Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 0.0e+00 1278.1 633 100.0
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 0.0e+00 1139.8 634 89.0
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 3.4e-307 1057.7 634 83.3
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 5.8e-283 977.2 648 74.4
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 1.7e-282 975.7 653 73.7
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 2.9e-282 974.9 648 74.2
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 8.4e-282 973.4 650 73.8
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 5.4e-281 970.7 646 74.8
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 2.1e-280 968.8 650 73.5
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 3.0e-279 964.9 651 74.2
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.9e-279 964.5 650 73.5
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 8.7e-279 963.4 636 75.0
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 8.7e-279 963.4 643 75.0
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 3.3e-278 961.4 643 72.9
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 7.4e-278 960.3 642 72.9
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.7e-277 958.0 664 71.8
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 3.7e-277 958.0 651 73.6
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.1e-276 956.4 640 74.5
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.1e-276 956.4 659 71.9
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 1.8e-276 955.7 636 75.2
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 1.5e-275 952.6 643 74.0
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 1.5e-275 952.6 651 73.3
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 2.0e-275 952.2 651 73.1
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.6e-275 951.8 651 73.0
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 7.6e-275 950.3 649 71.6
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 3.8e-274 948.0 651 73.1
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 6.5e-274 947.2 661 71.7
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 1.4e-273 946.0 649 71.3
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 2.5e-273 945.3 600 78.0
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 3.2e-273 944.9 652 74.7
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 1.2e-272 943.0 649 71.5
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 2.7e-272 941.8 667 71.1
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 3.5e-272 941.4 651 73.0
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 3.5e-272 941.4 649 72.7
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 6.0e-272 940.6 651 71.9
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 7.9e-272 940.3 652 71.3
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 1.0e-271 939.9 649 72.9
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 5.1e-271 937.6 649 72.9
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 5.1e-271 937.6 648 73.0
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 9.6e-270 933.3 635 74.2
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 2.8e-269 931.8 643 71.4
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.8e-269 931.8 652 73.0
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 8.2e-269 930.2 652 72.7
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 1.1e-268 929.9 648 70.5
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.3e-268 927.5 651 71.1
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 2.9e-266 921.8 638 72.3
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 6.5e-266 920.6 599 75.8
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 6.5e-266 920.6 648 69.8
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.1e-265 919.8 635 71.8
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 3.2e-265 918.3 647 71.7
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 4.2e-265 917.9 597 76.0
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 1.6e-264 916.0 609 73.9
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 1.6e-264 916.0 636 70.6
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 3.5e-264 914.8 633 72.2
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 3.5e-264 914.8 635 72.0
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 4.6e-264 914.4 638 71.9
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 6.1e-264 914.1 634 70.5
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 1.8e-263 912.5 634 71.0
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 3.0e-263 911.8 649 70.6
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 8.7e-263 910.2 647 70.8
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 8.7e-263 910.2 602 74.3
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 1.9e-262 909.1 634 71.5
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 2.5e-262 908.7 600 74.8
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 2.5e-262 908.7 633 72.2
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 5.7e-262 907.5 652 69.5
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 1.6e-261 906.0 647 71.1
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 6.3e-261 904.0 651 68.8
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.4e-260 902.9 650 69.8
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 2.4e-260 902.1 638 70.7
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 4.1e-260 901.4 634 70.7
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 6.9e-260 900.6 649 68.9
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 1.3e-258 896.3 639 70.4
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 1.9e-257 892.5 603 71.8
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 2.5e-257 892.1 634 69.2
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 1.2e-256 889.8 590 74.1
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 1.8e-255 885.9 601 73.5
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 2.5e-254 882.1 646 68.3
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 1.7e-253 879.4 639 68.9
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 2.8e-253 878.6 603 72.0
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 6.3e-253 877.5 639 68.9
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 6.3e-253 877.5 639 68.7
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 6.9e-252 874.0 640 68.6
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 9.1e-252 873.6 603 71.5
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 2.0e-251 872.5 638 67.9
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 5.9e-251 870.9 639 68.4
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 8.5e-250 867.1 640 68.1
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 1.9e-249 865.9 611 70.2
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 7.2e-249 864.0 649 67.2
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 4.7e-248 861.3 655 67.5
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 6.1e-248 860.9 636 68.1
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.2e-245 852.4 637 67.7
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 5.0e-242 841.3 517 79.9
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 2.5e-233 812.4 714 59.4
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 6.5e-226 787.7 623 65.2
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 1.2e-224 783.5 645 62.2
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 4.1e-220 768.5 642 62.5
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 7.7e-219 764.2 517 72.5
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 1.7e-218 763.1 650 63.5
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 5.7e-214 748.0 734 54.2
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 1.7e-205 719.9 601 60.6
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 8.3e-205 717.6 735 49.4
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 3.2e-204 715.7 748 49.9
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 1.2e-198 697.2 812 47.7
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 1.5e-198 696.8 635 58.6
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 8.3e-197 691.0 846 44.8
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 3.0e-194 682.6 444 76.4
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 5.8e-190 668.3 453 72.4
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.1e-185 654.1 641 52.6
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.7e-170 603.6 423 70.2
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 4.9e-165 585.5 527 59.0
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 3.0e-154 549.7 550 51.6
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 2.4e-143 513.5 411 64.2
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 1.2e-118 431.4 305 67.2
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.2e-117 427.2 383 59.5
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 6.1e-107 392.5 262 74.0
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 3.4e-105 386.7 354 55.1
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 1.6e-91 341.3 215 76.3
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 1.4e-90 338.2 236 70.3
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 8.6e-85 318.9 337 51.9
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 1.4e-82 311.6 544 39.0
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 2.3e-61 241.1 155 72.3
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 3.2e-39 167.5 434 30.0
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.8e-34 151.8 121 61.2
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 2.0e-33 148.3 139 54.0
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 4.1e-10 70.9 155 32.9
Nn1g03516 Nelumbo nucifera HOM05D005975 ORTHO05D007373 5.0e-08 63.9 49 63.3
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 3.2e-07 61.2 47 68.1
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 7.2e-07 60.1 48 62.5


User provided reference genes

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