Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0266871 Helianthus annuus HOM05D006784 ORTHO05D008508 2.7e-183 645.2 324 100.0
ECA232G1810 Erigeron canadensis HOM05D006784 ORTHO05D008508 4.8e-140 501.5 316 79.4
Lsat_1_v5_gn_4_133060 Lactuca sativa HOM05D006784 ORTHO05D008508 5.3e-131 471.5 309 76.7
Dinv08766 Davidia involucrata HOM05D006784 ORTHO05D008508 3.9e-118 428.7 304 69.7
Actinidia01543 Actinidia chinensis HOM05D006784 ORTHO05D008508 3.1e-115 419.1 305 67.5
CSS0003574 Camellia sinensis var. sinensis HOM05D006784 ORTHO05D008508 4.1e-115 418.7 300 67.7
Oeu035045.1 Olea europaea HOM05D006784 ORTHO05D008508 2.9e-113 412.5 303 65.3
GSVIVG01037159001 Vitis vinifera HOM05D006784 ORTHO05D008508 1.5e-112 410.2 293 66.6
Thecc.08G168600 Theobroma cacao HOM05D006784 ORTHO05D008508 1.2e-111 407.1 295 65.4
DCAR_003507 Daucus carota HOM05D006784 ORTHO05D008508 3.6e-111 405.6 300 65.3
Potri.013G095300 Populus trichocarpa HOM05D006784 ORTHO05D008508 1.8e-110 403.3 301 64.1
Sabra13G0081300 Salix brachista HOM05D006784 ORTHO05D008508 4.0e-110 402.1 301 64.1
CANSAT11G0581 Cannabis sativa HOM05D006784 ORTHO05D008508 5.2e-110 401.7 300 65.3
Cc10_g16080 Coffea canephora HOM05D006784 ORTHO05D008508 5.2e-110 401.7 298 64.8
Gorai.009G262200 Gossypium raimondii HOM05D006784 ORTHO05D008508 2.0e-109 399.8 321 61.1
Migut.C01398 Erythranthe guttata HOM05D006784 ORTHO05D008508 2.6e-109 399.4 298 65.1
Atru.chr13.2579 Acer truncatum HOM05D006784 ORTHO05D008508 4.4e-109 398.7 299 64.5
TAR376G1107 Trochodendron aralioides HOM05D006784 ORTHO05D008508 6.3e-108 394.8 282 66.7
Manes.02G202800 Manihot esculenta HOM05D006784 ORTHO05D008508 2.4e-107 392.9 324 59.6
RcHm_v2.0_Chr6g0249611 Rosa chinensis HOM05D006784 ORTHO05D008508 3.1e-107 392.5 309 62.8
Rhsim12G0001900 Rhododendron simsii HOM05D006784 ORTHO05D008508 4.1e-107 392.1 311 63.7
Lalb_Chr15g0080091 Lupinus albus HOM05D006784 ORTHO05D008508 1.6e-106 390.2 305 62.0
FvH4_2g00320 Fragaria vesca HOM05D006784 ORTHO05D008508 3.5e-106 389.0 321 60.7
Sopen11g020490 Solanum pennellii HOM05D006784 ORTHO05D008508 5.9e-106 388.3 305 63.9
TPR.G25500 Trifolium pratense HOM05D006784 ORTHO05D008508 7.7e-106 387.9 293 61.1
Sed0009601 Sechium edule HOM05D006784 ORTHO05D008508 1.0e-105 387.5 305 62.3
ClCG08G001730 Citrullus lanatus HOM05D006784 ORTHO05D008508 2.2e-105 386.3 299 63.5
Medtr3g006210 Medicago truncatula HOM05D006784 ORTHO05D008508 8.5e-105 384.4 293 60.8
QL09p001285 Quercus lobata HOM05D006784 ORTHO05D008508 3.2e-104 382.5 343 57.1
