Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0274781 Helianthus annuus HOM05D003361 ORTHO05D003760 1.3e-163 580.5 518 100.0
Lj9A497T71 Lonicera japonica HOM05D003361 ORTHO05D003760 2.7e-60 237.3 372 66.9
SalBow7G0810 Salvia bowleyana HOM05D003361 ORTHO05D003760 9.0e-56 222.2 369 64.8
Rhsim12G0189300 Rhododendron simsii HOM05D003361 ORTHO05D003760 2.2e-54 217.6 535 40.6
Gorai.011G085800 Gossypium raimondii HOM05D003361 ORTHO05D003760 7.1e-53 212.6 378 62.2
Nitab4.5_0001017g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 7.1e-53 212.6 365 64.7
CANSAT56G3261 Cannabis sativa HOM05D003361 ORTHO05D003760 3.5e-52 210.3 359 64.9
ECA246G4877 Erigeron canadensis HOM05D003361 ORTHO05D003760 1.1e-50 205.3 171 61.4
Lsat_1_v5_gn_5_8861 Lactuca sativa HOM05D003361 ORTHO05D003760 5.6e-50 203.0 170 60.6
HanXRQChr17g0570311 Helianthus annuus HOM05D003361 ORTHO05D003760 2.1e-49 201.1 307 73.0
Nitab4.5_0002322g0060 Nicotiana tabacum HOM05D003361 ORTHO05D003760 4.8e-49 199.9 379 47.5
Sopen03g036300 Solanum pennellii HOM05D003361 ORTHO05D003760 1.1e-48 198.7 168 57.7
Solyc03g117420.4 Solanum lycopersicum HOM05D003361 ORTHO05D003760 6.9e-48 196.1 168 57.1
CAN.G407.25 Capsicum annuum HOM05D003361 ORTHO05D003760 1.5e-47 194.9 168 56.5
TAR383G0111 Trochodendron aralioides HOM05D003361 ORTHO05D003760 2.0e-47 194.5 170 57.1
Cc04_g04660 Coffea canephora HOM05D003361 ORTHO05D003760 7.6e-47 192.6 170 56.5
Dinv30637 Davidia involucrata HOM05D003361 ORTHO05D003760 7.6e-47 192.6 170 56.5
Hma1.2p1_0461F.1_g157700 Hydrangea macrophylla HOM05D003361 ORTHO05D003760 1.3e-46 191.8 170 58.2
TWI75G0489 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 2.2e-46 191.0 169 56.2
SalBow7G3482 Salvia bowleyana HOM05D003361 ORTHO05D003760 2.9e-46 190.7 170 54.7
MSTRG.22764 Avicennia marina HOM05D003361 ORTHO05D003760 6.4e-46 189.5 169 54.4
Ciclev10025249m.g Citrus clementina HOM05D003361 ORTHO05D003760 1.1e-45 188.7 170 55.9
CSS0014218 Camellia sinensis var. sinensis HOM05D003361 ORTHO05D003760 1.4e-45 188.3 170 55.9
Haze_16605 Corylus avellana HOM05D003361 ORTHO05D003760 1.9e-45 188.0 170 56.5
Peaxi162Scf00332g00127 Petunia axillaris HOM05D003361 ORTHO05D003760 2.4e-45 187.6 167 56.9
Atru.chr1.2849 Acer truncatum HOM05D003361 ORTHO05D003760 4.2e-45 186.8 170 54.1
GSVIVG01017472001 Vitis vinifera HOM05D003361 ORTHO05D003760 5.5e-45 186.4 170 55.9
COL.COLO4_11855 Corchorus olitorius HOM05D003361 ORTHO05D003760 9.3e-45 185.7 170 56.5
Lsat_1_v5_gn_4_88160 Lactuca sativa HOM05D003361 ORTHO05D003988 1.2e-44 185.3 120 71.7
