Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0269891 Helianthus annuus HOM05D007696 ORTHO05D009719 1.6e-104 382.9 204 100.0
Lsat_1_v5_gn_4_115821 Lactuca sativa HOM05D007696 ORTHO05D009719 1.6e-64 250.0 220 64.1
ECA232G0656 Erigeron canadensis HOM05D007696 ORTHO05D009719 1.9e-62 243.0 220 62.7
Lj9A429T50 Lonicera japonica HOM05D007696 ORTHO05D009719 1.8e-44 183.3 220 48.2
QL10p022430 Quercus lobata HOM05D007696 ORTHO05D009719 1.5e-43 180.3 219 47.5
Actinidia39813 Actinidia chinensis HOM05D007696 ORTHO05D009719 1.0e-42 177.6 219 47.5
FvH4_5g12640 Fragaria vesca HOM05D007696 ORTHO05D009719 2.7e-40 169.5 212 48.1
FAN08G1182 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.7e-40 169.5 211 48.3
Manes.01G020300 Manihot esculenta HOM05D007696 ORTHO05D009719 3.6e-40 169.1 220 45.5
FAN18G3725 Fragaria x ananassa HOM05D007696 ORTHO05D009719 4.6e-40 168.7 210 48.1
FAN13G0134 Fragaria x ananassa HOM05D007696 ORTHO05D009719 1.3e-39 167.2 211 46.9
RcHm_v2.0_Chr7g0184691 Rosa chinensis HOM05D007696 ORTHO05D009719 3.0e-39 166.0 220 45.9
Aqoxy3G03910 Aquilegia oxysepala HOM05D007696 ORTHO05D009719 1.1e-38 164.1 218 46.3
GSVIVG01008244001 Vitis vinifera HOM05D007696 ORTHO05D009719 4.3e-38 162.2 220 44.5
Cc04_g07460 Coffea canephora HOM05D007696 ORTHO05D009719 7.4e-38 161.4 220 43.6
Potri.015G049800 Populus trichocarpa HOM05D007696 ORTHO05D009719 3.7e-37 159.1 219 43.4
CANSAT54G2838 Cannabis sativa HOM05D007696 ORTHO05D009719 4.1e-36 155.6 217 45.6
CANSAT54G0455 Cannabis sativa HOM05D007696 ORTHO05D009719 6.9e-36 154.8 217 44.7
Sc04g0003700 Simmondsia chinensis HOM05D007696 ORTHO05D009719 2.0e-35 153.3 202 46.0
CiPaw.15G127500 Carya illinoinensis HOM05D007696 ORTHO05D009719 3.4e-35 152.5 219 42.5
EL10Ac5g11256 Beta vulgaris HOM05D007696 ORTHO05D009719 4.5e-35 152.1 204 45.6
Atru.chr9.778 Acer truncatum HOM05D007696 ORTHO05D009719 1.0e-34 151.0 207 46.4
Dinv07368 Davidia involucrata HOM05D007696 ORTHO05D009719 2.2e-34 149.8 209 46.9
FAN04G2461 Fragaria x ananassa HOM05D007696 ORTHO05D009719 2.2e-34 149.8 224 43.8
Prupe.5G218000 Prunus persica HOM05D007696 ORTHO05D009719 3.2e-33 146.0 220 41.8
TWI81G0276 Tripterygium wilfordii HOM05D007696 ORTHO05D009719 3.2e-33 146.0 211 45.5
Hund10004 Selenicereus undatus HOM05D007696 ORTHO05D009719 9.4e-33 144.4 202 44.1
Lalb_Chr19g0140261 Lupinus albus HOM05D007696 ORTHO05D009719 6.1e-32 141.7 219 39.7
Thecc.03G029300 Theobroma cacao HOM05D007696 ORTHO05D009719 1.4e-31 140.6 193 44.6
AUR62036960 Chenopodium quinoa HOM05D007696 ORTHO05D009719 3.0e-31 139.4 205 42.9
AUR62032195 Chenopodium quinoa HOM05D007696 ORTHO05D009719 6.7e-31 138.3 209 42.1
Duzib068G0054 Durio zibethinus HOM05D007696 ORTHO05D009719 8.8e-31 137.9 196 43.4
Gohir.D08G105400 Gossypium hirsutum HOM05D007696 ORTHO05D009719 8.8e-31 137.9 188 45.7
Gorai.004G112300 Gossypium raimondii HOM05D007696 ORTHO05D009719 8.8e-31 137.9 188 45.7
Ciclev10022427m.g Citrus clementina HOM05D007696 ORTHO05D009719 4.3e-30 135.6 174 48.3
Gohir.A08G094200 Gossypium hirsutum HOM05D007696 ORTHO05D009719 4.3e-30 135.6 189 42.9
COL.COLO4_16235 Corchorus olitorius HOM05D007696 ORTHO05D009719 1.3e-29 134.0 198 41.9
TAR622G0575 Trochodendron aralioides HOM05D007696 ORTHO05D009719 1.3e-29 134.0 188 44.7
MD14G1222400 Malus domestica HOM05D007696 ORTHO05D009719 3.7e-29 132.5 220 38.6
MBI13_g27794_MAGBIO Magnolia biondii HOM05D007696 ORTHO05D009719 1.4e-28 130.6 182 47.3
vmacro17668 Vaccinium macrocarpon HOM05D007696 ORTHO05D009719 1.8e-28 130.2 220 37.7
Cfa019805 Carpinus fangiana HOM05D007696 ORTHO05D009719 2.0e-27 126.7 212 38.2
Oeu055893.1 Olea europaea HOM05D007696 ORTHO05D009719 2.2e-26 123.2 177 46.3
Phvul.011G012300 Phaseolus vulgaris HOM05D007696 ORTHO05D009719 2.2e-26 123.2 221 36.7