MBI03_g07138_MAGBIO Magnolia biondii HOM05D006784 ORTHO05D008508 5.5e-104 381.7 306 61.4
Nn5g27234 Nelumbo nucifera HOM05D006784 ORTHO05D008508 9.4e-104 380.9 301 65.4
Ciclev10021219m.g Citrus clementina HOM05D006784 ORTHO05D008508 3.6e-103 379.0 296 60.5
CsaV3_5G039470 Cucumis sativus L. HOM05D006784 ORTHO05D008508 1.4e-102 377.1 307 61.6
PSO761G0491 Papaver somniferum HOM05D006784 ORTHO05D008508 1.8e-102 376.7 300 60.0
Sc23g0000020 Simmondsia chinensis HOM05D006784 ORTHO05D008508 1.8e-102 376.7 287 63.1
MELO3C022124.2 Cucumis melo HOM05D006784 ORTHO05D008508 6.8e-102 374.8 313 60.7
PSO210G0863 Papaver somniferum HOM05D006784 ORTHO05D008508 6.8e-102 374.8 300 60.0
VMungo1080G0261 Vigna mungo HOM05D001255 ORTHO05D001246 1.5e-101 373.6 288 61.5
Glyma.04G110300 Glycine max HOM05D006784 ORTHO05D008508 2.0e-101 373.2 293 61.1
AL2G31000 Arabidopsis lyrata HOM05D006784 ORTHO05D008508 3.4e-101 372.5 304 59.5
Thhalv10019786m.g Eutrema salsugineum HOM05D006784 ORTHO05D008508 5.7e-101 371.7 322 57.1
Phvul.005G002500 Phaseolus vulgaris HOM05D006784 ORTHO05D008508 3.7e-100 369.0 286 61.2
Eucgr.F02928 Eucalyptus grandis HOM05D006784 ORTHO05D008508 4.8e-100 368.6 293 61.1
CARHR064620 Cardamine hirsuta HOM05D006784 ORTHO05D008508 2.4e-99 366.3 304 57.9
AT1G71340 Arabidopsis thaliana HOM05D006784 ORTHO05D008508 2.0e-98 363.2 308 57.8
ATR1089G080 Amborella trichopoda HOM05D006784 ORTHO05D008508 2.7e-98 362.8 303 60.4
EL10Ac1g01284 Beta vulgaris HOM05D006784 ORTHO05D008508 3.5e-98 362.5 294 58.5
BraA07t31326Z Brassica rapa HOM05D006784 ORTHO05D008508 3.5e-98 362.5 304 57.2
Carub.0002s1820 Capsella rubella HOM05D006784 ORTHO05D008508 3.5e-98 362.5 306 57.8
Sp5g26500 Schrenkiella parvula HOM05D006784 ORTHO05D008508 5.9e-98 361.7 304 55.9
arahy.Tifrunner.gnm1.ann1.9TUP5I Arachis hypogaea HOM05D006784 ORTHO05D008508 7.7e-98 361.3 293 58.4
FAN24G3159 Fragaria x ananassa HOM05D006784 ORTHO05D008508 7.7e-98 361.3 271 65.7
Hund26939 Selenicereus undatus HOM05D006784 ORTHO05D008508 7.7e-98 361.3 303 58.4
A07p37620 Brassica napus HOM05D006784 ORTHO05D008508 1.0e-97 360.9 304 57.2
Lj7A416T40 Lonicera japonica HOM05D006784 ORTHO05D008508 1.0e-97 360.9 283 62.5
arahy.Tifrunner.gnm1.ann1.VA03RP Arachis hypogaea HOM05D006784 ORTHO05D008508 2.9e-97 359.4 293 58.4
BcaB03g14890 Brassica carinata HOM05D006784 ORTHO05D008508 2.9e-97 359.4 299 58.2
Aa31LG4G9210 Aethionema arabicum HOM05D006784 ORTHO05D008508 8.6e-97 357.8 308 57.5
Glyma.06G323800 Glycine max HOM05D006784 ORTHO05D008508 3.3e-96 355.9 293 59.4