TAR626G1829 Trochodendron aralioides HOM05D003361 ORTHO05D003760 1.2e-44 185.3 170 54.7
Actinidia15974 Actinidia chinensis HOM05D003361 ORTHO05D003760 2.1e-44 184.5 169 55.0
QL05p032608 Quercus lobata HOM05D003361 ORTHO05D003760 2.1e-44 184.5 169 54.4
AUR62020008 Chenopodium quinoa HOM05D003361 ORTHO05D003760 4.6e-44 183.3 171 56.1
Manes.11G061100 Manihot esculenta HOM05D003361 ORTHO05D003760 4.6e-44 183.3 170 56.5
CiPaw.02G158600 Carya illinoinensis HOM05D003361 ORTHO05D003760 6.0e-44 183.0 169 56.2
AT1G15740 Arabidopsis thaliana HOM05D003361 ORTHO05D003760 7.9e-44 182.6 169 53.8
Duzib235G0043 Durio zibethinus HOM05D003361 ORTHO05D003760 7.9e-44 182.6 169 54.4
Hund00496 Selenicereus undatus HOM05D003361 ORTHO05D003760 1.0e-43 182.2 168 56.0
BcaC05g25516 Brassica carinata HOM05D003361 ORTHO05D003760 1.3e-43 181.8 169 53.8
AL1G27850 Arabidopsis lyrata HOM05D003361 ORTHO05D003760 2.3e-43 181.0 169 53.8
Sp1g14030 Schrenkiella parvula HOM05D003361 ORTHO05D003760 2.3e-43 181.0 169 53.8
Thecc.06G033100 Theobroma cacao HOM05D003361 ORTHO05D003760 3.0e-43 180.6 168 53.6
AUR62011226 Chenopodium quinoa HOM05D003361 ORTHO05D003760 3.9e-43 180.3 171 55.0
ClCG09G003110 Citrullus lanatus HOM05D003361 ORTHO05D003760 3.9e-43 180.3 172 51.7
THA.LOC104808198 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 3.9e-43 180.3 367 52.6
FAN09G2631 Fragaria x ananassa HOM05D003361 ORTHO05D003760 5.1e-43 179.9 169 55.0
Prupe.3G092900 Prunus persica HOM05D003361 ORTHO05D003760 5.1e-43 179.9 314 67.8
RcHm_v2.0_Chr2g0134401 Rosa chinensis HOM05D003361 ORTHO05D003760 5.1e-43 179.9 367 52.9
SGA_v2.0_scaffold37G14747 Striga asiatica HOM05D003361 ORTHO05D003760 5.1e-43 179.9 171 54.4
Duzib160G0541 Durio zibethinus HOM05D003361 ORTHO05D003760 6.7e-43 179.5 169 53.3
FvH4_6g29180 Fragaria vesca HOM05D003361 ORTHO05D003760 6.7e-43 179.5 169 55.0
FAN02G1685 Fragaria x ananassa HOM05D003361 ORTHO05D003760 6.7e-43 179.5 169 55.0
FAN14G3167 Fragaria x ananassa HOM05D003361 ORTHO05D003760 6.7e-43 179.5 169 55.0
Sc08g0006030 Simmondsia chinensis HOM05D003361 ORTHO05D003760 6.7e-43 179.5 171 53.8
FAN05G3872 Fragaria x ananassa HOM05D003361 ORTHO05D003760 1.1e-42 178.7 169 54.4
CiPaw.01G250600 Carya illinoinensis HOM05D003361 ORTHO05D003760 1.5e-42 178.3 170 54.7
Thhalv10007169m.g Eutrema salsugineum HOM05D003361 ORTHO05D003760 1.5e-42 178.3 170 53.5
Oeu029903.1 Olea europaea HOM05D003361 ORTHO05D003760 1.5e-42 178.3 170 54.1
C05p13880 Brassica napus HOM05D003361 ORTHO05D003760 1.9e-42 177.9 169 52.7
BolC5t30122H Brassica oleracea HOM05D003361 ORTHO05D003760 1.9e-42 177.9 169 52.7
