Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0276591 Helianthus annuus HOM05D004021 ORTHO05D003767 0.0e+00 1701.8 879 100.0
Lsat_1_v5_gn_4_94561 Lactuca sativa HOM05D004021 ORTHO05D003767 3.8e-139 500.0 993 39.0
Lsat_1_v5_gn_6_64101 Lactuca sativa HOM05D004021 ORTHO05D003767 2.8e-134 483.8 935 39.1
ECA233G1986 Erigeron canadensis HOM05D004021 ORTHO05D003767 2.5e-119 434.1 947 37.0
Lj8P589T23 Lonicera japonica HOM05D004021 ORTHO05D003767 1.4e-24 119.4 516 28.3
Lj8A589G31 Lonicera japonica HOM05D004021 ORTHO05D003767 2.0e-23 115.5 634 27.0
Dinv30267 Davidia involucrata HOM05D004021 ORTHO05D003767 3.8e-22 111.3 999 24.8
Dinv14242 Davidia involucrata HOM05D004021 ORTHO05D003767 6.0e-20 104.0 607 28.3
DCAR_007709 Daucus carota HOM05D004021 ORTHO05D003767 6.3e-17 94.0 948 23.8
Oeu031555.1 Olea europaea HOM05D004021 ORTHO05D003767 6.9e-16 90.5 969 23.2
Rhsim07G0152700 Rhododendron simsii HOM05D004021 ORTHO05D003767 6.5e-14 84.0 524 27.3
vmacro05366 Vaccinium macrocarpon HOM05D004021 ORTHO05D003767 6.5e-14 84.0 495 26.5
Oeu012193.1 Olea europaea HOM05D004021 ORTHO05D003767 7.9e-12 77.0 985 23.2
Sabra06G0188100 Salix brachista HOM05D004021 ORTHO05D003767 8.7e-11 73.6 654 24.6
Potri.006G240500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.5e-10 72.0 662 23.9
Cfa013353 Carpinus fangiana HOM05D004021 ORTHO05D003767 4.3e-10 71.2 1205 22.5
Haze_21872 Corylus avellana HOM05D004021 ORTHO05D003767 4.3e-10 71.2 525 26.3
FAN20G2231 Fragaria x ananassa HOM05D004021 ORTHO05D003767 7.4e-10 70.5 577 25.1
FAN15G2992 Fragaria x ananassa HOM05D004021 ORTHO05D003767 1.3e-09 69.7 574 24.9
FvH4_2g35880 Fragaria vesca HOM05D004021 ORTHO05D003767 2.8e-09 68.6 575 25.6
Nitab4.5_0000664g0210 Nicotiana tabacum HOM05D004021 ORTHO05D003767 8.2e-09 67.0 1124 21.4
MD08G1116300 Malus domestica HOM05D004021 ORTHO05D003767 1.1e-08 66.6 570 24.7
RcHm_v2.0_Chr6g0305941 Rosa chinensis HOM05D004021 ORTHO05D003767 1.8e-08 65.9 1199 21.3
Nitab4.5_0001567g0150 Nicotiana tabacum HOM05D004021 ORTHO05D003767 2.4e-08 65.5 1114 21.7
Peaxi162Scf00276g00210 Petunia axillaris HOM05D004021 ORTHO05D003767 3.1e-08 65.1 1125 22.8
QL12p029472 Quercus lobata HOM05D004021 ORTHO05D003767 3.1e-08 65.1 548 27.7
Duzib150G1483 Durio zibethinus HOM05D004021 ORTHO05D003767 5.3e-08 64.3 619 23.1
Duzib187G0651 Durio zibethinus HOM05D004021 ORTHO05D003767 5.3e-08 64.3 584 24.5
Gohir.A07G023000 Gossypium hirsutum HOM05D004021 ORTHO05D003767 6.9e-08 63.9 621 24.5
Migut.E01516 Erythranthe guttata HOM05D004021 ORTHO05D003767 9.1e-08 63.5 950 20.4
Actinidia15734 Actinidia chinensis HOM05D004021 ORTHO05D003767 1.5e-07 62.8 491 24.4
CiPaw.07G205800 Carya illinoinensis HOM05D004021 ORTHO05D003767 1.5e-07 62.8 496 25.4
Nitab4.5_0001567g0120 Nicotiana tabacum HOM05D004021 ORTHO05D003767 3.4e-07 61.6 450 28.0
CSS0009602 Camellia sinensis var. sinensis HOM05D004021 ORTHO05D003767 5.9e-07 60.8 523 25.0
Duzib168G2343 Durio zibethinus HOM05D004021 ORTHO05D003767 5.9e-07 60.8 587 25.2
SGA_v2.0_scaffold169G38653 Striga asiatica HOM05D004021 ORTHO05D003767 5.9e-07 60.8 173 32.4
Sabra18G0039500 Salix brachista HOM05D004021 ORTHO05D003767 1.0e-06 60.1 919 22.1
Gorai.001G027600 Gossypium raimondii HOM05D004021 ORTHO05D003767 1.3e-06 59.7 614 23.1
CAN.G309.87 Capsicum annuum HOM05D004021 ORTHO05D003767 1.7e-06 59.3 458 25.8
SGA_v2.0_scaffold163G38081 Striga asiatica HOM05D004021 ORTHO05D003767 1.7e-06 59.3 909 21.3
Potri.018G039500 Populus trichocarpa HOM05D004021 ORTHO05D003767 2.2e-06 58.9 565 24.2
Migut.A00223 Erythranthe guttata HOM05D004021 ORTHO05D003767 3.8e-06 58.2 908 20.9
Gohir.D07G026700 Gossypium hirsutum HOM05D004021 ORTHO05D003767 5.0e-06 57.8 608 24.3
Nn3g18104 Nelumbo nucifera HOM05D004021 ORTHO05D003767 5.0e-06 57.8 61 41.0


User provided reference genes

Program Settings