Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 3.7e-83 311.6 169 100.0
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 5.7e-44 181.4 147 68.0
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 1.5e-31 140.2 117 63.2
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 1.5e-31 140.2 117 63.2
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 2.5e-31 139.4 126 59.5
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 7.3e-31 137.9 117 62.4
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 7.3e-31 137.9 102 69.6
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 7.3e-31 137.9 102 69.6
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 7.3e-31 137.9 100 71.0
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 7.3e-31 137.9 120 59.2
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 9.5e-31 137.5 136 58.1
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 1.6e-30 136.7 113 63.7
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 2.1e-30 136.3 99 67.7
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 2.1e-30 136.3 138 57.2
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 2.8e-30 136.0 113 63.7
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 2.8e-30 136.0 105 62.9
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 2.8e-30 136.0 84 76.2
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 2.8e-30 136.0 84 76.2
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 3.6e-30 135.6 90 73.3
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 4.7e-30 135.2 131 54.2
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 4.7e-30 135.2 104 63.5
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 6.1e-30 134.8 86 72.1
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 6.1e-30 134.8 115 60.9
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 6.1e-30 134.8 83 74.7
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 6.1e-30 134.8 131 50.4
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 8.0e-30 134.4 84 75.0
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 8.0e-30 134.4 84 78.6
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 1.0e-29 134.0 125 58.4
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 1.0e-29 134.0 106 62.3
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 1.0e-29 134.0 86 75.6
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 1.4e-29 133.7 114 60.5
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 1.8e-29 133.3 114 60.5
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.8e-29 133.3 90 72.2
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 1.8e-29 133.3 102 72.5
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 2.3e-29 132.9 74 85.1
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 3.1e-29 132.5 114 59.6
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 3.1e-29 132.5 114 59.6
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 3.1e-29 132.5 115 63.5
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 3.1e-29 132.5 88 73.9
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 4.0e-29 132.1 83 75.9
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 4.0e-29 132.1 81 80.2
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 4.0e-29 132.1 86 73.3
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 4.0e-29 132.1 83 73.5
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 5.2e-29 131.7 73 84.9
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 5.2e-29 131.7 80 80.0
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 6.8e-29 131.3 124 56.5
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 6.8e-29 131.3 113 58.4
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 6.8e-29 131.3 134 52.2
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.8e-29 131.3 84 73.8
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 6.8e-29 131.3 87 74.7
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 8.9e-29 131.0 97 69.1
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 8.9e-29 131.0 91 72.5
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.2e-28 130.6 82 78.0
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 1.2e-28 130.6 77 80.5
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 1.2e-28 130.6 80 77.5
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.5e-28 130.2 89 74.2
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 2.0e-28 129.8 92 72.8
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 2.0e-28 129.8 92 72.8
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 2.0e-28 129.8 74 82.4
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 2.0e-28 129.8 97 69.1
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.0e-28 129.8 118 58.5
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 2.6e-28 129.4 70 85.7
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 2.6e-28 129.4 82 76.8
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 2.6e-28 129.4 82 72.0
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 3.4e-28 129.0 128 55.5
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 4.4e-28 128.6 74 82.4
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 4.4e-28 128.6 92 66.3
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 5.8e-28 128.3 86 73.3
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 9.8e-28 127.5 126 52.4
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 9.8e-28 127.5 74 78.4
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 1.7e-27 126.7 86 70.9
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 2.2e-27 126.3 97 69.1
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 2.9e-27 125.9 89 67.4
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 3.7e-27 125.6 74 79.7
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 4.9e-27 125.2 135 48.1
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 4.9e-27 125.2 124 54.0
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 6.4e-27 124.8 93 67.7
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 8.3e-27 124.4 74 79.7
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 8.3e-27 124.4 71 78.9
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 8.3e-27 124.4 74 78.4
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 1.1e-26 124.0 121 52.9
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.1e-26 124.0 82 72.0
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 2.4e-26 122.9 121 52.9
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 3.2e-26 122.5 71 80.3
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 7.0e-26 121.3 100 61.0
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.2e-25 120.6 156 49.4
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-25 120.2 84 70.2
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 2.0e-25 119.8 82 70.7
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 2.0e-25 119.8 117 55.6
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.0e-24 117.5 134 53.0
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.3e-24 117.1 93 66.7
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 2.3e-24 116.3 81 74.1
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 8.6e-24 114.4 74 74.3
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 5.6e-23 111.7 86 64.0
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 5.6e-23 111.7 94 61.7
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 9.5e-23 110.9 153 47.1
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 6.2e-22 108.2 75 64.0
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 8.9e-21 104.4 62 77.4
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 3.4e-20 102.4 73 60.3
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 3.4e-20 102.4 106 51.9
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 1.3e-19 100.5 56 80.4
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 1.6e-17 93.6 69 55.1
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 2.7e-17 92.8 71 69.0
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 7.8e-17 91.3 64 60.9
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.3e-16 90.5 101 40.6
Lsat_1_v5_gn_5_53160 Lactuca sativa HOM05D007267 ORTHO05D009053 1.5e-12 77.0 69 62.3
Lsat_1_v5_gn_6_53880 Lactuca sativa HOM05D007267 ORTHO05D009053 5.8e-12 75.1 70 61.4
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 1.9e-10 70.1 83 50.6
MBI11_g25049_MAGBIO Magnolia biondii HOM05D007267 ORTHO05D009053 9.2e-10 67.8 37 75.7
Nitab4.5_0000157g0140 Nicotiana tabacum HOM05D007267 ORTHO05D009053 2.1e-09 66.6 35 82.9
arahy.Tifrunner.gnm1.ann1.BBFR3C Arachis hypogaea HOM05D003566 ORTHO05D009053 6.0e-09 65.1 60 61.7
Os07g0164200 Oryza sativa ssp. japonica HOM05D007267 ORTHO05D009053 3.0e-08 62.8 39 79.5
Gorai.006G118000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.5e-07 60.5 43 67.4
arahy.Tifrunner.gnm1.ann1.RKVJ8T Arachis hypogaea HOM05D007267 ORTHO05D009053 7.3e-07 58.2 35 74.3
Gohir.D09G100550 Gossypium hirsutum HOM05D007267 ORTHO05D009053 7.3e-07 58.2 44 65.9


User provided reference genes

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