TWI12G0888 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 1.9e-42 177.9 169 53.8
PGR031G1162 Punica granatum HOM05D003361 ORTHO05D003760 2.5e-42 177.6 169 54.4
DCAR_025527 Daucus carota HOM05D003361 ORTHO05D003760 3.3e-42 177.2 170 53.5
A06p11730 Brassica napus HOM05D003361 ORTHO05D003760 5.6e-42 176.4 169 52.1
BraA06t24343Z Brassica rapa HOM05D003361 ORTHO05D003760 5.6e-42 176.4 169 52.1
Migut.I00738 Erythranthe guttata HOM05D003361 ORTHO05D003760 5.6e-42 176.4 171 52.6
Carub.0001s1551 Capsella rubella HOM05D003361 ORTHO05D003760 9.6e-42 175.6 169 53.3
Cpa.g.sc46.67 Carica papaya HOM05D003361 ORTHO05D003760 9.6e-42 175.6 169 53.8
Aa31LG7G360 Aethionema arabicum HOM05D003361 ORTHO05D003760 1.6e-41 174.9 169 51.5
vmacro16874 Vaccinium macrocarpon HOM05D003361 ORTHO05D003760 3.7e-41 173.7 323 52.3
CARHR016230 Cardamine hirsuta HOM05D003361 ORTHO05D003760 4.8e-41 173.3 169 51.5
MD15G1162400 Malus domestica HOM05D003361 ORTHO05D003760 4.8e-41 173.3 171 53.8
TWI32G1011 Tripterygium wilfordii HOM05D003361 ORTHO05D003760 1.1e-40 172.2 170 51.2
Manes.04G108700 Manihot esculenta HOM05D003361 ORTHO05D003760 1.4e-40 171.8 169 52.7
RcHm_v2.0_Chr2g0087081 Rosa chinensis HOM05D003361 ORTHO05D003760 1.8e-40 171.4 172 50.6
Sed0010441 Sechium edule HOM05D003361 ORTHO05D003760 1.8e-40 171.4 369 48.2
Aqoxy7G02456 Aquilegia oxysepala HOM05D003361 ORTHO05D003760 2.4e-40 171.0 317 68.1
Lalb_Chr01g0012261 Lupinus albus HOM05D003361 ORTHO05D003760 2.4e-40 171.0 169 53.3
THA.LOC104812464 Tarenaya hassleriana HOM05D003361 ORTHO05D003760 2.4e-40 171.0 168 51.2
MELO3C023445.2 Cucumis melo HOM05D003361 ORTHO05D003760 3.1e-40 170.6 172 50.0
MBI14_g24987_MAGBIO Magnolia biondii HOM05D003361 ORTHO05D003760 3.1e-40 170.6 170 52.4
Glyma.07G028300 Glycine max HOM05D003361 ORTHO05D003760 4.0e-40 170.2 169 52.1
Medtr4g116170 Medicago truncatula HOM05D003361 ORTHO05D003760 4.0e-40 170.2 168 53.0
arahy.Tifrunner.gnm1.ann1.NFA80P Arachis hypogaea HOM05D003361 ORTHO05D003760 5.3e-40 169.9 169 53.3
Psat7g257800 Pisum sativum HOM05D003361 ORTHO05D003760 5.3e-40 169.9 169 51.5
Prupe.7G252400 Prunus persica HOM05D003361 ORTHO05D003760 5.3e-40 169.9 169 55.0
Atru.chr7.2012 Acer truncatum HOM05D003361 ORTHO05D003760 6.9e-40 169.5 314 67.8
arahy.Tifrunner.gnm1.ann1.JM4LQW Arachis hypogaea HOM05D003361 ORTHO05D003760 6.9e-40 169.5 171 53.2
arahy.Tifrunner.gnm1.ann1.MWAB5B Arachis hypogaea HOM05D003361 ORTHO05D003760 6.9e-40 169.5 171 53.2
EL10Ac8g18785 Beta vulgaris HOM05D003361 ORTHO05D003760 9.0e-40 169.1 171 52.6
