Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0266201 Helianthus annuus HOM05D000062 ORTHO05D221718 6.3e-88 327.4 166 100.0
HanXRQChr06g0170921 Helianthus annuus HOM05D000062 ORTHO05D006089 1.8e-18 96.7 104 56.7
HanXRQChr17g0541391 Helianthus annuus HOM05D000062 ORTHO05D006089 4.6e-14 82.0 104 47.1
ECA246G4505 Erigeron canadensis HOM05D000062 ORTHO05D006089 3.0e-13 79.3 104 49.0
SGA_v2.0_scaffold159G37541 Striga asiatica HOM05D000062 ORTHO05D006089 1.8e-10 70.1 104 42.3
Rhsim12G0014100 Rhododendron simsii HOM05D000062 ORTHO05D006089 4.1e-10 68.9 104 38.5
Peaxi162Scf00833g00535 Petunia axillaris HOM05D000062 ORTHO05D006089 6.9e-10 68.2 104 40.4
Actinidia12518 Actinidia chinensis HOM05D000062 ORTHO05D006089 4.5e-09 65.5 103 39.8
Glyma.20G065900 Glycine max HOM05D000062 ORTHO05D006089 4.5e-09 65.5 104 39.4
MSTRG.14110 Avicennia marina HOM05D000062 ORTHO05D006089 1.0e-08 64.3 101 41.6
Migut.H01267 Erythranthe guttata HOM05D000062 ORTHO05D006089 1.3e-08 63.9 104 39.4
Lsat_1_v5_gn_3_36561 Lactuca sativa HOM05D000062 ORTHO05D006089 1.3e-08 63.9 93 43.0
Actinidia31600 Actinidia chinensis HOM05D000062 ORTHO05D006089 2.2e-08 63.2 103 38.8
CAN.G819.6 Capsicum annuum HOM05D000062 ORTHO05D006089 2.2e-08 63.2 104 38.5
Ca_16307_v3 Cicer arietinum L. HOM05D000062 ORTHO05D006089 2.2e-08 63.2 104 37.5
Phvul.006G001600 Phaseolus vulgaris HOM05D000062 ORTHO05D006089 2.2e-08 63.2 104 38.5
Potri.016G019800 Populus trichocarpa HOM05D000062 ORTHO05D006089 2.2e-08 63.2 104 39.4
Aqoxy1G01454 Aquilegia oxysepala HOM05D000062 ORTHO05D006089 3.8e-08 62.4 104 35.6
Dinv17737 Davidia involucrata HOM05D000062 ORTHO05D006089 3.8e-08 62.4 104 38.5
PGSC0003DMG400015920 Solanum tuberosum HOM05D000062 ORTHO05D006089 3.8e-08 62.4 104 37.5
CSS0015117 Camellia sinensis var. sinensis HOM05D000062 ORTHO05D006089 5.0e-08 62.0 102 38.2
Glyma.13G003700 Glycine max HOM05D000062 ORTHO05D006089 5.0e-08 62.0 104 38.5
Nitab4.5_0008439g0040 Nicotiana tabacum HOM05D000062 ORTHO05D006089 5.0e-08 62.0 104 36.5
Oeu022922.1 Olea europaea HOM05D000062 ORTHO05D006089 5.0e-08 62.0 104 37.5
Hund09663 Selenicereus undatus HOM05D000062 ORTHO05D006089 5.0e-08 62.0 103 38.8
Solyc07g043560.4 Solanum lycopersicum HOM05D000062 ORTHO05D006089 6.5e-08 61.6 104 37.5
CANSAT64G0637 Cannabis sativa HOM05D000062 ORTHO05D006089 1.1e-07 60.8 104 39.4
Medtr3g081170 Medicago truncatula HOM05D000062 ORTHO05D006089 1.1e-07 60.8 104 38.5
Sopen07g023120 Solanum pennellii HOM05D000062 ORTHO05D006089 1.1e-07 60.8 104 36.5
TPR.G33600 Trifolium pratense HOM05D000062 ORTHO05D006089 1.1e-07 60.8 103 36.9
