Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0268441 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1656.3 835 100.0
Lsat_1_v5_gn_4_119740 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1431.8 843 86.5
ECA232G0159 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1424.5 816 88.2
Lsat_1_v5_gn_1_18561 Lactuca sativa HOM05D003945 ORTHO05D004625 0.0e+00 1390.2 841 84.3
HanXRQChr00c0117g0571731 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1385.2 828 84.7
HanXRQChr04g0104741 Helianthus annuus HOM05D003945 ORTHO05D004625 0.0e+00 1358.2 843 81.1
ECA247G1056 Erigeron canadensis HOM05D003945 ORTHO05D004625 0.0e+00 1335.9 823 82.7
Lj4A44G44 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1293.9 809 80.1
Ciclev10000250m.g Citrus clementina HOM05D003945 ORTHO05D004625 0.0e+00 1287.7 834 78.3
GSVIVG01009647001 Vitis vinifera HOM05D003945 ORTHO05D004625 0.0e+00 1286.6 834 77.9
CsaV3_2G028440 Cucumis sativus L. HOM05D003945 ORTHO05D004625 0.0e+00 1278.8 833 77.3
Thecc.08G022100 Theobroma cacao HOM05D003945 ORTHO05D004625 0.0e+00 1278.1 817 79.3
Duzib093G0983 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1274.2 817 79.2
Potri.002G133300 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1273.1 816 78.8
Phvul.009G055900 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1270.4 816 79.2
Cfa018443 Carpinus fangiana HOM05D003945 ORTHO05D004625 0.0e+00 1270.0 813 79.2
Duzib116G0373 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1270.0 816 78.8
Cpa.g.sc64.47 Carica papaya HOM05D003945 ORTHO05D004625 0.0e+00 1268.1 813 78.2
Lj5g0000532 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1267.3 815 78.5
Glyma.06G034400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1265.8 816 79.3
Gohir.D06G009400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1264.2 816 78.6
Gorai.010G012200 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1264.2 816 78.6
Sed0018308 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1263.8 834 76.6
Gohir.A06G012000 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1263.4 816 78.6
TPR.G12378 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1263.1 817 78.5
Duzib041G0798 Durio zibethinus HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 817 78.2
Potri.014G040800 Populus trichocarpa HOM05D003945 ORTHO05D004625 0.0e+00 1262.7 816 78.4
CANSAT25G0653 Cannabis sativa HOM05D003945 ORTHO05D004625 0.0e+00 1262.3 817 77.7
RcHm_v2.0_Chr6g0300451 Rosa chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1261.1 817 78.0
Haze_17624 Corylus avellana HOM05D003945 ORTHO05D004625 0.0e+00 1260.7 781 81.3
Dinv39382 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1260.4 865 75.0
Sed0019202 Sechium edule HOM05D003945 ORTHO05D004625 0.0e+00 1260.4 834 77.1
Actinidia22566 Actinidia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1259.6 844 76.2
arahy.Tifrunner.gnm1.ann1.6F7CQG Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1259.6 816 78.6
FvH4_2g40290 Fragaria vesca HOM05D003945 ORTHO05D004625 0.0e+00 1259.6 817 78.0
Glyma.04G034200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1259.6 815 79.1
QL02p007358 Quercus lobata HOM05D003945 ORTHO05D004625 0.0e+00 1259.2 813 77.9
FAN27G0143 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1258.8 817 77.7
MSTRG.24306 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 830 78.0
CiPaw.15G072600 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 813 77.7
Medtr3g111630 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1256.5 815 78.4
Manes.05G163500 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1256.1 815 79.3
PGSC0003DMG400016879 Solanum tuberosum HOM05D003945 ORTHO05D004625 0.0e+00 1256.1 812 77.7
Gorai.009G205100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1255.7 817 77.7
