Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0275691 Helianthus annuus HOM05D008208 ORTHO05D010143 6.9e-269 930.2 539 100.0
ECA232G2142 Erigeron canadensis HOM05D008208 ORTHO05D010143 1.8e-62 244.6 644 41.1
Dinv30429 Davidia involucrata HOM05D008208 ORTHO05D010143 7.7e-26 122.9 279 35.5
Lj5A52T19 Lonicera japonica HOM05D008208 ORTHO05D010143 8.8e-22 109.4 624 27.2
Actinidia09010 Actinidia chinensis HOM05D008208 ORTHO05D010143 5.7e-21 106.7 598 27.6
GSVIVG01016967001 Vitis vinifera HOM05D000585 ORTHO05D001841 7.5e-21 106.3 264 34.5
Actinidia39131 Actinidia chinensis HOM05D008208 ORTHO05D010143 3.7e-20 104.0 353 32.6
Lj9A514T51 Lonicera japonica HOM05D008208 ORTHO05D010143 1.3e-17 95.5 689 26.4
DCAR_016182 Daucus carota HOM05D002915 ORTHO05D003004 1.7e-17 95.1 224 36.6
QL05p019674 Quercus lobata HOM05D008208 ORTHO05D010143 2.2e-17 94.7 240 35.8
Nitab4.5_0004969g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 5.0e-17 93.6 269 31.6
Lsat_1_v5_gn_5_134320 Lactuca sativa HOM05D008208 ORTHO05D010143 6.5e-17 93.2 531 28.8
vmacro17009 Vaccinium macrocarpon HOM05D008208 ORTHO05D010143 6.5e-17 93.2 262 33.6
CSS0036998 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 1.5e-16 92.0 673 26.3
CSS0033280 Camellia sinensis var. sinensis HOM05D008208 ORTHO05D010143 2.5e-16 91.3 662 26.1
Peaxi162Scf00038g01129 Petunia axillaris HOM05D008208 ORTHO05D010143 7.2e-16 89.7 141 41.1
Oeu024259.1 Olea europaea HOM05D008208 ORTHO05D010143 9.4e-16 89.4 332 33.7
MSTRG.11020 Avicennia marina HOM05D008208 ORTHO05D010143 5.2e-14 83.6 647 29.2
Sabra01G0150900 Salix brachista HOM05D008208 ORTHO05D010143 1.2e-13 82.4 336 31.0
PGSC0003DMG400002607 Solanum tuberosum HOM05D008208 ORTHO05D010143 3.4e-13 80.9 242 31.8
Hund07613 Selenicereus undatus HOM05D008208 ORTHO05D010143 7.5e-13 79.7 323 31.0
EL10Ac9g21199 Beta vulgaris HOM05D008208 ORTHO05D010143 1.7e-12 78.6 259 32.4
Cc04_g02470 Coffea canephora HOM05D008208 ORTHO05D010143 3.7e-12 77.4 348 28.7
Potri.001G190601 Populus trichocarpa HOM05D008208 ORTHO05D010143 4.9e-12 77.0 148 39.9
RcHm_v2.0_Chr2g0140801 Rosa chinensis HOM05D008208 ORTHO05D010143 4.9e-12 77.0 183 39.9
Duzib192G1063 Durio zibethinus HOM05D008208 ORTHO05D010143 1.4e-11 75.5 376 27.4
DCAR_023083 Daucus carota HOM05D008208 ORTHO05D010143 3.1e-11 74.3 304 28.6
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 3.1e-11 74.3 353 28.0
TAR639G0001 Trochodendron aralioides HOM05D008208 ORTHO05D010143 4.1e-11 73.9 353 27.2
Prupe.3G057400 Prunus persica HOM05D008208 ORTHO05D010143 5.4e-11 73.6 133 38.3
COL.COLO4_30526 Corchorus olitorius HOM05D008208 ORTHO05D010143 9.1e-11 72.8 381 27.8
TAR624G0194 Trochodendron aralioides HOM05D008208 ORTHO05D010143 9.1e-11 72.8 322 27.0
SGA_v2.0_scaffold265G46060 Striga asiatica HOM05D008208 ORTHO05D010143 1.2e-10 72.4 230 34.3
ECA234G0784 Erigeron canadensis HOM05D008208 ORTHO05D010143 2.0e-10 71.6 231 31.6
