Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0270151 Helianthus annuus HOM05D006409 ORTHO05D008250 1.6e-170 602.8 339 100.0
ECA232G2526 Erigeron canadensis HOM05D006409 ORTHO05D008250 1.0e-116 424.1 340 73.8
HanXRQChr16g0502261 Helianthus annuus HOM05D006409 ORTHO05D008250 1.9e-99 366.7 309 68.3
Lsat_1_v5_gn_4_110201 Lactuca sativa HOM05D006409 ORTHO05D008250 5.1e-76 288.9 338 52.7
TAR629G2567 Trochodendron aralioides HOM05D006409 ORTHO05D008250 1.1e-67 261.2 401 42.6
Ciclev10020474m.g Citrus clementina HOM05D006409 ORTHO05D008250 2.2e-66 256.9 398 44.0
QL10p018676 Quercus lobata HOM05D006409 ORTHO05D008250 2.2e-66 256.9 393 45.0
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 2.8e-66 256.5 381 47.2
Prupe.5G201100 Prunus persica HOM05D006409 ORTHO05D008250 6.3e-66 255.4 406 46.6
MD14G1208800 Malus domestica HOM05D006409 ORTHO05D008250 1.4e-65 254.2 388 44.1
Duzib084G0027 Durio zibethinus HOM05D006409 ORTHO05D008250 1.8e-65 253.8 399 45.4
Sabra15G0078400 Salix brachista HOM05D006409 ORTHO05D008250 1.2e-64 251.1 373 45.0
CiPaw.11G050000 Carya illinoinensis HOM05D006409 ORTHO05D008250 1.5e-64 250.8 379 47.8
FAN18G2755 Fragaria x ananassa HOM05D006409 ORTHO05D008250 1.0e-63 248.1 396 45.7
Nitab4.5_0001961g0070 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.7e-63 247.3 384 42.2
Potri.015G048900 Populus trichocarpa HOM05D006409 ORTHO05D008250 2.2e-63 246.9 397 44.1
FAN13G1588 Fragaria x ananassa HOM05D006409 ORTHO05D008250 3.8e-63 246.1 399 46.4
Rhsim08G0148500 Rhododendron simsii HOM05D006409 ORTHO05D008250 1.9e-62 243.8 380 46.3
Thecc.03G097200 Theobroma cacao HOM05D006409 ORTHO05D008250 5.5e-62 242.3 381 42.3
Oeu014392.1 Olea europaea HOM05D006409 ORTHO05D006262 2.1e-61 240.4 400 41.2
CANSAT80G1113 Cannabis sativa HOM05D006409 ORTHO05D008250 1.8e-60 237.3 390 42.8
DCAR_026015 Daucus carota HOM05D006409 ORTHO05D008250 1.8e-60 237.3 370 44.1
Aqoxy3G03581 Aquilegia oxysepala HOM05D006409 ORTHO05D008250 2.5e-59 233.4 387 41.3
Cc00_g02320 Coffea canephora HOM05D006409 ORTHO05D008250 7.4e-59 231.9 387 44.7
Sopen12g016610 Solanum pennellii HOM05D006409 ORTHO05D008250 2.8e-58 229.9 385 40.8
Nitab4.5_0005160g0050 Nicotiana tabacum HOM05D006409 ORTHO05D008250 1.1e-57 228.0 389 41.1
RcHm_v2.0_Chr7g0182601 Rosa chinensis HOM05D006409 ORTHO05D008250 1.1e-57 228.0 397 43.8
PGR083G0341 Punica granatum HOM05D006409 ORTHO05D008250 6.9e-57 225.3 361 42.1
Actinidia09250 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.6e-56 223.4 354 42.1
Manes.14G084000 Manihot esculenta HOM05D006409 ORTHO05D008250 4.5e-56 222.6 383 42.0
Solyc12g036300.3 Solanum lycopersicum HOM05D006409 ORTHO05D008250 1.1e-54 218.0 382 39.8
Gohir.D12G183500 Gossypium hirsutum HOM05D006409 ORTHO05D008250 4.2e-54 216.1 397 41.3
COL.COLO4_22753 Corchorus olitorius HOM05D006409 ORTHO05D008250 1.6e-53 214.2 396 42.9
GSVIVG01007923001 Vitis vinifera HOM05D006409 ORTHO05D008250 1.6e-53 214.2 405 40.2
MELO3C002015.2 Cucumis melo HOM05D006409 ORTHO05D008250 4.7e-53 212.6 376 42.3
PGSC0003DMG400012806 Solanum tuberosum HOM05D006409 ORTHO05D008250 7.9e-53 211.8 425 36.2
Cfa019299 Carpinus fangiana HOM05D006409 ORTHO05D008250 1.4e-52 211.1 401 42.4
TWI81G1094 Tripterygium wilfordii HOM05D006409 ORTHO05D008250 1.8e-52 210.7 399 42.4