Sopen04g033470 Solanum pennellii HOM05D003945 ORTHO05D004625 0.0e+00 1255.7 816 78.7
Glyma.14G077200 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1255.4 814 76.9
Psat5g018920 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1255.4 833 76.0
Solyc04g079900.3 Solanum lycopersicum HOM05D003945 ORTHO05D004625 0.0e+00 1255.4 816 78.7
Gohir.D05G199800 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1255.0 817 77.7
Cc10_g03360 Coffea canephora HOM05D003945 ORTHO05D004625 0.0e+00 1254.6 817 77.1
CAN.G371.130 Capsicum annuum HOM05D003945 ORTHO05D004625 0.0e+00 1253.8 812 78.7
FAN20G0651 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1253.0 817 77.4
Prupe.1G383600 Prunus persica HOM05D003945 ORTHO05D004625 0.0e+00 1253.0 816 77.7
VMungo0647G1838 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1252.7 813 76.9
FAN15G1095 Fragaria x ananassa HOM05D003945 ORTHO05D004625 0.0e+00 1252.3 828 77.1
Lalb_Chr24g0399061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1250.3 814 77.3
CSS0008782 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 0.0e+00 1250.0 830 76.9
Lalb_Chr14g0369061 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1249.2 815 78.4
Lj1g0024333 Lotus japonicus HOM05D003945 ORTHO05D004625 0.0e+00 1248.8 815 78.5
PGR031G2694 Punica granatum HOM05D003945 ORTHO05D004625 0.0e+00 1246.5 808 77.7
Sabra02G0104100 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1246.5 812 78.7
Nn5g29493 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1243.4 840 75.4
CiPaw.16G054000 Carya illinoinensis HOM05D003945 ORTHO05D004625 0.0e+00 1243.0 809 77.8
Gorai.009G274100 Gossypium raimondii HOM05D003945 ORTHO05D004625 0.0e+00 1243.0 818 76.9
TWI56G0898 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1241.1 786 79.9
Gohir.D05G262200 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1239.9 818 76.8
Gohir.A05G260400 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1238.0 818 78.2
Aqoxy6G01012 Aquilegia oxysepala HOM05D003945 ORTHO05D004625 0.0e+00 1236.9 814 77.1
Psat6g032680 Pisum sativum HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 815 77.9
VMungo1309G1712 Vigna mungo HOM05D003945 ORTHO05D004625 0.0e+00 1236.5 815 76.9
Lalb_Chr22g0355401 Lupinus albus HOM05D003945 ORTHO05D004625 0.0e+00 1235.7 816 76.2
Nitab4.5_0003588g0030 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1235.3 821 78.0
TAR381G0557 Trochodendron aralioides HOM05D003945 ORTHO05D004625 0.0e+00 1235.3 816 77.1
MD08G1036300 Malus domestica HOM05D003945 ORTHO05D004625 0.0e+00 1234.6 798 77.4
arahy.Tifrunner.gnm1.ann1.SKM2GN Arachis hypogaea HOM05D003945 ORTHO05D004625 0.0e+00 1233.4 851 70.2
TWI12G1285 Tripterygium wilfordii HOM05D003945 ORTHO05D004625 0.0e+00 1232.2 782 81.3
DCAR_012756 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1231.9 810 76.8
THA.LOC104809128 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1231.9 819 76.4
SalBow8G1011 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1230.7 818 77.0
THA.LOC104806880 Tarenaya hassleriana HOM05D003945 ORTHO05D004625 0.0e+00 1229.9 817 76.6
AUR62033857 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1229.5 816 76.5
Peaxi162Scf00057g01112 Petunia axillaris HOM05D003945 ORTHO05D004625 0.0e+00 1229.2 836 76.8
Sabra14G0029800 Salix brachista HOM05D003945 ORTHO05D004625 0.0e+00 1228.4 866 73.8
Manes.18G029900 Manihot esculenta HOM05D003945 ORTHO05D004625 0.0e+00 1227.2 819 76.3
MBI16_g13147_MAGBIO Magnolia biondii HOM05D003945 ORTHO05D004625 0.0e+00 1223.8 814 75.8
Nitab4.5_0000110g0200 Nicotiana tabacum HOM05D003945 ORTHO05D004625 0.0e+00 1223.8 809 77.4
Eucgr.A00488 Eucalyptus grandis HOM05D003945 ORTHO05D004625 0.0e+00 1223.4 813 77.2
Nn1g05109 Nelumbo nucifera HOM05D003945 ORTHO05D004625 0.0e+00 1219.1 814 77.0