CsaV3_7G032160 Cucumis sativus L. HOM05D003361 ORTHO05D003760 9.0e-40 169.1 170 50.0
TPR.G7990 Trifolium pratense HOM05D003361 ORTHO05D003760 9.0e-40 169.1 169 53.8
GSVIVG01012857001 Vitis vinifera HOM05D003361 ORTHO05D003760 9.0e-40 169.1 170 52.4
Lj4g0018391 Lotus japonicus HOM05D003361 ORTHO05D003760 1.2e-39 168.7 170 52.4
Lalb_Chr12g0198401 Lupinus albus HOM05D003361 ORTHO05D003760 1.2e-39 168.7 170 53.5
Nn8g39646 Nelumbo nucifera HOM05D003361 ORTHO05D003760 1.5e-39 168.3 169 53.8
Gohir.D10G079000 Gossypium hirsutum HOM05D003361 ORTHO05D003760 2.0e-39 167.9 169 51.5
Glyma.08G214500 Glycine max HOM05D003361 ORTHO05D003760 2.6e-39 167.5 169 52.7
Ca_12515_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 3.4e-39 167.2 169 50.9
Gohir.A08G090300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.4e-39 167.2 170 51.2
Gohir.A10G072100 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.4e-39 167.2 169 51.5
Gohir.D08G101300 Gossypium hirsutum HOM05D003361 ORTHO05D003760 3.4e-39 167.2 170 51.8
Gorai.004G109300 Gossypium raimondii HOM05D003361 ORTHO05D003760 3.4e-39 167.2 170 51.8
Phvul.010G157600 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 3.4e-39 167.2 169 52.1
Sed0016861 Sechium edule HOM05D003361 ORTHO05D003760 3.4e-39 167.2 172 50.6
TPR.G38632 Trifolium pratense HOM05D003361 ORTHO05D003760 5.8e-39 166.4 169 50.3
Hund21595 Selenicereus undatus HOM05D003361 ORTHO05D003760 1.0e-38 165.6 171 52.6
MSTRG.11160 Avicennia marina HOM05D003361 ORTHO05D003760 2.2e-38 164.5 172 50.6
Glyma.17G107400 Glycine max HOM05D003361 ORTHO05D003760 2.9e-38 164.1 172 51.7
Lj3g0011414 Lotus japonicus HOM05D003361 ORTHO05D003760 3.8e-38 163.7 169 51.5
MD02G1018400 Malus domestica HOM05D003361 ORTHO05D003760 3.8e-38 163.7 171 52.0
Thecc.09G137400 Theobroma cacao HOM05D003361 ORTHO05D003760 3.8e-38 163.7 170 51.2
VMungo0331G0010 Vigna mungo HOM05D003361 ORTHO05D003760 8.4e-38 162.5 152 53.9
Dinv41445 Davidia involucrata HOM05D003361 ORTHO05D003760 1.1e-37 162.2 172 52.9
Ca_21637_v3 Cicer arietinum L. HOM05D003361 ORTHO05D003760 1.4e-37 161.8 170 50.6
COL.COLO4_33367 Corchorus olitorius HOM05D003361 ORTHO05D003760 1.4e-37 161.8 170 49.4
Glyma.13G163500 Glycine max HOM05D003361 ORTHO05D003760 1.4e-37 161.8 170 51.2
Medtr4g009873 Medicago truncatula HOM05D003361 ORTHO05D003760 1.4e-37 161.8 167 49.7
HPP92_017331 Vanilla planifolia HOM05D003361 ORTHO05D003760 2.5e-37 161.0 171 51.5
Phvul.003G172400 Phaseolus vulgaris HOM05D003361 ORTHO05D003760 3.2e-37 160.6 164 53.0