THA.LOC104809757 Tarenaya hassleriana HOM05D006784 ORTHO05D008508 7.2e-96 354.8 321 55.1
CAN.G567.5 Capsicum annuum HOM05D006784 ORTHO05D008508 2.8e-95 352.8 267 64.0
BolC6t39596H Brassica oleracea HOM05D006784 ORTHO05D008508 4.0e-94 349.0 294 57.5
BcaC08g46565 Brassica carinata HOM05D006784 ORTHO05D008508 2.0e-93 346.7 294 57.1
C06p45390 Brassica napus HOM05D006784 ORTHO05D008508 9.8e-93 344.4 294 56.5
unitig_46.g17979 Utricularia gibba HOM05D006784 ORTHO05D008508 1.7e-92 343.6 304 55.9
Gohir.A05G248533 Gossypium hirsutum HOM05D006784 ORTHO05D008508 8.3e-92 341.3 274 61.3
Nitab4.5_0000079g0180 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.8e-91 340.1 358 51.4
SEGI_09486 Sequoiadendron giganteum HOM05D006784 ORTHO05D008508 1.1e-88 330.9 324 51.2
TWI12G0477 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 5.6e-88 328.6 250 63.2
HPP92_019449 Vanilla planifolia HOM05D006784 ORTHO05D008508 1.4e-86 323.9 295 53.9
AUR62038543 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.8e-86 323.6 294 53.7
vmacro00953 Vaccinium macrocarpon HOM05D006784 ORTHO05D008508 1.3e-84 317.4 291 58.1
Duzib177G0427 Durio zibethinus HOM05D006784 ORTHO05D008508 4.9e-84 315.5 298 54.4
Lj3g0009982 Lotus japonicus HOM05D006784 ORTHO05D008508 4.9e-84 315.5 312 50.0
AUR62013392 Chenopodium quinoa HOM05D006784 ORTHO05D008508 1.4e-83 313.9 293 53.2
Nitab4.5_0001489g0040 Nicotiana tabacum HOM05D006784 ORTHO05D008508 1.1e-75 287.7 304 52.6
SGA_v2.0_scaffold118G32637 Striga asiatica HOM05D006784 ORTHO05D008508 1.4e-75 287.3 333 49.5
PGR119G1188 Punica granatum HOM05D006784 ORTHO05D008508 2.7e-74 283.1 333 45.6
Mapoly0041s0058 Marchantia polymorpha HOM05D006784 ORTHO05D008508 1.0e-73 281.2 300 46.3
CiPaw.03G012700 Carya illinoinensis HOM05D006784 ORTHO05D008508 3.5e-66 256.1 203 63.1
Prupe.8G003500 Prunus persica HOM05D006784 ORTHO05D008508 1.1e-64 251.1 211 60.2
Ca_13985_v3 Cicer arietinum L. HOM05D006784 ORTHO05D008508 7.3e-64 248.4 205 57.6
Solyc11g045040.2 Solanum lycopersicum HOM05D006784 ORTHO05D008508 1.4e-62 244.2 205 59.0
Aqoxy5G01860 Aquilegia oxysepala HOM05D006784 ORTHO05D008508 5.2e-62 242.3 205 56.1
Psat5g232280 Pisum sativum HOM05D006784 ORTHO05D008508 1.7e-60 237.3 210 55.7
Cpa.g.sc142.7 Carica papaya HOM05D006784 ORTHO05D008508 2.2e-60 236.9 270 50.4
CDE08G1443 Ceratophyllum demersum HOM05D006784 ORTHO05D008508 8.4e-60 235.0 241 53.9
FAN19G1248 Fragaria x ananassa HOM05D006784 ORTHO05D008508 8.4e-60 235.0 251 52.6
Gohir.D05G250801 Gossypium hirsutum HOM05D006784 ORTHO05D008508 6.0e-58 228.8 202 57.9
