Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0267211 Helianthus annuus HOM05D008711 ORTHO05D010134 5.3e-148 527.7 276 100.0
HanXRQChr13g0411941 Helianthus annuus HOM05D008711 ORTHO05D010134 1.1e-142 510.0 307 89.6
HanXRQChr04g0112501 Helianthus annuus HOM05D008711 ORTHO05D010134 9.7e-142 506.9 307 89.3
HanXRQChr02g0051481 Helianthus annuus HOM05D008711 ORTHO05D010134 5.2e-119 431.4 303 79.9
HanXRQChr05g0153861 Helianthus annuus HOM05D008711 ORTHO05D010134 1.6e-112 409.8 273 83.2
HanXRQChr13g0388401 Helianthus annuus HOM05D008711 ORTHO05D010134 9.5e-89 330.9 208 79.8
HanXRQChr09g0269311 Helianthus annuus HOM05D008711 ORTHO05D010134 1.8e-71 273.5 169 80.5
HanXRQChr15g0469701 Helianthus annuus HOM05D008711 ORTHO05D010134 1.2e-38 164.5 249 42.2
HanXRQChr01g0007361 Helianthus annuus HOM05D008711 ORTHO05D010134 2.5e-36 156.8 249 41.4
HanXRQChr13g0421391 Helianthus annuus HOM05D008711 ORTHO05D010134 2.5e-36 156.8 246 41.5
HanXRQChr16g0506101 Helianthus annuus HOM05D008711 ORTHO05D010134 3.0e-34 149.8 171 51.5
Lsat_1_v5_gn_4_120840 Lactuca sativa HOM05D008711 ORTHO05D010134 1.7e-24 117.5 255 30.6
HanXRQChr05g0155991 Helianthus annuus HOM05D008711 ORTHO05D010134 3.7e-24 116.3 251 31.9
Lsat_1_v5_gn_5_68461 Lactuca sativa HOM05D008975 ORTHO05D010134 6.3e-24 115.5 247 31.2
HanXRQChr17g0570621 Helianthus annuus HOM05D008711 ORTHO05D010134 3.1e-23 113.2 268 34.3
Lsat_1_v5_gn_6_40041 Lactuca sativa HOM05D008711 ORTHO05D010134 4.1e-23 112.8 266 30.5
Lsat_1_v5_gn_1_87921 Lactuca sativa HOM05D008711 ORTHO05D010134 2.9e-21 106.7 270 28.9
HanXRQChr11g0350941 Helianthus annuus HOM05D008711 ORTHO05D010134 3.8e-21 106.3 87 54.0
HanXRQChr11g0328781 Helianthus annuus HOM05D008711 ORTHO05D010134 5.0e-21 105.9 232 34.1
Lsat_1_v5_gn_3_67000 Lactuca sativa HOM05D008711 ORTHO05D010134 8.5e-21 105.1 274 28.1
Lsat_1_v5_gn_1_118581 Lactuca sativa HOM05D008975 ORTHO05D010134 2.7e-19 100.1 265 30.6
HanXRQChr10g0309221 Helianthus annuus HOM05D008711 ORTHO05D010134 3.6e-19 99.8 182 37.4
Lsat_1_v5_gn_7_35221 Lactuca sativa HOM05D008975 ORTHO05D010134 6.7e-18 95.5 239 31.0
Lsat_1_v5_gn_9_114661 Lactuca sativa HOM05D008975 ORTHO05D010134 8.3e-16 88.6 229 27.9
HanXRQChr08g0219021 Helianthus annuus HOM05D008711 ORTHO05D010134 3.5e-14 83.2 197 35.5
HanXRQChr02g0057461 Helianthus annuus HOM05D008711 ORTHO05D010134 1.3e-13 81.3 193 32.6
Lsat_1_v5_gn_3_59061 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-13 81.3 236 27.1
Lsat_1_v5_gn_5_60441 Lactuca sativa HOM05D008711 ORTHO05D010134 5.0e-13 79.3 120 37.5
Lsat_1_v5_gn_5_57501 Lactuca sativa HOM05D008711 ORTHO05D010134 2.7e-11 73.6 216 28.7
Lsat_1_v5_gn_1_46460 Lactuca sativa HOM05D008975 ORTHO05D010134 3.0e-10 70.1 170 29.4
Lsat_1_v5_gn_7_51421 Lactuca sativa HOM05D008975 ORTHO05D010134 8.8e-10 68.6 176 27.3
Lsat_1_v5_gn_4_114181 Lactuca sativa HOM05D008975 ORTHO05D010134 1.5e-09 67.8 177 26.6
Lsat_1_v5_gn_1_82100 Lactuca sativa HOM05D008975 ORTHO05D010134 2.0e-09 67.4 250 25.2
Lsat_1_v5_gn_1_81260 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-08 64.7 159 27.7
Lsat_1_v5_gn_8_156001 Lactuca sativa HOM05D008975 ORTHO05D010134 1.3e-08 64.7 166 30.7
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-08 64.3 226 26.5
HanXRQChr11g0332891 Helianthus annuus HOM05D008711 ORTHO05D220429 2.8e-08 63.5 77 53.2
Lsat_1_v5_gn_8_17220 Lactuca sativa HOM05D008711 ORTHO05D010134 1.1e-07 61.6 203 26.1
Lsat_1_v5_gn_7_107900 Lactuca sativa HOM05D008975 ORTHO05D010134 1.8e-07 60.8 236 25.4
Sc11g0006580 Simmondsia chinensis HOM05D000420 ORTHO05D000110 1.8e-07 60.8 122 27.9
HanXRQChr16g0520831 Helianthus annuus HOM05D008711 ORTHO05D010134 2.4e-07 60.5 88 40.9
Lsat_1_v5_gn_5_46440 Lactuca sativa HOM05D008975 ORTHO05D010134 2.4e-07 60.5 240 26.7
Lsat_1_v5_gn_6_48940 Lactuca sativa HOM05D008975 ORTHO05D010134 3.1e-07 60.1 68 45.6
Lsat_1_v5_gn_4_33981 Lactuca sativa HOM05D008975 ORTHO05D010134 1.2e-06 58.2 146 27.4
ECA233G5623 Erigeron canadensis HOM05D000107 ORTHO05D000568 2.0e-06 57.4 154 26.6
Lsat_1_v5_gn_7_88301 Lactuca sativa HOM05D008975 ORTHO05D010134 4.5e-06 56.2 146 30.1
HanXRQChr17g0568431 Helianthus annuus HOM05D002450 ORTHO05D002953 5.9e-06 55.8 72 66.7
HanXRQChr06g0173991 Helianthus annuus HOM05D008711 ORTHO05D010134 7.7e-06 55.5 111 32.4


User provided reference genes

Program Settings