Eucgr.J03087 Eucalyptus grandis HOM05D003361 ORTHO05D003760 9.3e-37 159.1 169 48.5
FvH4_1g02020 Fragaria vesca HOM05D003361 ORTHO05D003760 1.2e-36 158.7 174 48.9
arahy.Tifrunner.gnm1.ann1.H7Z4S8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.6e-36 158.3 170 50.6
arahy.Tifrunner.gnm1.ann1.T3C7Q8 Arachis hypogaea HOM05D003361 ORTHO05D003760 1.6e-36 158.3 170 50.6
QL02p090717 Quercus lobata HOM05D003361 ORTHO05D003760 1.6e-36 158.3 170 49.4
Dinv36449 Davidia involucrata HOM05D003361 ORTHO05D003760 3.5e-36 157.1 170 51.2
Psat0s571g0080 Pisum sativum HOM05D003361 ORTHO05D003760 3.5e-36 157.1 168 49.4
FAN28G0525 Fragaria x ananassa HOM05D003361 ORTHO05D003760 6.0e-36 156.4 173 49.1
Potri.006G061700 Populus trichocarpa HOM05D003361 ORTHO05D003760 6.0e-36 156.4 168 50.6
FAN19G1251 Fragaria x ananassa HOM05D002026 ORTHO05D002291 1.0e-35 155.6 181 45.9
Manes.14G119228 Manihot esculenta HOM05D003361 ORTHO05D003760 1.3e-35 155.2 168 48.8
ATR0767G175 Amborella trichopoda HOM05D003361 ORTHO05D003760 2.3e-35 154.5 170 47.6
Nn2g12188 Nelumbo nucifera HOM05D003361 ORTHO05D003760 3.0e-35 154.1 165 50.9
CDE05G0968 Ceratophyllum demersum HOM05D003361 ORTHO05D003760 3.9e-35 153.7 166 48.8
CANSAT11G0288 Cannabis sativa HOM05D003361 ORTHO05D003760 6.7e-35 152.9 170 48.2
SHI02098 Sapria himalayana HOM05D003361 ORTHO05D003760 7.4e-34 149.4 170 48.2
Sabra06G0044400 Salix brachista HOM05D003361 ORTHO05D003760 6.3e-33 146.4 169 49.1
Os02g0613200 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 8.2e-33 146.0 171 45.6
SEGI_28212 Sequoiadendron giganteum HOM05D003361 ORTHO05D003760 1.1e-32 145.6 224 54.9
Nitab4.5_0002286g0090 Nicotiana tabacum HOM05D003361 ORTHO05D003760 1.4e-32 145.2 151 48.3
Ah.09g224100 Amaranthus hybridus HOM05D003361 ORTHO05D003760 3.1e-32 144.1 171 47.4
PSO017G3211 Papaver somniferum HOM05D003361 ORTHO05D003760 2.0e-31 141.4 176 47.2
Psat1g109200 Pisum sativum HOM05D003361 ORTHO05D003760 2.6e-31 141.0 168 46.4
Solyc12g009870.2 Solanum lycopersicum HOM05D003361 ORTHO05D003760 4.5e-31 140.2 170 45.9
CAN.G1281.4 Capsicum annuum HOM05D003361 ORTHO05D003760 5.9e-31 139.8 170 45.9
Peaxi162Scf01694g00019 Petunia axillaris HOM05D003361 ORTHO05D003760 1.0e-30 139.0 151 47.7
PGSC0003DMG400007912 Solanum tuberosum HOM05D003361 ORTHO05D003760 1.3e-30 138.7 170 45.3
PSO170G6803 Papaver somniferum HOM05D003361 ORTHO05D003760 1.7e-30 138.3 177 46.3
Zm00001eb247040 Zea mays HOM05D003361 ORTHO05D003760 2.2e-30 137.9 169 44.4
Solyc07g007420.3 Solanum lycopersicum HOM05D003361 ORTHO05D003760 8.5e-30 136.0 152 48.0
