Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 3.0e-262 907.9 432 100.0
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.3e-164 583.6 318 85.2
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 4.5e-162 575.1 319 85.0
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 3.1e-158 562.4 319 83.1
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 3.2e-155 552.4 320 79.7
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 7.8e-154 547.7 325 77.2
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 5.0e-153 545.0 324 77.2
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 5.0e-153 545.0 321 77.6
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 4.0e-150 535.4 319 76.5
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 4.4e-149 531.9 320 76.6
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 3.7e-148 528.9 318 76.1
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 1.4e-147 526.9 320 73.8
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.4e-147 526.2 318 76.1
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 4.1e-147 525.4 318 75.8
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 9.2e-147 524.2 317 77.0
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 2.7e-146 522.7 308 76.3
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 2.7e-146 522.7 319 75.5
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 4.6e-146 521.9 318 73.9
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.7e-145 520.0 321 76.0
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 3.0e-145 519.2 321 74.1
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 5.1e-145 518.5 321 75.4
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 6.6e-145 518.1 308 75.3
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 8.6e-145 517.7 322 73.9
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 1.5e-144 516.9 318 74.5
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 4.3e-144 515.4 320 72.5
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 5.6e-144 515.0 319 74.0
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.6e-144 515.0 319 74.0
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 5.6e-144 515.0 319 74.0
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 7.3e-144 514.6 319 73.7
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 9.5e-144 514.2 321 74.1
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.1e-143 513.1 319 74.0
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.1e-142 510.8 320 72.5
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 3.1e-142 509.2 319 72.1
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 4.0e-142 508.8 320 71.6
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 5.2e-142 508.4 319 73.7
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 6.8e-142 508.1 311 72.7
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 8.9e-142 507.7 321 72.0
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 1.5e-141 506.9 319 71.5
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 2.0e-141 506.5 319 70.8
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 2.0e-141 506.5 319 73.7
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 3.4e-141 505.8 310 72.3
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 3.4e-141 505.8 310 72.3
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 1.7e-140 503.4 319 71.2
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 2.2e-140 503.1 310 71.9
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 2.2e-140 503.1 321 71.3
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 2.2e-140 503.1 339 67.8
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 2.9e-140 502.7 321 72.6
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 4.9e-140 501.9 319 71.8
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 6.4e-140 501.5 322 69.9
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 6.4e-140 501.5 321 72.6
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 8.3e-140 501.1 314 71.3
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 8.3e-140 501.1 328 71.0
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 8.3e-140 501.1 321 72.3
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 3.2e-139 499.2 314 71.0
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 4.1e-139 498.8 320 71.2
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 5.4e-139 498.4 307 72.6
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 5.4e-139 498.4 323 69.7
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.2e-138 497.3 325 69.5
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.2e-138 497.3 307 72.0
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 1.6e-138 496.9 318 71.4
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.1e-138 496.5 312 69.9
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 2.1e-138 496.5 310 71.3
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 2.1e-138 496.5 320 70.3
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 3.5e-138 495.7 319 69.9
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 4.6e-138 495.4 314 70.4
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 4.6e-138 495.4 307 72.3
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 6.0e-138 495.0 321 71.7
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.7e-137 493.4 314 69.7
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 1.7e-137 493.4 321 71.7
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 2.3e-137 493.0 322 69.3
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 6.6e-137 491.5 319 71.5
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 6.6e-137 491.5 314 72.0
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 8.6e-137 491.1 306 73.9
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 1.5e-136 490.3 315 71.4
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.9e-136 490.0 305 71.8
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.9e-136 490.0 306 72.9
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 1.9e-136 490.0 318 71.4
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 3.3e-136 489.2 321 71.0
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 3.3e-136 489.2 321 71.0
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 4.3e-136 488.8 318 69.5
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 9.5e-136 487.6 311 71.1
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 9.5e-136 487.6 330 68.5
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 9.5e-136 487.6 318 70.4
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 1.2e-135 487.3 303 71.6
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 1.2e-135 487.3 303 71.3
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.6e-135 486.9 318 69.5
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.6e-135 486.9 309 70.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 1.6e-135 486.9 308 72.1
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 2.1e-135 486.5 322 68.0
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.1e-135 486.5 314 70.1
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 2.8e-135 486.1 318 69.2
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 4.7e-135 485.3 321 68.2
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 6.2e-135 485.0 319 68.3
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 8.1e-135 484.6 303 71.3
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 1.1e-134 484.2 314 70.4
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.4e-134 483.0 321 69.5
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.0e-134 482.3 317 70.0
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 4.0e-134 482.3 314 69.4
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.0e-134 482.3 306 72.2
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 5.2e-134 481.9 303 71.3
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 5.2e-134 481.9 306 71.9
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 8.9e-134 481.1 303 71.0
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 8.9e-134 481.1 307 71.0
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.5e-133 480.3 304 71.1
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 3.4e-133 479.2 304 70.7
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 3.4e-133 479.2 354 64.1
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 3.4e-133 479.2 306 71.2
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 5.8e-133 478.4 303 70.6
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 7.6e-133 478.0 304 70.7
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 7.6e-133 478.0 306 71.6
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.3e-132 477.2 304 71.1
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 1.7e-132 476.9 303 70.0
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 6.4e-132 474.9 310 66.8
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 8.4e-132 474.6 314 69.7
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.6e-130 470.3 308 69.2
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.6e-130 468.8 318 67.6
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 8.7e-129 464.5 289 72.3
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 8.7e-129 464.5 295 71.9
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.5e-128 463.0 319 64.6
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 2.5e-128 463.0 319 65.2
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 9.6e-128 461.1 319 67.1
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 9.6e-128 461.1 288 72.2
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.1e-126 457.6 306 67.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 7.6e-125 451.4 304 68.4
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 1.3e-124 450.7 275 72.7
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.2e-119 431.8 293 68.6
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 4.0e-118 429.1 310 61.9
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 9.0e-118 427.9 288 67.4
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 2.6e-117 426.4 312 61.5
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 2.6e-117 426.4 323 60.4
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 4.5e-117 425.6 305 63.0
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 3.5e-114 416.0 306 60.5
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 1.5e-112 410.6 313 62.0
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 4.5e-109 399.1 308 57.5
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.9e-107 393.7 322 59.6
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.9e-107 393.7 322 59.6
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 1.0e-105 387.9 306 56.5
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.8e-103 379.8 216 78.7
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 1.4e-102 377.5 303 61.7
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.2e-98 364.4 272 65.8
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 2.3e-97 360.1 179 92.7
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 6.3e-95 352.1 307 53.4
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 7.7e-93 345.1 225 68.9
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.3e-92 344.4 307 53.4
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 2.8e-71 273.5 307 47.2
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 5.4e-62 242.7 260 47.7
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 2.1e-50 204.1 125 69.6
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 4.9e-47 193.0 123 72.4
Gohir.A12G185600 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.6e-44 182.6 117 70.9
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 8.6e-44 182.2 310 35.8
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 2.9e-39 167.2 337 31.8
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 1.9e-30 137.9 238 35.7
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.6e-29 134.8 349 27.5
Pp3c2_17660 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.6e-26 124.8 99 57.6
HPP92_020253 Vanilla planifolia HOM05D000434 ORTHO05D005992 7.8e-13 79.3 47 74.5
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.9e-11 74.7 74 54.1


User provided reference genes

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