Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0267141 Helianthus annuus HOM05D001141 ORTHO05D220206 1.9e-49 198.7 91 100.0
HanXRQChr08g0235101 Helianthus annuus HOM05D001141 ORTHO05D001088 1.0e-10 70.1 48 70.8
Lsat_1_v5_gn_5_15800 Lactuca sativa HOM05D001141 ORTHO05D001088 8.5e-10 67.0 48 66.7
ECA246G4296 Erigeron canadensis HOM05D001141 ORTHO05D001088 3.2e-09 65.1 48 66.7
Dinv20609 Davidia involucrata HOM05D001141 ORTHO05D001088 4.7e-08 61.2 48 58.3
Dinv38548 Davidia involucrata HOM05D001141 ORTHO05D001088 6.1e-08 60.8 48 60.4
Rhsim12G0167000 Rhododendron simsii HOM05D001141 ORTHO05D001088 7.9e-08 60.5 48 58.3
TAR374G0280 Trochodendron aralioides HOM05D001141 ORTHO05D001088 1.0e-07 60.1 48 58.3
vmacro16635 Vaccinium macrocarpon HOM05D001141 ORTHO05D001088 1.0e-07 60.1 48 56.2
MELO3C026267.2 Cucumis melo HOM05D001141 ORTHO05D001088 1.8e-07 59.3 48 56.2
Lj4g0011063 Lotus japonicus HOM05D001141 ORTHO05D001088 1.8e-07 59.3 48 58.3
Sed0023115 Sechium edule HOM05D001141 ORTHO05D001088 1.8e-07 59.3 48 56.2
Aqoxy5G03792 Aquilegia oxysepala HOM05D001141 ORTHO05D001088 2.3e-07 58.9 48 58.3
arahy.Tifrunner.gnm1.ann1.CE95IG Arachis hypogaea HOM05D001141 ORTHO05D001088 2.3e-07 58.9 48 58.3
arahy.Tifrunner.gnm1.ann1.U3SYI0 Arachis hypogaea HOM05D001141 ORTHO05D001088 2.3e-07 58.9 48 58.3
CsaV3_1G001190 Cucumis sativus L. HOM05D001141 ORTHO05D001088 3.0e-07 58.5 48 56.2
Lj4g0005788 Lotus japonicus HOM05D001141 ORTHO05D001088 3.0e-07 58.5 48 56.2
Nn4g22638 Nelumbo nucifera HOM05D001141 ORTHO05D001088 3.0e-07 58.5 48 54.2
DCAR_018526 Daucus carota HOM05D001141 ORTHO05D001088 5.1e-07 57.8 48 54.2
MBI10_g00743_MAGBIO Magnolia biondii HOM05D001141 ORTHO05D001088 5.1e-07 57.8 53 54.7
ClCG06G017290 Citrullus lanatus HOM05D001141 ORTHO05D001088 6.7e-07 57.4 48 56.2
Gohir.D03G104300 Gossypium hirsutum HOM05D001141 ORTHO05D001088 6.7e-07 57.4 48 54.2
Gorai.003G110100 Gossypium raimondii HOM05D001141 ORTHO05D001088 6.7e-07 57.4 48 54.2
MD06G1167500 Malus domestica HOM05D001141 ORTHO05D001088 6.7e-07 57.4 48 56.2
QL10p007889 Quercus lobata HOM05D001141 ORTHO05D001088 6.7e-07 57.4 50 56.0
Gohir.A03G061700 Gossypium hirsutum HOM05D001141 ORTHO05D001088 8.8e-07 57.0 48 52.1
Lalb_Chr07g0182931 Lupinus albus HOM05D001141 ORTHO05D001088 8.8e-07 57.0 50 52.0
Oeu040854.4 Olea europaea HOM05D001141 ORTHO05D001088 8.8e-07 57.0 48 56.2
TAR371G0555 Trochodendron aralioides HOM05D001141 ORTHO05D001088 8.8e-07 57.0 48 54.2
Prupe.5G167200 Prunus persica HOM05D001141 ORTHO05D001088 1.1e-06 56.6 50 54.0
RcHm_v2.0_Chr7g0192801 Rosa chinensis HOM05D001141 ORTHO05D001088 1.1e-06 56.6 48 56.2
unitig_37.g12745 Utricularia gibba HOM05D001141 ORTHO05D001088 1.1e-06 56.6 48 56.2
Actinidia25113 Actinidia chinensis HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 54.2
FvH4_5g06060 Fragaria vesca HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 56.2
FAN04G3202 Fragaria x ananassa HOM05D001141 ORTHO05D003504 1.5e-06 56.2 48 56.2
FAN08G2678 Fragaria x ananassa HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 56.2