PSO541G5148 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1217.6 833 75.0
PSO675G7084 Papaver somniferum HOM05D003945 ORTHO05D004625 0.0e+00 1217.6 833 74.8
MSTRG.1299 Avicennia marina HOM05D003945 ORTHO05D004625 0.0e+00 1217.2 829 74.7
vmacro21611 Vaccinium macrocarpon HOM05D003945 ORTHO05D004625 0.0e+00 1216.1 832 77.0
DCAR_019505 Daucus carota HOM05D003945 ORTHO05D004625 0.0e+00 1215.7 810 76.0
EL10Ac1g01765 Beta vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1209.5 812 75.2
AUR62041666 Chenopodium quinoa HOM05D003945 ORTHO05D004625 0.0e+00 1209.1 843 73.4
Oeu009604.1 Olea europaea HOM05D003945 ORTHO05D004625 0.0e+00 1206.4 853 72.9
Ah.11g043210 Amaranthus hybridus HOM05D003945 ORTHO05D004625 0.0e+00 1199.9 816 74.6
ATR0733G077 Amborella trichopoda HOM05D003945 ORTHO05D004625 0.0e+00 1199.9 834 73.4
AL8G18650 Arabidopsis lyrata HOM05D003945 ORTHO05D004625 0.0e+00 1199.9 816 75.4
AT5G42620 Arabidopsis thaliana HOM05D003945 ORTHO05D004625 0.0e+00 1197.6 812 75.5
BcaC02g10772 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1196.8 813 75.4
C04p25260 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1196.8 813 75.4
BolC4t24032H Brassica oleracea HOM05D003945 ORTHO05D004625 0.0e+00 1196.8 813 75.4
CARHR181510 Cardamine hirsuta HOM05D003945 ORTHO05D004625 0.0e+00 1195.3 821 74.9
MELO3C010920.2 Cucumis melo HOM05D003945 ORTHO05D004625 0.0e+00 1195.3 876 69.3
Dinv36042 Davidia involucrata HOM05D003945 ORTHO05D004625 0.0e+00 1193.7 774 79.3
Carub.0008s0641 Capsella rubella HOM05D003945 ORTHO05D004625 0.0e+00 1192.2 788 75.8
Thhalv10022547m.g Eutrema salsugineum HOM05D003945 ORTHO05D004625 0.0e+00 1191.8 831 73.2
SGA_v2.0_scaffold48G18049 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1191.8 853 69.3
Sp2g07000 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1187.2 830 74.1
SpUn0022_0010 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1187.2 830 74.1
SpUn0026_0070 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1187.2 830 74.1
SpUn0029_0030 Schrenkiella parvula HOM05D003945 ORTHO05D004625 0.0e+00 1187.2 830 74.1
Lj4C783T17 Lonicera japonica HOM05D003945 ORTHO05D004625 0.0e+00 1183.7 870 70.9
BcaC06g31752 Brassica carinata HOM05D003945 ORTHO05D004625 0.0e+00 1183.3 812 75.1
A06p48280 Brassica napus HOM05D003945 ORTHO05D004625 0.0e+00 1182.2 783 76.9
BraA06t27697Z Brassica rapa HOM05D003945 ORTHO05D004625 0.0e+00 1182.2 783 76.9
CDE07G1908 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1181.8 805 74.7
Aa31LG9G12670 Aethionema arabicum HOM05D003945 ORTHO05D004625 0.0e+00 1176.8 830 71.7
CDE04G0514 Ceratophyllum demersum HOM05D003945 ORTHO05D004625 0.0e+00 1176.4 803 74.6
Zm00001eb056220 Zea mays HOM05D003945 ORTHO05D004625 0.0e+00 1175.6 818 73.6
Os03g0731500 Oryza sativa ssp. japonica HOM05D003945 ORTHO05D004625 0.0e+00 1175.2 818 73.5
Glyma.17G248400 Glycine max HOM05D003945 ORTHO05D004625 0.0e+00 1172.9 754 78.5
Gohir.A05G196700 Gossypium hirsutum HOM05D003945 ORTHO05D004625 0.0e+00 1166.4 817 73.1
Hund17646 Selenicereus undatus HOM05D003945 ORTHO05D004625 0.0e+00 1159.8 804 72.9
Medtr1g021950 Medicago truncatula HOM05D003945 ORTHO05D004625 0.0e+00 1158.7 810 72.8
Atru.chr13.549 Acer truncatum HOM05D003945 ORTHO05D004625 0.0e+00 1152.9 853 71.0
SEGI_23274 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1149.4 823 70.8
Migut.C00687 Erythranthe guttata HOM05D003945 ORTHO05D004625 0.0e+00 1147.9 848 71.8
SalBow8G4281 Salvia bowleyana HOM05D003945 ORTHO05D004625 0.0e+00 1142.5 813 72.7
Phvul.001G016500 Phaseolus vulgaris HOM05D003945 ORTHO05D004625 0.0e+00 1131.3 692 80.8
SGA_v2.0_scaffold24G10266 Striga asiatica HOM05D003945 ORTHO05D004625 0.0e+00 1126.3 881 67.7
Ca_15527_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1120.9 813 73.2
