Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0267151 Helianthus annuus HOM05D006923 ORTHO05D008697 1.6e-230 802.4 401 100.0
ECA246G0266 Erigeron canadensis HOM05D000793 ORTHO05D000783 8.6e-123 444.5 292 81.2
Dinv31139 Davidia involucrata HOM05D006923 ORTHO05D008697 3.9e-115 419.1 280 76.4
Nn4g22963 Nelumbo nucifera HOM05D006923 ORTHO05D008697 1.1e-112 411.0 285 72.3
SGA_v2.0_scaffold166G38306 Striga asiatica HOM05D006923 ORTHO05D008697 5.8e-111 405.2 303 69.6
Migut.L01372 Erythranthe guttata HOM05D006923 ORTHO05D008697 2.2e-110 403.3 280 73.9
MSTRG.649 Avicennia marina HOM05D006923 ORTHO05D008697 1.9e-109 400.2 280 72.9
GSVIVG01020133001 Vitis vinifera HOM05D006923 ORTHO05D008697 2.4e-109 399.8 283 72.1
Actinidia24653 Actinidia chinensis HOM05D006923 ORTHO05D008697 3.5e-108 396.0 283 72.1
Lj6C798T8 Lonicera japonica HOM05D006923 ORTHO05D008697 6.0e-108 395.2 297 70.0
Sopen04g001110 Solanum pennellii HOM05D006923 ORTHO05D008697 6.0e-108 395.2 284 72.9
CSS0003222 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.3e-107 394.0 278 71.6
QL03p067501 Quercus lobata HOM05D006923 ORTHO05D008697 1.3e-107 394.0 251 77.7
Solyc04g005090.4 Solanum lycopersicum HOM05D006923 ORTHO05D008697 1.7e-107 393.7 282 72.7
Cfa009080 Carpinus fangiana HOM05D006923 ORTHO05D008697 3.0e-107 392.9 251 76.9
CiPaw.06G077400 Carya illinoinensis HOM05D006923 ORTHO05D008697 3.9e-107 392.5 258 74.8
Lsat_1_v5_gn_7_91800 Lactuca sativa HOM05D006923 ORTHO05D008697 6.6e-107 391.7 253 80.2
ClCG05G024880 Citrullus lanatus HOM05D006923 ORTHO05D008697 1.1e-106 391.0 292 67.8
Sed0028145 Sechium edule HOM05D006923 ORTHO05D008697 1.1e-106 391.0 295 67.8
COL.COLO4_36266 Corchorus olitorius HOM05D006923 ORTHO05D008697 3.3e-106 389.4 287 69.0
TAR629G1985 Trochodendron aralioides HOM05D006923 ORTHO05D008697 3.3e-106 389.4 281 70.8
Manes.05G093700 Manihot esculenta HOM05D006923 ORTHO05D008697 5.6e-106 388.7 286 69.6
SalBow2G1484 Salvia bowleyana HOM05D006923 ORTHO05D008697 7.3e-106 388.3 291 68.0
SalBow2G2758 Salvia bowleyana HOM05D006923 ORTHO05D008697 7.3e-106 388.3 291 68.0
Atru.chr11.1922 Acer truncatum HOM05D006923 ORTHO05D008697 1.2e-105 387.5 299 69.6
MD13G1084200 Malus domestica HOM05D006923 ORTHO05D008697 1.6e-105 387.1 290 69.7
Gohir.A05G320000 Gossypium hirsutum HOM05D006923 ORTHO05D008697 6.2e-105 385.2 284 69.7
RcHm_v2.0_Chr4g0444951 Rosa chinensis HOM05D006923 ORTHO05D008697 6.2e-105 385.2 266 71.8
Cpa.g.sc5.315 Carica papaya HOM05D006923 ORTHO05D008697 8.1e-105 384.8 284 70.8