CSS0029722 Camellia sinensis var. sinensis HOM05D007696 ORTHO05D009719 6.5e-26 121.7 118 57.6
Lj3g0018148 Lotus japonicus HOM05D007696 ORTHO05D009719 8.5e-26 121.3 221 37.6
THA.LOC104821847 Tarenaya hassleriana HOM05D007696 ORTHO05D009719 3.2e-25 119.4 178 39.9
arahy.Tifrunner.gnm1.ann1.ISQN6X Arachis hypogaea HOM05D007696 ORTHO05D009719 5.5e-25 118.6 221 38.0
Nn4g23733 Nelumbo nucifera HOM05D007696 ORTHO05D009719 5.5e-25 118.6 221 37.6
PSO063G6876 Papaver somniferum HOM05D007696 ORTHO05D009719 5.5e-25 118.6 217 37.3
FAN18G2008 Fragaria x ananassa HOM05D007696 ORTHO05D009719 6.1e-24 115.2 238 35.7
Sp7g03680 Schrenkiella parvula HOM05D007696 ORTHO05D009719 6.1e-24 115.2 183 38.8
BcaB01g01733 Brassica carinata HOM05D007696 ORTHO05D009719 7.9e-24 114.8 163 43.6
VMungo1127G1702 Vigna mungo HOM05D007696 ORTHO05D009719 2.3e-23 113.2 207 36.7
Eucgr.K02660 Eucalyptus grandis HOM05D007696 ORTHO05D009719 3.9e-23 112.5 178 39.9
DCAR_011551 Daucus carota HOM05D007696 ORTHO05D009719 6.7e-23 111.7 121 52.1
Thhalv10027967m.g Eutrema salsugineum HOM05D007696 ORTHO05D009719 8.8e-23 111.3 164 43.3
TPR.G30177 Trifolium pratense HOM05D007696 ORTHO05D009719 2.2e-21 106.7 211 36.0
Hma1.2p1_0340F.1_g129830 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 3.7e-21 105.9 73 72.6
Hma1.2p1_0340F.1_g129843 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 3.7e-21 105.9 73 72.6
Cpa.g.sc13.41 Carica papaya HOM05D007696 ORTHO05D009719 1.1e-20 104.4 123 48.8
Lsat_1_v5_gn_9_67701 Lactuca sativa HOM05D007696 ORTHO05D009719 4.1e-20 102.4 58 91.4
CAN.G438.120 Capsicum annuum HOM05D007696 ORTHO05D009719 7.7e-19 98.2 170 40.6
arahy.Tifrunner.gnm1.ann1.2ZW1BF Arachis hypogaea HOM05D007696 ORTHO05D009719 1.3e-18 97.4 256 32.4
Glyma.09G227800 Glycine max HOM05D007696 ORTHO05D009719 1.3e-18 97.4 188 37.2
Zm00001eb347780 Zea mays HOM05D007696 ORTHO05D009719 3.8e-18 95.9 201 37.3
Os05g0275600 Oryza sativa ssp. japonica HOM05D007696 ORTHO05D009719 1.1e-17 94.4 209 37.8
AL2G14870 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 7.2e-17 91.7 175 34.9
AT1G61415 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 3.6e-16 89.4 175 34.9
Haze_18634 Corylus avellana HOM05D007696 ORTHO05D009719 3.6e-16 89.4 70 67.1
AL2G14920 Arabidopsis lyrata HOM05D007696 ORTHO05D009719 5.2e-15 85.5 180 32.8
Rhsim08G0136100 Rhododendron simsii HOM05D007696 ORTHO05D009719 8.8e-15 84.7 268 29.5
BcaC04g21230 Brassica carinata HOM05D007696 ORTHO05D009719 1.5e-14 84.0 165 37.0
C09p34110 Brassica napus HOM05D007696 ORTHO05D009719 1.5e-14 84.0 165 37.0
BolC9t56248H Brassica oleracea HOM05D007696 ORTHO05D009719 1.5e-14 84.0 165 37.0
Hma1.2p1_0340F.1_g129840 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.0e-14 83.6 97 48.5
Hma1.2p1_0340F.1_g129846 Hydrangea macrophylla HOM05D007696 ORTHO05D009719 2.0e-14 83.6 97 48.5
Psat7g166400 Pisum sativum HOM05D007696 ORTHO05D009719 2.6e-14 83.2 188 33.5
CDE02G2124 Ceratophyllum demersum HOM05D007696 ORTHO05D009719 3.3e-14 82.8 116 43.1
Carub.0002s0377 Capsella rubella HOM05D007696 ORTHO05D009719 2.8e-13 79.7 165 35.2
A09p26940 Brassica napus HOM05D007696 ORTHO05D009719 4.8e-13 79.0 178 32.0
BraA09t38264Z Brassica rapa HOM05D007696 ORTHO05D009719 4.8e-13 79.0 178 32.0
CARHR051130 Cardamine hirsuta HOM05D007696 ORTHO05D009719 6.3e-13 78.6 173 34.7
Medtr0085s0020 Medicago truncatula HOM05D007696 ORTHO05D009719 2.0e-11 73.6 142 34.5
VMungo0251G1113 Vigna mungo HOM05D007696 ORTHO05D009719 5.5e-09 65.5 71 47.9
AT1G61450 Arabidopsis thaliana HOM05D007696 ORTHO05D009719 9.4e-09 64.7 121 33.9
ATR0317G063 Amborella trichopoda HOM05D007696 ORTHO05D009719 3.4e-06 56.2 80 41.2


User provided reference genes

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