Ca_13337_v3 Cicer arietinum L. HOM05D003945 ORTHO05D004625 0.0e+00 1118.2 841 69.8
Sc02g0006540 Simmondsia chinensis HOM05D003945 ORTHO05D004625 0.0e+00 1117.8 758 74.7
Mapoly0001s0355 Marchantia polymorpha HOM05D003945 ORTHO05D004625 0.0e+00 1110.9 812 68.5
SEGI_40605 Sequoiadendron giganteum HOM05D003945 ORTHO05D004625 0.0e+00 1101.7 814 69.2
Pp3c9_8900 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1088.9 815 67.9
Pp3c15_10300 Physcomitrium patens HOM05D003945 ORTHO05D004625 0.0e+00 1084.7 786 69.6
Rhsim06G0036600 Rhododendron simsii HOM05D003945 ORTHO05D004625 0.0e+00 1084.3 735 77.6
TPR.G15756 Trifolium pratense HOM05D003945 ORTHO05D004625 0.0e+00 1081.6 774 69.6
Oeu019083.2 Olea europaea HOM05D003945 ORTHO05D004625 1.1e-289 1000.0 810 67.0
CSS0002441 Camellia sinensis var. sinensis HOM05D003945 ORTHO05D004625 8.0e-272 940.6 615 74.6
AagrBONN_evm.TU.Sc2ySwM_228.1369 Anthoceros agrestis HOM05D003945 ORTHO05D004625 5.2e-263 911.4 624 68.6
COL.COLO4_26375 Corchorus olitorius HOM05D003945 ORTHO05D004625 5.0e-250 868.2 518 81.7
SHI08218 Sapria himalayana HOM05D003945 ORTHO05D004625 4.4e-246 855.1 578 73.7
TAR625G1327 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.0e-239 833.9 832 57.8
ClCG08G015350 Citrullus lanatus HOM05D003945 ORTHO05D004625 2.4e-236 822.8 536 78.4
TAR625G0556 Trochodendron aralioides HOM05D003945 ORTHO05D004625 1.1e-167 594.7 709 50.9
unitig_899.g15618 Utricularia gibba HOM05D003945 ORTHO05D004625 5.7e-145 519.2 454 58.6
Actinidia15302 Actinidia chinensis HOM05D003945 ORTHO05D004625 7.3e-132 475.7 352 76.4
Actinidia15303 Actinidia chinensis HOM05D003945 ORTHO05D004625 1.7e-128 464.5 330 70.0
HanXRQChr02g0037151 Helianthus annuus HOM05D003945 ORTHO05D004625 9.8e-121 438.7 274 78.1
unitig_899.g15619 Utricularia gibba HOM05D003945 ORTHO05D004625 1.7e-109 401.4 318 72.6
TAR625G0675 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.4e-98 364.4 397 53.9
TAR625G1534 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.0e-81 308.1 581 42.5
Pp3c1_5980 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.8e-58 231.9 156 74.4
arahy.Tifrunner.gnm1.ann1.URD35Y Arachis hypogaea HOM05D003945 ORTHO05D004625 6.5e-48 196.8 133 69.2
SGA_v2.0_scaffold18G08518 Striga asiatica HOM05D003945 ORTHO05D004625 5.3e-42 177.2 165 55.2
CBR_g2789 Chara braunii HOM05D003945 ORTHO05D004625 1.7e-35 155.6 492 29.1
PRCOL_00006675 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 4.2e-31 141.0 458 27.3
PRCOL_00003766 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 2.3e-29 135.2 470 26.6
DCAR_031552 Daucus carota HOM05D003945 ORTHO05D004625 5.2e-29 134.0 76 82.9
CiPaw.15G072700 Carya illinoinensis HOM05D003945 ORTHO05D004625 9.1e-26 123.2 62 91.9
Cre01.g001400 Chlamydomonas reinhardtii HOM05D003945 ORTHO05D004625 5.9e-25 120.6 439 27.1
PRCOL_00001495 Prasinoderma coloniale HOM05D003945 ORTHO05D004625 7.7e-25 120.2 469 27.3
Pp3c1_5940 Physcomitrium patens HOM05D003945 ORTHO05D004625 1.9e-23 115.5 96 63.5
TAR625G0971 Trochodendron aralioides HOM05D003945 ORTHO05D004625 2.0e-17 95.5 122 45.1
CBR_g32472 Chara braunii HOM05D000019 ORTHO05D000002 4.5e-17 94.4 266 27.4
CBR_g38919 Chara braunii HOM05D000019 ORTHO05D000353 7.8e-17 93.6 220 32.3
TPR.G27891 Trifolium pratense HOM05D003945 ORTHO05D004625 5.0e-16 90.9 61 72.1
SGA_v2.0_scaffold210G42079 Striga asiatica HOM05D003945 ORTHO05D004625 6.1e-14 84.0 147 38.1
arahy.Tifrunner.gnm1.ann1.4NEG3Q Arachis hypogaea HOM05D003945 ORTHO05D004625 2.2e-11 75.5 83 48.2
CBR_g37162 Chara braunii HOM05D000019 ORTHO05D000048 6.6e-08 63.9 70 45.7
Lsat_1_v5_gn_5_96440 Lactuca sativa HOM05D003945 ORTHO05D004625 1.6e-06 59.3 38 73.7


User provided reference genes

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