PGSC0003DMG400001928 Solanum tuberosum HOM05D006923 ORTHO05D008697 8.1e-105 384.8 287 71.1
Gorai.009G345900 Gossypium raimondii HOM05D006923 ORTHO05D008697 2.4e-104 383.3 284 68.7
CAN.G25.5 Capsicum annuum HOM05D006923 ORTHO05D008697 3.1e-104 382.9 293 68.9
Ciclev10032274m.g Citrus clementina HOM05D006923 ORTHO05D008697 1.2e-103 380.9 284 69.7
FvH4_4g35320 Fragaria vesca HOM05D006923 ORTHO05D008697 2.0e-103 380.2 281 70.8
FAN12G2795 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.0e-103 380.2 281 70.8
FAN07G0582 Fragaria x ananassa HOM05D006923 ORTHO05D008697 3.4e-103 379.4 266 72.2
Peaxi162Scf00266g00035 Petunia axillaris HOM05D006923 ORTHO05D008697 3.4e-103 379.4 244 77.0
FAN22G1061 Fragaria x ananassa HOM05D006923 ORTHO05D008697 5.8e-103 378.6 266 72.2
Gohir.D05G322300 Gossypium hirsutum HOM05D006923 ORTHO05D008697 7.6e-103 378.3 284 68.0
Rhsim12G0127000 Rhododendron simsii HOM05D006923 ORTHO05D008697 1.1e-101 374.4 251 74.1
PSO591G0274 Papaver somniferum HOM05D006923 ORTHO05D008697 2.4e-101 373.2 294 65.0
Lj2g0018338 Lotus japonicus HOM05D006923 ORTHO05D008697 4.2e-101 372.5 244 74.6
TPR.G26715 Trifolium pratense HOM05D006923 ORTHO05D008697 4.2e-101 372.5 259 71.0
Aqoxy3G03167 Aquilegia oxysepala HOM05D006923 ORTHO05D008697 5.4e-101 372.1 281 69.0
Thecc.02G238100 Theobroma cacao HOM05D006923 ORTHO05D008697 7.1e-101 371.7 283 68.2
PGR102G0681 Punica granatum HOM05D006923 ORTHO05D008697 1.2e-100 370.9 266 68.8
unitig_26.g10329 Utricularia gibba HOM05D006923 ORTHO05D008697 7.8e-100 368.2 285 67.7
AUR62039449 Chenopodium quinoa HOM05D006923 ORTHO05D008697 2.3e-99 366.7 273 68.1
Cc11_g13930 Coffea canephora HOM05D006923 ORTHO05D008697 3.0e-99 366.3 249 73.5
THA.LOC104819679 Tarenaya hassleriana HOM05D006923 ORTHO05D008697 3.0e-99 366.3 284 65.1
Ca_05074_v3 Cicer arietinum L. HOM05D006923 ORTHO05D008697 3.9e-99 365.9 244 73.4
Psat2g114680 Pisum sativum HOM05D006923 ORTHO05D008697 1.5e-98 364.0 256 71.1
Phvul.002G078400 Phaseolus vulgaris HOM05D006923 ORTHO05D008697 2.5e-98 363.2 244 73.0
Glyma.02G026400 Glycine max HOM05D006923 ORTHO05D008697 1.6e-97 360.5 265 67.5
Potri.008G191900 Populus trichocarpa HOM05D006923 ORTHO05D008697 1.1e-96 357.8 275 68.0
CSS0013336 Camellia sinensis var. sinensis HOM05D006923 ORTHO05D008697 1.8e-96 357.1 242 74.4
Carub.0002s0542 Capsella rubella HOM05D006923 ORTHO05D008697 3.1e-96 356.3 291 61.9
Hund25304 Selenicereus undatus HOM05D006923 ORTHO05D008697 5.3e-96 355.5 307 60.6
vmacro16302 Vaccinium macrocarpon HOM05D006923 ORTHO05D008697 6.9e-96 355.1 283 66.4
