3C021083.2 Cucumis melo HOM05D005604 ORTHO05D006745 5.8e-145 518.5 560 56.4
TAR633G2144 Trochodendron aralioides HOM05D005604 ORTHO05D006745 1.7e-144 516.9 563 55.6
Sed0019682 Sechium edule HOM05D005604 ORTHO05D006745 1.1e-143 514.2 561 54.9
MBI07_g18990_MAGBIO Magnolia biondii HOM05D005604 ORTHO05D006745 2.4e-143 513.1 558 54.5
Lsat_1_v5_gn_8_89380 Lactuca sativa HOM05D005604 ORTHO05D006745 1.6e-142 510.4 530 57.0
Thhalv10020454m.g Eutrema salsugineum HOM05D005604 ORTHO05D006745 2.1e-142 510.0 551 54.1
TWI18G0325 Tripterygium wilfordii HOM05D005604 ORTHO05D006745 3.5e-142 509.2 562 54.3
THA.LOC104822492 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 8.6e-141 504.6 552 54.5
Glyma.18G167400 Glycine max HOM05D005604 ORTHO05D006745 1.1e-140 504.2 559 54.9
Aa31LG5G17790 Aethionema arabicum HOM05D005604 ORTHO05D006745 1.9e-140 503.4 546 54.4
VMungo1383G0872 Vigna mungo HOM05D005604 ORTHO05D006745 2.5e-140 503.1 557 54.4
Haze_15255 Corylus avellana HOM05D005604 ORTHO05D006745 5.6e-140 501.9 637 50.1
Glyma.08G349100 Glycine max HOM05D005604 ORTHO05D006745 1.6e-139 500.4 564 54.8
DCAR_012669 Daucus carota HOM05D005604 ORTHO05D006745 2.1e-139 500.0 557 54.0
Cc01_g16720 Coffea canephora HOM05D005604 ORTHO05D006745 4.7e-139 498.8 541 54.2
Medtr7g056243 Medicago truncatula HOM05D005604 ORTHO05D006745 2.4e-138 496.5 537 55.1
Sp3g06160 Schrenkiella parvula HOM05D005604 ORTHO05D006745 3.1e-138 496.1 552 52.9
BcaC05g29746 Brassica carinata HOM05D005604 ORTHO05D006745 1.5e-137 493.8 547 53.0
CARHR081860 Cardamine hirsuta HOM05D005604 ORTHO05D006745 2.0e-137 493.4 558 52.9
Carub.0003s0673 Capsella rubella HOM05D005604 ORTHO05D006745 4.4e-137 492.3 560 52.5
AL3G18480 Arabidopsis lyrata HOM05D005604 ORTHO05D006745 5.8e-137 491.9 550 52.5
Phvul.008G130900 Phaseolus vulgaris HOM05D005604 ORTHO05D006745 9.9e-137 491.1 549 55.0
Lj1g0022594 Lotus japonicus HOM05D005604 ORTHO05D006745 3.8e-136 489.2 561 52.8
AT3G07210 Arabidopsis thaliana HOM05D005604 ORTHO05D006745 4.9e-136 488.8 553 51.9
Psat3g148680 Pisum sativum HOM05D005604 ORTHO05D006745 4.9e-136 488.8 557 52.8
Lalb_Chr13g0291101 Lupinus albus HOM05D005604 ORTHO05D006745 1.4e-135 487.3 559 53.0
arahy.Tifrunner.gnm1.ann1.6511ZK Arachis hypogaea HOM05D005604 ORTHO05D006745 2.4e-135 486.5 550 53.5
arahy.Tifrunner.gnm1.ann1.S4VI32 Arachis hypogaea HOM05D005604 ORTHO05D006745 5.4e-135 485.3 544 53.9
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 8.7e-133 478.0 691 45.3
Peaxi162Scf01312g00047 Petunia axillaris HOM05D005604 ORTHO05D006745 1.3e-131 474.2 467 58.7
PGR044G1204 Punica granatum HOM05D005604 ORTHO05D006745 3.6e-131 472.6 568 51.6
THA.LOC104802659 Tarenaya hassleriana HOM05D005604 ORTHO05D006745 4.8e-131 472.2 566 50.4
Ah.15g093490 Amaranthus hybridus HOM05D005604 ORTHO05D006745 8.1e-131 471.5 590 50.2
AUR62001131 Chenopodium quinoa HOM05D005604 ORTHO05D006745 1.8e-130 470.3 585 50.3
AUR62016550 Chenopodium quinoa HOM05D005604 ORTHO05D006745 3.1e-130 469.5 585 50.3
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 5.3e-130 468.8 690 44.6
A05p41000 Brassica napus HOM05D005604 ORTHO05D006745 5.4e-127 458.8 554 51.8
BraA05t22827Z Brassica rapa HOM05D005604 ORTHO05D006745 9.3e-127 458.0 554 51.8
Sabra02G0187000 Salix brachista HOM05D005604 ORTHO05D006745 2.1e-126 456.8 470 56.2