AagrBONN_evm.TU.Sc2ySwM_344.2721 Anthoceros agrestis HOM05D006784 ORTHO05D008508 7.6e-53 211.8 305 37.7
TWI12G0001 Tripterygium wilfordii HOM05D006784 ORTHO05D008508 1.3e-44 184.5 290 37.9
Ah.05g170450 Amaranthus hybridus HOM05D006784 ORTHO05D008508 2.4e-43 180.3 284 36.3
Peaxi162Scf00078g01023 Petunia axillaris HOM05D006784 ORTHO05D008508 3.9e-41 172.9 144 60.4
Zm00001eb167850 Zea mays HOM05D006784 ORTHO05D008508 6.2e-39 165.6 211 42.7
Haze_14004 Corylus avellana HOM05D006784 ORTHO05D008508 6.9e-38 162.2 314 35.0
COL.COLO4_25079 Corchorus olitorius HOM05D006784 ORTHO05D008508 2.6e-37 160.2 122 63.1
PGSC0003DMG401006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 1.3e-33 147.9 101 71.3
Cre02.g115750 Chlamydomonas reinhardtii HOM05D006784 ORTHO05D008508 6.7e-33 145.6 288 32.3
Hma1.2p1_0238F.1_g099740 Hydrangea macrophylla HOM05D006784 ORTHO05D008508 7.4e-32 142.1 110 62.7
FAN20G3191 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.8e-31 139.4 118 58.5
HPP92_019452 Vanilla planifolia HOM05D006784 ORTHO05D008508 5.3e-30 136.0 126 51.6
Peaxi162Scf00078g01017 Petunia axillaris HOM05D006784 ORTHO05D008508 5.8e-29 132.5 96 67.7
Os11g0236000 Oryza sativa ssp. japonica HOM05D006784 ORTHO05D008508 1.0e-25 121.7 80 57.5
PGSC0003DMG402006664 Solanum tuberosum HOM05D006784 ORTHO05D008508 2.3e-25 120.6 91 64.8
MCO03G046 Micromonas commoda HOM05D006784 ORTHO05D008508 5.1e-25 119.4 280 29.6
Gorai.005G166200 Gossypium raimondii HOM05D006784 ORTHO05D008508 4.1e-22 109.8 85 61.2
FvH4_2g04920 Fragaria vesca HOM05D006784 ORTHO05D008508 1.2e-21 108.2 183 40.4
Gohir.D08G237350 Gossypium hirsutum HOM05D006784 ORTHO05D008508 1.2e-21 108.2 85 60.0
CBR_g18896 Chara braunii HOM05D006784 ORTHO05D008508 2.0e-21 107.5 141 38.3
MD05G1006200 Malus domestica HOM05D006784 ORTHO05D008508 2.2e-20 104.0 79 57.0
Atru.chr7.394 Acer truncatum HOM05D006784 ORTHO05D008508 3.9e-17 93.2 65 63.1
QL09p001297 Quercus lobata HOM05D006784 ORTHO05D008508 3.7e-15 86.7 62 53.2
Gorai.004G102800 Gossypium raimondii HOM05D006784 ORTHO05D008508 6.7e-09 65.9 49 59.2
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 3.3e-08 63.5 224 27.7
FvH4_2g01030 Fragaria vesca HOM05D006784 ORTHO05D005195 4.8e-07 59.7 141 32.6
FAN20G2921 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.8e-07 59.7 157 31.8
FAN20G2925 Fragaria x ananassa HOM05D006784 ORTHO05D008508 4.8e-07 59.7 157 31.8
FAN24G0543 Fragaria x ananassa HOM05D006784 ORTHO05D008508 2.4e-06 57.4 157 31.2


User provided reference genes

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