MSTRG.22971 Avicennia marina HOM05D006409 ORTHO05D008250 3.0e-52 209.9 383 38.1
PSO017G5610 Papaver somniferum HOM05D006409 ORTHO05D008250 5.1e-52 209.1 369 43.1
THA.LOC104818336 Tarenaya hassleriana HOM05D006409 ORTHO05D008250 5.1e-52 209.1 402 40.3
Cpa.g.sc94.9 Carica papaya HOM05D006409 ORTHO05D008250 8.8e-52 208.4 386 38.6
Eucgr.B00571 Eucalyptus grandis HOM05D006409 ORTHO05D008250 8.8e-52 208.4 392 41.6
CsaV3_1G005860 Cucumis sativus L. HOM05D006409 ORTHO05D008250 1.1e-51 208.0 377 42.2
CARHR205310 Cardamine hirsuta HOM05D006409 ORTHO05D008250 4.4e-51 206.1 383 37.6
Gorai.008G196800 Gossypium raimondii HOM05D006409 ORTHO05D008250 4.4e-51 206.1 383 41.0
PSO302G0195 Papaver somniferum HOM05D006409 ORTHO05D008250 4.4e-51 206.1 368 39.9
AL6G18220 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 9.7e-51 204.9 384 40.6
FvH4_5g14277 Fragaria vesca HOM05D006409 ORTHO05D008250 9.7e-51 204.9 343 44.3
Sp6g35060 Schrenkiella parvula HOM05D006409 ORTHO05D008250 2.2e-50 203.8 385 39.0
Carub.0008s2186 Capsella rubella HOM05D006409 ORTHO05D008250 2.8e-50 203.4 386 37.8
PSO478G4763 Papaver somniferum HOM05D006409 ORTHO05D008250 2.8e-50 203.4 369 42.0
Peaxi162Scf00106g00081 Petunia axillaris HOM05D006409 ORTHO05D008250 1.1e-49 201.4 385 38.2
CAN.G172.10 Capsicum annuum HOM05D006409 ORTHO05D008250 1.2e-48 198.0 342 40.1
Carub.0006s0678 Capsella rubella HOM05D006409 ORTHO05D008250 1.5e-48 197.6 367 40.6
Gohir.A12G180800 Gossypium hirsutum HOM05D006409 ORTHO05D008250 1.5e-48 197.6 397 40.1
Actinidia04843 Actinidia chinensis HOM05D006409 ORTHO05D008250 2.0e-48 197.2 241 49.8
AL8G37860 Arabidopsis lyrata HOM05D006409 ORTHO05D008250 4.5e-48 196.1 390 40.8
AT5G07890 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 4.5e-48 196.1 384 38.3
FAN08G0388 Fragaria x ananassa HOM05D006409 ORTHO05D008250 5.9e-48 195.7 393 42.0
Lj4g0024886 Lotus japonicus HOM05D006409 ORTHO05D008250 5.9e-48 195.7 384 37.5
VMungo1215G3198 Vigna mungo HOM05D006409 ORTHO05D008250 5.9e-48 195.7 358 38.5
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 1.3e-47 194.5 377 37.1
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 3.8e-47 193.0 390 37.4
Glyma.17G076800 Glycine max HOM05D006409 ORTHO05D008250 8.5e-47 191.8 386 36.5
BolC9t59643H Brassica oleracea HOM05D006409 ORTHO05D008250 1.1e-46 191.4 387 37.2
CANSAT80G0413 Cannabis sativa HOM05D006409 ORTHO05D008250 1.1e-46 191.4 359 41.5
Glyma.05G022800 Glycine max HOM05D006409 ORTHO05D008250 2.5e-46 190.3 386 37.0
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 5.5e-46 189.1 386 37.8
Phvul.L001604 Phaseolus vulgaris HOM05D006409 ORTHO05D008250 5.5e-46 189.1 383 36.0
vmacro17591 Vaccinium macrocarpon HOM05D006409 ORTHO05D008250 7.2e-46 188.7 380 38.2
ClCG04G011930 Citrullus lanatus HOM05D006409 ORTHO05D008250 1.2e-45 188.0 382 39.8
C03p03950 Brassica napus HOM05D006409 ORTHO05D008250 3.6e-45 186.4 387 36.2
BolC3t12932H Brassica oleracea HOM05D006409 ORTHO05D008250 3.6e-45 186.4 387 36.2
Migut.I00315 Erythranthe guttata HOM05D006409 ORTHO05D008250 4.7e-45 186.0 376 37.5
Thhalv10013673m.g Eutrema salsugineum HOM05D006409 ORTHO05D008250 8.0e-45 185.3 388 39.7
A03p03510 Brassica napus HOM05D006409 ORTHO05D008250 1.0e-44 184.9 395 38.0
AT5G61200 Arabidopsis thaliana HOM05D006409 ORTHO05D008250 1.8e-44 184.1 380 39.7