Os04g0503500 Oryza sativa ssp. japonica HOM05D003361 ORTHO05D003760 1.4e-29 135.2 170 41.8
Sopen07g003470 Solanum pennellii HOM05D003361 ORTHO05D003760 1.9e-29 134.8 152 48.0
Zm00001eb078100 Zea mays HOM05D003361 ORTHO05D003760 1.9e-29 134.8 169 43.2
Cc06_g07660 Coffea canephora HOM05D003361 ORTHO05D003760 5.5e-29 133.3 169 45.0
Lj3g0027196 Lotus japonicus HOM05D003361 ORTHO05D003760 2.1e-28 131.3 147 45.6
Nitab4.5_0009284g0020 Nicotiana tabacum HOM05D003361 ORTHO05D003760 7.9e-28 129.4 119 52.1
PGSC0003DMG400030688 Solanum tuberosum HOM05D003361 ORTHO05D003760 1.8e-27 128.3 118 51.7
Peaxi162Scf00088g00618 Petunia axillaris HOM05D003361 ORTHO05D003760 3.7e-25 120.6 169 42.6
Glyma.13G367200 Glycine max HOM05D003361 ORTHO05D003760 8.2e-25 119.4 132 48.5
AagrBONN_evm.TU.Sc2ySwM_362.1382 Anthoceros agrestis HOM05D003361 ORTHO05D003760 6.9e-24 116.3 169 38.5
MD17G1217000 Malus domestica HOM05D003361 ORTHO05D003760 1.5e-23 115.2 95 58.9
Mapoly0032s0095 Marchantia polymorpha HOM05D003361 ORTHO05D003760 1.5e-23 115.2 145 40.7
Nitab4.5_0002329g0140 Nicotiana tabacum HOM05D003361 ORTHO05D003760 3.4e-23 114.0 164 39.6
SMO200G0229 Selaginella moellendorffii HOM05D003361 ORTHO05D003760 1.7e-22 111.7 170 38.2
Pp3c4_3150 Physcomitrium patens HOM05D003361 ORTHO05D003760 2.2e-22 111.3 121 41.3
arahy.Tifrunner.gnm1.ann1.TB3UR8 Arachis hypogaea HOM05D003361 ORTHO05D003760 2.9e-22 110.9 104 51.9
arahy.Tifrunner.gnm1.ann1.YII6YD Arachis hypogaea HOM05D003361 ORTHO05D003760 2.9e-22 110.9 104 51.9
Nitab4.5_0008536g0030 Nicotiana tabacum HOM05D003361 ORTHO05D003760 5.0e-22 110.2 170 40.6
Duzib150G0304 Durio zibethinus HOM05D003361 ORTHO05D003760 1.1e-21 109.0 95 56.8
Pp3c8_1510 Physcomitrium patens HOM05D003361 ORTHO05D003760 4.2e-21 107.1 177 35.0
Duzib187G1093 Durio zibethinus HOM05D003361 ORTHO05D003760 1.6e-20 105.1 95 54.7
unitig_699.g19089 Utricularia gibba HOM05D003361 ORTHO05D003760 3.1e-16 90.9 120 43.3
SGA_v2.0_scaffold11G05885 Striga asiatica HOM05D003361 ORTHO05D003760 1.9e-13 81.6 147 39.5
Psat0s520g0120 Pisum sativum HOM05D003361 ORTHO05D003760 4.7e-12 77.0 59 59.3
Glyma.15G006200 Glycine max HOM05D003361 ORTHO05D003760 5.2e-11 73.6 94 43.6
Actinidia08955 Actinidia chinensis HOM05D003361 ORTHO05D003760 2.2e-09 68.2 46 63.0
Oeu027837.1 Olea europaea HOM05D003361 ORTHO05D003760 2.8e-09 67.8 47 66.0
MCO10G095 Micromonas commoda HOM05D003361 ORTHO05D003760 9.1e-08 62.8 86 37.2
CAN.G509.10 Capsicum annuum HOM05D003361 ORTHO05D003760 2.9e-06 57.8 51 49.0


User provided reference genes

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