CDE04G0355 Ceratophyllum demersum HOM05D006923 ORTHO05D008697 1.2e-95 354.4 290 61.7
AT1G59840 Arabidopsis thaliana HOM05D006923 ORTHO05D008697 2.6e-95 353.2 247 68.8
Prupe.1G262600 Prunus persica HOM05D006923 ORTHO05D008697 3.4e-95 352.8 267 68.9
arahy.Tifrunner.gnm1.ann1.EW3DBQ Arachis hypogaea HOM05D006923 ORTHO05D008697 4.5e-95 352.4 254 69.3
Lalb_Chr16g0382621 Lupinus albus HOM05D006923 ORTHO05D008697 4.5e-95 352.4 244 71.3
CsaV3_5G032010 Cucumis sativus L. HOM05D006923 ORTHO05D008697 7.6e-95 351.7 272 68.4
Nitab4.5_0005168g0020 Nicotiana tabacum HOM05D006923 ORTHO05D008697 7.6e-95 351.7 286 66.1
Thhalv10023990m.g Eutrema salsugineum HOM05D006923 ORTHO05D008697 9.9e-95 351.3 259 66.4
Aa31LG2G10350 Aethionema arabicum HOM05D006923 ORTHO05D008697 1.3e-94 350.9 296 60.5
EL10Ac6g13089 Beta vulgaris HOM05D006923 ORTHO05D008697 6.4e-94 348.6 316 59.2
AL2G16930 Arabidopsis lyrata HOM05D006923 ORTHO05D008697 3.2e-93 346.3 262 66.0
CANSAT01G2170 Cannabis sativa HOM05D006923 ORTHO05D008697 4.2e-93 345.9 289 64.4
BcaB04g20234 Brassica carinata HOM05D006923 ORTHO05D008697 5.4e-93 345.5 242 68.6
Sp2g04730 Schrenkiella parvula HOM05D006923 ORTHO05D008697 3.5e-92 342.8 261 64.8
BolC1t03615H Brassica oleracea HOM05D006923 ORTHO05D008697 2.3e-91 340.1 266 65.0
C01p36540 Brassica napus HOM05D006923 ORTHO05D008697 1.5e-90 337.4 248 67.3
BcaC09g49455 Brassica carinata HOM05D006923 ORTHO05D008697 5.6e-90 335.5 258 65.1
Sc11g0001490 Simmondsia chinensis HOM05D006923 ORTHO05D008697 4.8e-89 332.4 268 64.9
Aa31LG1G14870 Aethionema arabicum HOM05D006923 ORTHO05D008697 8.1e-89 331.6 262 63.0
arahy.Tifrunner.gnm1.ann1.NUE0XS Arachis hypogaea HOM05D006923 ORTHO05D008697 8.1e-89 331.6 236 69.5
A01p28870 Brassica napus HOM05D006923 ORTHO05D008697 2.6e-87 326.6 266 62.4
BraA01t03022Z Brassica rapa HOM05D006923 ORTHO05D008697 3.4e-87 326.2 278 60.8
BcaC06g31796 Brassica carinata HOM05D006923 ORTHO05D008697 3.8e-86 322.8 243 65.0
BcaNung06340 Brassica carinata HOM05D006923 ORTHO05D008697 1.1e-85 321.2 226 68.1
TWI18G0575 Tripterygium wilfordii HOM05D006923 ORTHO05D008697 3.5e-84 316.2 259 64.5
Sabra08G0145400 Salix brachista HOM05D006923 ORTHO05D008697 6.7e-83 312.0 225 70.7
HPP92_026426 Vanilla planifolia HOM05D006923 ORTHO05D008697 1.5e-82 310.8 268 61.2
Os04g0650500 Oryza sativa ssp. japonica HOM05D006923 ORTHO05D008697 5.6e-82 308.9 238 64.7
Haze_12112 Corylus avellana HOM05D006923 ORTHO05D008697 3.7e-81 306.2 194 77.8
ATR0624G013 Amborella trichopoda HOM05D006923 ORTHO05D008697 5.3e-80 302.4 248 61.3
