Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 1.1e-227 793.1 433 100.0
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 1.4e-179 633.3 441 76.0
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 1.9e-168 596.3 431 77.7
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.4e-147 526.9 408 69.4
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 5.1e-145 518.5 428 65.9
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.4e-142 509.6 407 67.3
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 5.2e-142 508.4 429 69.7
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 5.2e-142 508.4 407 67.1
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 2.0e-141 506.5 408 67.9
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 2.6e-141 506.1 423 66.7
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 4.4e-141 505.4 408 69.1
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 9.9e-141 504.2 433 65.4
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.2e-140 503.1 407 69.0
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 2.9e-140 502.7 409 67.7
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 1.1e-139 500.7 408 67.2
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 2.4e-139 499.6 410 68.8
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 5.4e-139 498.4 429 64.1
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 7.1e-139 498.0 409 66.5
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 4.6e-138 495.4 411 66.7
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.3e-137 493.8 409 67.5
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.3e-137 493.0 407 66.6
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.3e-137 493.0 409 67.2
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 3.0e-137 492.7 427 64.4
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 5.1e-137 491.9 410 65.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 6.6e-137 491.5 429 68.1
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.5e-136 490.3 410 66.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 7.3e-136 488.0 409 66.5
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 3.6e-135 485.7 404 67.3
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 8.1e-135 484.6 408 68.9
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.4e-134 483.8 418 67.2
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 1.4e-134 483.8 429 63.9
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.4e-134 483.0 407 68.3
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 3.1e-134 482.6 407 66.8
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 4.0e-134 482.3 408 65.0
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 6.9e-134 481.5 408 65.9
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 6.9e-134 481.5 408 65.4
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 9.0e-134 481.1 408 68.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 5.8e-133 478.4 404 65.8
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 9.9e-133 477.6 452 58.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.7e-132 476.9 407 63.9
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 4.9e-132 475.3 411 65.5
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 6.4e-132 474.9 415 65.1
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.1e-131 474.2 421 64.1
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.4e-131 473.8 432 63.0
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 1.4e-131 473.8 430 63.5
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 9.3e-131 471.1 407 61.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 9.3e-131 471.1 412 61.9
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.3e-129 467.2 437 59.3
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.7e-129 466.8 407 62.4
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.7e-129 466.8 410 66.1
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 3.0e-129 466.1 418 62.4
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.7e-129 464.5 408 63.7
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 2.5e-128 463.0 433 60.7
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 2.5e-128 463.0 433 61.7
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.3e-128 462.2 434 61.1
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 7.3e-128 461.5 410 62.9
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.8e-127 459.5 408 62.0
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 9.0e-126 454.5 412 61.2
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.0e-126 454.5 410 60.5
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.2e-125 454.1 410 59.3
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 1.5e-125 453.8 410 59.8
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 2.0e-125 453.4 341 71.6
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 2.6e-125 453.0 427 61.4
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.9e-124 449.5 420 60.7
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 2.9e-124 449.5 414 64.3
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 3.8e-124 449.1 432 60.2
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 6.4e-124 448.4 391 63.2
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 8.4e-124 448.0 412 61.2
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.3e-121 439.9 435 57.7
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 4.3e-120 435.6 435 57.5
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 4.3e-120 435.6 392 61.2
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.3e-120 435.6 438 59.4
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 9.6e-120 434.5 401 62.8
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 1.6e-119 433.7 365 65.8
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 6.2e-119 431.8 432 58.6
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 1.8e-118 430.3 419 57.0
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 4.0e-118 429.1 343 69.1
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 5.3e-118 428.7 420 58.1
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.5e-117 427.2 423 57.4
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.5e-117 427.2 423 57.4
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.6e-117 426.4 422 58.8
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 5.8e-117 425.2 420 59.3
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 1.0e-116 424.5 423 56.5
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 1.0e-116 424.5 423 56.5
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.0e-116 424.5 352 65.3
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 1.3e-116 424.1 301 72.8
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 1.1e-115 421.0 343 67.1
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.4e-115 420.6 416 60.1
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 3.2e-115 419.5 424 59.2
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.1e-114 416.8 416 56.2
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 6.0e-114 415.2 424 58.5
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 1.0e-113 414.5 320 71.6
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 2.3e-113 413.3 417 59.2
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 3.9e-113 412.5 455 57.4
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 5.1e-113 412.1 358 63.4
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.1e-112 411.0 416 59.1
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.1e-112 411.0 416 59.1
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 1.3e-111 407.5 421 58.7
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 1.6e-111 407.1 356 64.9
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 3.7e-111 406.0 431 58.7
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 6.2e-111 405.2 420 57.4
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 6.2e-111 405.2 420 58.6
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 3.1e-110 402.9 363 64.5
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 2.0e-109 400.2 410 56.6
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 5.8e-109 398.7 346 61.6
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 7.6e-109 398.3 405 57.5
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.2e-106 391.0 374 56.1
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.9e-105 386.0 412 55.6
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 6.7e-105 385.2 412 55.3
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.5e-104 383.3 424 52.1
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 4.3e-104 382.5 416 55.3
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.4e-104 381.7 416 55.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.3e-103 378.6 413 53.0
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-99 367.9 428 50.9
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 2.0e-96 357.1 353 55.5
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 5.0e-92 342.4 339 59.0
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.0e-92 342.4 401 50.1
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.2e-90 337.8 340 59.4
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 6.7e-89 332.0 432 47.7
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 9.7e-88 328.2 343 50.7
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.2e-87 327.0 352 53.4
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 5.3e-86 322.4 337 51.9
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-83 313.5 161 89.4
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 4.7e-82 309.3 345 51.9
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 3.9e-81 306.2 180 83.3
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.3e-79 301.2 318 51.3
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.2e-79 300.4 363 49.6
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 6.3e-71 272.3 328 54.3
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 5.0e-68 262.7 311 54.0
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 2.5e-67 260.4 315 55.2
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 7.0e-62 242.3 142 81.0
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 9.8e-56 221.9 303 50.2
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 3.5e-53 213.4 126 79.4
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 1.3e-52 211.5 103 92.2
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 4.9e-47 193.0 174 59.8
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 4.1e-46 189.9 112 75.0
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.8e-42 177.2 244 48.8
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 6.2e-42 176.0 335 34.9
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 2.2e-39 167.5 85 88.2
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 1.2e-37 161.8 272 38.2
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-33 148.7 167 50.9
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.2e-24 118.6 103 55.3
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 3.2e-14 84.0 127 44.1
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 3.2e-14 84.0 83 47.0


User provided reference genes

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