FAN13G0879 Fragaria x ananassa HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 56.2
FAN18G3386 Fragaria x ananassa HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 56.2
Hma1.2p1_0046F.1_g026980 Hydrangea macrophylla HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 54.2
Nn3g16739 Nelumbo nucifera HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 54.2
PGSC0003DMG400026989 Solanum tuberosum HOM05D001141 ORTHO05D001088 1.5e-06 56.2 48 54.2
CSS0021986 Camellia sinensis var. sinensis HOM05D001141 ORTHO05D001088 2.0e-06 55.8 48 56.2
Solyc06g071680.4 Solanum lycopersicum HOM05D001141 ORTHO05D001088 2.0e-06 55.8 48 54.2
Sopen06g027990 Solanum pennellii HOM05D001141 ORTHO05D001088 2.0e-06 55.8 48 54.2
Duzib068G0796 Durio zibethinus HOM05D001141 ORTHO05D001088 2.6e-06 55.5 48 54.2
MD14G1173000 Malus domestica HOM05D001141 ORTHO05D001088 2.6e-06 55.5 48 54.2
Nitab4.5_0000003g0760 Nicotiana tabacum HOM05D001141 ORTHO05D003504 2.6e-06 55.5 48 54.2
Actinidia19123 Actinidia chinensis HOM05D001141 ORTHO05D001088 3.3e-06 55.1 48 54.2
Actinidia24587 Actinidia chinensis HOM05D001141 ORTHO05D001088 3.3e-06 55.1 48 54.2
CiPaw.12G030000 Carya illinoinensis HOM05D001141 ORTHO05D001088 3.3e-06 55.1 48 52.1
Glyma.05G040600 Glycine max HOM05D001141 ORTHO05D001088 3.3e-06 55.1 48 54.2
Glyma.17G085700 Glycine max HOM05D001141 ORTHO05D001088 3.3e-06 55.1 48 54.2
Ca_16146_v3 Cicer arietinum L. HOM05D001141 ORTHO05D001088 4.4e-06 54.7 50 50.0
DCAR_026168 Daucus carota HOM05D001141 ORTHO05D001088 4.4e-06 54.7 48 50.0
Phvul.003G203800 Phaseolus vulgaris HOM05D001141 ORTHO05D001088 4.4e-06 54.7 50 50.0
SGA_v2.0_scaffold114G31814 Striga asiatica HOM05D001141 ORTHO05D001088 4.4e-06 54.7 48 54.2
SGA_v2.0_scaffold90G27858 Striga asiatica HOM05D001141 ORTHO05D001088 4.4e-06 54.7 48 54.2
CAN.G993.26 Capsicum annuum HOM05D001141 ORTHO05D001088 5.7e-06 54.3 48 52.1
Manes.14G061800 Manihot esculenta HOM05D001141 ORTHO05D001088 5.7e-06 54.3 48 54.2
Nitab4.5_0002358g0040 Nicotiana tabacum HOM05D001141 ORTHO05D003504 5.7e-06 54.3 48 52.1
Thecc.03G021200 Theobroma cacao HOM05D001141 ORTHO05D001088 5.7e-06 54.3 48 52.1
TAR622G0353 Trochodendron aralioides HOM05D001141 ORTHO05D001088 5.7e-06 54.3 48 54.2
Aqoxy7G02574 Aquilegia oxysepala HOM05D001141 ORTHO05D001088 7.4e-06 53.9 48 45.8
Peaxi162Scf00689g00017 Petunia axillaris HOM05D001141 ORTHO05D001088 7.4e-06 53.9 48 52.1
TWI23G0266 Tripterygium wilfordii HOM05D001141 ORTHO05D001088 7.4e-06 53.9 50 52.0
VMungo1215G3233 Vigna mungo HOM05D001141 ORTHO05D001088 7.4e-06 53.9 50 50.0
Atru.chr9.2555 Acer truncatum HOM05D001141 ORTHO05D001088 9.7e-06 53.5 50 52.0
Cpa.g.sc110.13 Carica papaya HOM05D001141 ORTHO05D001088 9.7e-06 53.5 46 52.2
Cfa019198 Carpinus fangiana HOM05D001141 ORTHO05D001088 9.7e-06 53.5 48 54.2
Lalb_Chr12g0201841 Lupinus albus HOM05D001141 ORTHO05D001088 9.7e-06 53.5 48 54.2
Sc12g0005070 Simmondsia chinensis HOM05D001141 ORTHO05D001088 9.7e-06 53.5 51 45.1


User provided reference genes

Program Settings