MELO3C012038.2 Cucumis melo HOM05D006923 ORTHO05D008697 2.6e-79 300.1 245 64.5
Zm00001eb068300 Zea mays HOM05D006923 ORTHO05D008697 2.6e-79 300.1 239 65.7
Medtr5g037050 Medicago truncatula HOM05D006923 ORTHO05D008697 8.4e-78 295.0 263 61.2
VMungo1215G1603 Vigna mungo HOM05D006923 ORTHO05D008697 2.5e-74 283.5 219 65.8
AUR62026532 Chenopodium quinoa HOM05D006923 ORTHO05D008697 1.8e-72 277.3 205 67.3
CARHR053250 Cardamine hirsuta HOM05D006923 ORTHO05D008697 2.9e-70 270.0 192 67.7
Duzib268G0289 Durio zibethinus HOM05D006923 ORTHO05D008697 8.5e-70 268.5 287 54.0
Mapoly0001s0231 Marchantia polymorpha HOM05D006923 ORTHO05D008697 1.5e-58 231.1 228 52.2
FAN17G2763 Fragaria x ananassa HOM05D006923 ORTHO05D008697 2.6e-58 230.3 266 50.0
Pp3c3_23340 Physcomitrium patens HOM05D006923 ORTHO05D008697 2.6e-58 230.3 236 51.7
CBR_g3926 Chara braunii HOM05D006923 ORTHO05D008697 4.5e-55 219.5 248 46.0
MBI17_g35870_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 2.5e-45 187.2 129 71.3
MCO16G195 Micromonas commoda HOM05D006923 ORTHO05D008697 6.3e-41 172.6 246 39.0
Nitab4.5_0001908g0040 Nicotiana tabacum HOM05D006923 ORTHO05D008697 1.1e-40 171.8 280 41.1
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 2.2e-38 164.1 244 38.9
Cre08.g382300 Chlamydomonas reinhardtii HOM05D006923 ORTHO05D008697 3.8e-38 163.3 233 37.3
PSO832G3782 Papaver somniferum HOM05D006923 ORTHO05D008697 1.1e-32 145.2 94 72.3
Sed0022420 Sechium edule HOM05D006923 ORTHO05D008697 2.5e-29 134.0 133 55.6
SEGI_22816 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.0e-19 102.1 85 60.0
AagrBONN_evm.TU.Sc2ySwM_117.4092 Anthoceros agrestis HOM05D006923 ORTHO05D008697 1.5e-18 98.2 135 42.2
MBI17_g35869_MAGBIO Magnolia biondii HOM05D006923 ORTHO05D008697 3.4e-18 97.1 94 54.3
VMungo1215G3051 Vigna mungo HOM05D006923 ORTHO05D008697 1.1e-13 82.0 53 71.7
Hma1.2p1_0289F.1_g114510 Hydrangea macrophylla HOM05D006923 ORTHO05D008697 7.3e-13 79.3 62 62.9
CiPaw.05G144000 Carya illinoinensis HOM05D006923 ORTHO05D008697 2.6e-10 70.9 104 43.3
A07p27760 Brassica napus HOM05D006923 ORTHO05D024228 1.7e-09 68.2 70 52.9
BraA07t30415Z Brassica rapa HOM05D006923 ORTHO05D024228 1.7e-09 68.2 70 52.9
BraA08t33759Z Brassica rapa HOM05D020796 ORTHO05D024228 4.9e-09 66.6 70 51.4
SEGI_22360 Sequoiadendron giganteum HOM05D006923 ORTHO05D008697 1.9e-08 64.7 53 50.9
Rhsim13G0125100 Rhododendron simsii HOM05D000017 ORTHO05D000013 2.3e-06 57.8 53 54.7


User provided reference genes

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