Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 6.9e-60 233.8 120 100.0
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 3.1e-36 155.2 108 71.3
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 5.5e-33 144.4 108 74.1
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 9.7e-22 107.1 106 52.8
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 1.7e-21 106.3 106 50.0
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 4.8e-21 104.8 104 51.0
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 8.3e-21 104.0 106 48.1
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.1e-20 103.6 97 54.6
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 2.4e-20 102.4 104 49.0
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 2.4e-20 102.4 93 57.0
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 4.1e-20 101.7 107 50.5
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 7.0e-20 100.9 97 52.6
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 9.1e-20 100.5 109 46.8
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 1.6e-19 99.8 105 49.5
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 2.0e-19 99.4 98 53.1
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 2.7e-19 99.0 102 53.9
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 4.5e-19 98.2 92 53.3
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 5.9e-19 97.8 87 57.5
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 5.9e-19 97.8 108 48.1
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 5.9e-19 97.8 111 45.0
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 1.0e-18 97.1 97 50.5
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 1.7e-18 96.3 108 47.2
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 1.7e-18 96.3 108 47.2
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 2.9e-18 95.5 75 60.0
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 2.9e-18 95.5 75 60.0
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 3.8e-18 95.1 108 46.3
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 6.5e-18 94.4 101 46.5
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 8.5e-18 94.0 99 51.5
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 8.5e-18 94.0 70 61.4
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 1.1e-17 93.6 109 49.5
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 1.1e-17 93.6 94 54.3
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 2.5e-17 92.4 97 51.5
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 2.5e-17 92.4 97 50.5
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 5.5e-17 91.3 90 51.1
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 7.2e-17 90.9 105 47.6
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 9.4e-17 90.5 92 50.0
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 9.4e-17 90.5 100 46.0
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.7e-16 89.0 93 48.4
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 3.6e-16 88.6 91 49.5
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 3.6e-16 88.6 89 49.4
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 8.0e-16 87.4 90 51.1
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 1.0e-15 87.0 109 45.9
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.8e-15 86.3 98 44.9
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 1.8e-15 86.3 90 51.1
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 1.8e-15 86.3 80 51.2
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 3.0e-15 85.5 89 50.6
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 4.0e-15 85.1 106 43.4
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 5.2e-15 84.7 109 45.0
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 6.8e-15 84.3 90 47.8
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 8.8e-15 84.0 115 43.5
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 1.2e-14 83.6 80 51.2
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.5e-14 83.2 94 47.9
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 1.5e-14 83.2 115 44.3
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 2.0e-14 82.8 66 54.5
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 2.0e-14 82.8 66 54.5
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 3.4e-14 82.0 65 55.4
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 3.4e-14 82.0 61 57.4
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 4.4e-14 81.6 57 64.9
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 7.5e-14 80.9 57 63.2
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 9.8e-14 80.5 68 57.4
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 1.3e-13 80.1 70 55.7
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 1.7e-13 79.7 61 57.4
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 2.2e-13 79.3 57 61.4
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 3.7e-13 78.6 61 60.7
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 4.8e-13 78.2 65 53.8
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 8.3e-13 77.4 77 48.1
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 3.1e-12 75.5 107 39.3
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 3.1e-12 75.5 63 54.0
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 9.1e-12 73.9 58 55.2
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 2.0e-11 72.8 72 48.6
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 1.0e-10 70.5 65 47.7
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 1.7e-10 69.7 55 60.0
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 2.9e-10 68.9 75 49.3
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 2.9e-10 68.9 61 44.3
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 1.1e-09 67.0 72 37.5
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 7.2e-09 64.3 85 37.6
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 1.4e-07 60.1 86 38.4
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 1.8e-07 59.7 79 38.0
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 2.3e-07 59.3 40 65.0
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 4.0e-07 58.5 115 33.9
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 5.2e-07 58.2 40 62.5
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 6.8e-07 57.8 85 35.3
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.2e-06 57.0 62 46.8


User provided reference genes

Program Settings