PSO210G2837 Papaver somniferum HOM05D029104 ORTHO05D010143 2.7e-10 71.2 136 39.7
Nitab4.5_0006022g0030 Nicotiana tabacum HOM05D008208 ORTHO05D010143 4.5e-10 70.5 632 22.8
TWI18G0382 Tripterygium wilfordii HOM05D008208 ORTHO05D010143 4.5e-10 70.5 184 29.9
Gohir.A10G065000 Gossypium hirsutum HOM05D008208 ORTHO05D010143 7.7e-10 69.7 397 24.7
PSO210G1301 Papaver somniferum HOM05D029104 ORTHO05D010143 2.3e-09 68.2 136 39.0
MBI01_g10116_MAGBIO Magnolia biondii HOM05D008208 ORTHO05D010143 3.8e-09 67.4 182 31.9
Gorai.011G070600 Gossypium raimondii HOM05D008208 ORTHO05D010143 5.0e-09 67.0 438 26.5
Aqoxy1G02129 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 6.6e-09 66.6 122 39.3
Nn8g39048 Nelumbo nucifera HOM05D008208 ORTHO05D010143 6.6e-09 66.6 160 32.5
ClCG07G013360 Citrullus lanatus HOM05D026900 ORTHO05D010143 8.6e-09 66.2 264 29.9
Ciclev10025127m.g Citrus clementina HOM05D008208 ORTHO05D010143 1.1e-08 65.9 362 28.7
Manes.11G032600 Manihot esculenta HOM05D008208 ORTHO05D010143 2.5e-08 64.7 640 22.7
Sopen03g039910 Solanum pennellii HOM05D008208 ORTHO05D010143 2.5e-08 64.7 355 25.9
Sed0025504 Sechium edule HOM05D026900 ORTHO05D010143 5.6e-08 63.5 327 27.8
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 7.2e-08 63.2 154 33.8
Aqoxy1G02121 Aquilegia oxysepala HOM05D057169 ORTHO05D010143 9.5e-08 62.8 110 40.0
CsaV3_3G023500 Cucumis sativus L. HOM05D026900 ORTHO05D010143 1.2e-07 62.4 280 26.4
Migut.I00959 Erythranthe guttata HOM05D008208 ORTHO05D010143 1.6e-07 62.0 338 26.6
CDE02G2770 Ceratophyllum demersum HOM05D046919 ORTHO05D043903 2.1e-07 61.6 134 34.3
Nn6g35343 Nelumbo nucifera HOM05D008208 ORTHO05D010143 2.1e-07 61.6 271 27.7
unitig_37.g12263 Utricularia gibba HOM05D008208 ORTHO05D010143 2.1e-07 61.6 147 32.0
PGR102G1678 Punica granatum HOM05D008208 ORTHO05D010143 2.8e-07 61.2 115 39.1
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 3.6e-07 60.8 202 29.7
CiPaw.02G145300 Carya illinoinensis HOM05D008208 ORTHO05D010143 4.7e-07 60.5 194 29.9
MD09G1201800 Malus domestica HOM05D008208 ORTHO05D010143 4.7e-07 60.5 357 26.1
Thecc.06G101100 Theobroma cacao HOM05D008208 ORTHO05D010143 6.1e-07 60.1 343 24.2
MD17G1181700 Malus domestica HOM05D008208 ORTHO05D010143 8.0e-07 59.7 337 27.3
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 1.0e-06 59.3 174 29.9
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 1.4e-06 58.9 215 29.3
CANSAT56G0900 Cannabis sativa HOM05D008208 ORTHO05D010143 1.8e-06 58.5 651 23.8
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 1.8e-06 58.5 204 26.5
MELO3C013005.2 Cucumis melo HOM05D026900 ORTHO05D010143 2.3e-06 58.2 169 35.5
SEGI_16491 Sequoiadendron giganteum HOM05D004628 ORTHO05D005166 3.0e-06 57.8 202 26.2
Os01g0765500 Oryza sativa ssp. japonica HOM05D020829 ORTHO05D023022 4.0e-06 57.4 76 44.7
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 8.9e-06 56.2 219 28.8


User provided reference genes

Program Settings