C05p60150 Brassica napus HOM05D005604 ORTHO05D006745 6.0e-126 455.3 547 51.6
BolC5t34666H Brassica oleracea HOM05D005604 ORTHO05D006745 6.0e-126 455.3 547 51.6
BcaC05g29850 Brassica carinata HOM05D005604 ORTHO05D006745 1.0e-125 454.5 554 51.3
Aqoxy2G03983 Aquilegia oxysepala HOM05D005604 ORTHO05D006745 3.9e-125 452.6 558 51.4
Peaxi162Scf00068g02416 Petunia axillaris HOM05D005604 ORTHO05D006745 3.3e-124 449.5 639 46.8
unitig_0.g223 Utricularia gibba HOM05D005604 ORTHO05D006745 1.3e-123 447.6 531 52.4
EL10Ac7g17895 Beta vulgaris HOM05D005604 ORTHO05D006745 2.8e-123 446.4 587 48.6
unitig_60.g25697 Utricularia gibba HOM05D005604 ORTHO05D006745 2.9e-120 436.4 547 49.7
Manes.13G049200 Manihot esculenta HOM05D005604 ORTHO05D006745 2.3e-117 426.8 453 55.6
ATR0561G172 Amborella trichopoda HOM05D005604 ORTHO05D006745 1.8e-109 400.6 559 45.1
Nn1g07990 Nelumbo nucifera HOM05D005604 ORTHO05D006745 1.5e-108 397.5 424 55.7
Zm00001eb143450 Zea mays HOM05D005604 ORTHO05D006745 1.5e-105 387.5 564 47.2
CDE05G2031 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 2.6e-105 386.7 532 45.9
HPP92_011784 Vanilla planifolia HOM05D005604 ORTHO05D006745 5.0e-104 382.5 540 46.7
DCAR_004736 Daucus carota HOM05D005604 ORTHO05D006745 1.4e-103 380.9 415 52.8
Sc05g0001960 Simmondsia chinensis HOM05D005604 ORTHO05D006745 6.3e-99 365.5 349 56.2
Os01g0917200 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 4.5e-97 359.4 513 46.0
Hund05575 Selenicereus undatus HOM05D005604 ORTHO05D006745 7.4e-92 342.0 562 41.8
SGA_v2.0_scaffold158G37516 Striga asiatica HOM05D005604 ORTHO05D006745 1.9e-87 327.4 326 55.5
Zm00001eb175070 Zea mays HOM05D005604 ORTHO05D006745 4.1e-82 309.7 548 41.6
Os08g0528800 Oryza sativa ssp. japonica HOM05D005604 ORTHO05D006745 1.7e-80 304.3 554 40.4
CAN.G1432.2 Capsicum annuum HOM05D005604 ORTHO05D006745 1.3e-72 278.1 452 42.3
CDE05G1628 Ceratophyllum demersum HOM05D005604 ORTHO05D006745 3.5e-65 253.4 343 44.6
ECA247G2712 Erigeron canadensis HOM05D005604 ORTHO05D006745 8.6e-56 222.2 149 79.2
TPR.G6488 Trifolium pratense HOM05D005604 ORTHO05D006745 1.3e-51 208.4 314 46.5
SEGI_00167 Sequoiadendron giganteum HOM05D005604 ORTHO05D006745 2.4e-42 177.6 261 39.5
DCAR_026186 Daucus carota HOM05D005604 ORTHO05D006745 5.6e-31 139.8 458 31.0
Oeu057862.1 Olea europaea HOM05D005604 ORTHO05D006745 1.4e-21 108.6 78 70.5
AagrBONN_evm.TU.Sc2ySwM_362.1199 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.2e-19 101.3 195 34.4
SMO117G0236 Selaginella moellendorffii HOM05D005604 ORTHO05D006745 3.5e-17 94.0 205 28.8
Manes.12G047141 Manihot esculenta HOM05D005604 ORTHO05D006745 7.8e-17 92.8 87 54.0
TPR.G6487 Trifolium pratense HOM05D005604 ORTHO05D006745 1.7e-16 91.7 85 56.5
AagrBONN_evm.TU.Sc2ySwM_117.906 Anthoceros agrestis HOM05D005604 ORTHO05D006745 2.3e-16 91.3 199 31.7
AagrBONN_evm.TU.Sc2ySwM_368.1401 Anthoceros agrestis HOM05D005604 ORTHO05D006745 8.7e-16 89.4 225 27.6
Gohir.A05G304001 Gossypium hirsutum HOM05D005604 ORTHO05D006745 1.6e-14 85.1 87 56.3
Hma1.2p1_1324F.1_g275630 Hydrangea macrophylla HOM05D005604 ORTHO05D006745 5.4e-10 70.1 63 58.7
QL09p051399 Quercus lobata HOM05D005604 ORTHO05D006745 3.7e-06 57.4 81 48.1


User provided reference genes

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