arahy.Tifrunner.gnm1.ann1.4D2E4C Arachis hypogaea HOM05D006409 ORTHO05D008250 2.3e-44 183.7 385 37.4
BcaNung06903 Brassica carinata HOM05D006409 ORTHO05D008250 3.0e-44 183.3 383 37.9
Haze_07680 Corylus avellana HOM05D006409 ORTHO05D008250 3.0e-44 183.3 320 42.8
BraA03t09701Z Brassica rapa HOM05D006409 ORTHO05D008250 5.2e-44 182.6 396 37.9
Lj5A105T60 Lonicera japonica HOM05D006409 ORTHO05D008250 8.8e-44 181.8 243 46.5
arahy.Tifrunner.gnm1.ann1.PS4SMH Arachis hypogaea HOM05D006409 ORTHO05D008250 2.0e-43 180.6 381 36.7
BcaB01g05645 Brassica carinata HOM05D006409 ORTHO05D008250 2.0e-43 180.6 380 36.3
Medtr4g109330 Medicago truncatula HOM05D006409 ORTHO05D008250 2.2e-42 177.2 317 38.5
TPR.G2042 Trifolium pratense HOM05D006409 ORTHO05D008250 3.7e-42 176.4 387 36.4
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 4.8e-42 176.0 379 36.1
EL10Ac5g11100 Beta vulgaris HOM05D006409 ORTHO05D008250 1.8e-41 174.1 341 40.2
Psat4g048440 Pisum sativum HOM05D006409 ORTHO05D008250 2.4e-41 173.7 316 38.6
ATR0064G033 Amborella trichopoda HOM05D006409 ORTHO05D008250 5.3e-41 172.6 402 35.3
Nn4g23374 Nelumbo nucifera HOM05D006409 ORTHO05D008250 7.0e-41 172.2 396 35.1
Lalb_Chr13g0302951 Lupinus albus HOM05D006409 ORTHO05D008250 1.2e-40 171.4 370 36.8
Sc04g0003080 Simmondsia chinensis HOM05D006409 ORTHO05D008250 2.0e-40 170.6 359 39.6
Ah.02g113920 Amaranthus hybridus HOM05D006409 ORTHO05D008250 5.9e-40 169.1 328 37.2
Atru.chr9.377 Acer truncatum HOM05D006409 ORTHO05D008250 3.8e-39 166.4 312 41.3
Os07g0598700 Oryza sativa ssp. japonica HOM05D006409 ORTHO05D008250 5.0e-39 166.0 356 36.8
Zm00001eb108440 Zea mays HOM05D006409 ORTHO05D008250 9.4e-38 161.8 331 36.9
Sed0008489 Sechium edule HOM05D006409 ORTHO05D008250 5.7e-35 152.5 389 37.3
CDE06G0998 Ceratophyllum demersum HOM05D006409 ORTHO05D008250 2.2e-34 150.6 337 32.9
Hund02605 Selenicereus undatus HOM05D006409 ORTHO05D008250 1.2e-32 144.8 371 36.9
Ca_21789_v3 Cicer arietinum L. HOM05D006409 ORTHO05D008250 2.9e-31 140.2 212 41.5
SalBow5G3762 Salvia bowleyana HOM05D006409 ORTHO05D008250 2.5e-30 137.1 373 32.4
AUR62021594 Chenopodium quinoa HOM05D006409 ORTHO05D008250 4.2e-30 136.3 343 34.4
Duzib068G0538 Durio zibethinus HOM05D006409 ORTHO05D008250 3.0e-28 130.2 212 42.0
AUR62008498 Chenopodium quinoa HOM05D006409 ORTHO05D008250 6.8e-28 129.0 398 29.4
C04p51620 Brassica napus HOM05D006409 ORTHO05D008250 8.3e-26 122.1 265 37.4
BcaC02g08700 Brassica carinata HOM05D006409 ORTHO05D008250 9.5e-22 108.6 292 32.5
BcaC02g08698 Brassica carinata HOM05D006409 ORTHO05D008250 2.0e-16 90.9 277 33.9
SEGI_28191 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 8.6e-15 85.5 395 27.1
SEGI_37085 Sequoiadendron giganteum HOM05D006409 ORTHO05D008250 8.6e-15 85.5 395 27.1
Actinidia12838 Actinidia chinensis HOM05D006409 ORTHO05D008250 7.3e-14 82.4 81 56.8
SGA_v2.0_scaffold25G10967 Striga asiatica HOM05D006409 ORTHO05D008250 9.5e-14 82.0 322 28.9
arahy.Tifrunner.gnm1.ann1.LPT8KM Arachis hypogaea HOM05D006409 ORTHO05D008250 5.2e-12 76.3 70 58.6
BcaC02g08699 Brassica carinata HOM05D006409 ORTHO05D008250 2.9e-10 70.5 136 33.1
C04p51600 Brassica napus HOM05D006409 ORTHO05D008250 4.1e-09 66.6 77 50.6
C04p51590 Brassica napus HOM05D006409 ORTHO05D008250 7.0e-09 65.9 90 38.9


User provided reference genes

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