Potri.006G022100 Populus trichocarpa HOM05D000062 ORTHO05D006089 1.9e-07 60.1 103 40.8
GSVIVG01038380001 Vitis vinifera HOM05D000062 ORTHO05D006089 1.9e-07 60.1 104 35.6
Sabra16G0021700 Salix brachista HOM05D001005 ORTHO05D006089 3.2e-07 59.3 104 38.5
Sabra16G0026400 Salix brachista HOM05D001005 ORTHO05D006089 3.2e-07 59.3 104 38.5
AUR62024598 Chenopodium quinoa HOM05D000062 ORTHO05D006089 4.2e-07 58.9 105 37.1
GSVIVG01035736001 Vitis vinifera HOM05D000062 ORTHO05D006089 4.2e-07 58.9 104 35.6
AUR62011754 Chenopodium quinoa HOM05D000062 ORTHO05D006089 5.5e-07 58.5 105 38.1
Lalb_Chr22g0360831 Lupinus albus HOM05D000062 ORTHO05D006089 5.5e-07 58.5 104 37.5
unitig_26.g9919 Utricularia gibba HOM05D000062 ORTHO05D006089 5.5e-07 58.5 102 35.3
Lalb_Chr24g0402841 Lupinus albus HOM05D000062 ORTHO05D006089 7.2e-07 58.2 103 37.9
Sabra06G0016000 Salix brachista HOM05D000062 ORTHO05D006089 7.2e-07 58.2 103 37.9
Nitab4.5_0001843g0090 Nicotiana tabacum HOM05D000062 ORTHO05D006089 9.4e-07 57.8 104 34.6
Ciclev10011017m.g Citrus clementina HOM05D000062 ORTHO05D006089 1.2e-06 57.4 104 35.6
Lj6g0023196 Lotus japonicus HOM05D000062 ORTHO05D006089 1.2e-06 57.4 104 36.5
THA.LOC104815497 Tarenaya hassleriana HOM05D000062 ORTHO05D006089 1.2e-06 57.4 104 35.6
TWI60G1018 Tripterygium wilfordii HOM05D000062 ORTHO05D006089 1.2e-06 57.4 104 35.6
CDE12G0959 Ceratophyllum demersum HOM05D000062 ORTHO05D006089 1.6e-06 57.0 103 35.9
GSVIVG01026352001 Vitis vinifera HOM05D000062 ORTHO05D006089 1.6e-06 57.0 104 34.6
MD17G1127600 Malus domestica HOM05D000062 ORTHO05D006089 2.1e-06 56.6 104 36.5
Prupe.3G187600 Prunus persica HOM05D000062 ORTHO05D006089 2.1e-06 56.6 104 37.5
FvH4_6g39720 Fragaria vesca HOM05D000062 ORTHO05D006089 2.7e-06 56.2 104 36.5
FAN05G3788 Fragaria x ananassa HOM05D000062 ORTHO05D006089 2.7e-06 56.2 104 37.5
FAN09G3136 Fragaria x ananassa HOM05D000062 ORTHO05D006089 2.7e-06 56.2 104 37.5
FAN14G1066 Fragaria x ananassa HOM05D000062 ORTHO05D006089 2.7e-06 56.2 104 37.5
FAN14G5920 Fragaria x ananassa HOM05D000062 ORTHO05D006089 2.7e-06 56.2 104 37.5
CiPaw.08G183200 Carya illinoinensis HOM05D000062 ORTHO05D006089 4.7e-06 55.5 104 36.5
DCAR_013333 Daucus carota HOM05D000062 ORTHO05D006089 4.7e-06 55.5 107 35.5
Atru.chr8.953 Acer truncatum HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 34.6
Cfa014184 Carpinus fangiana HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 35.6
DCAR_009834 Daucus carota HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 33.7
DCAR_009836 Daucus carota HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 33.7
Eucgr.C01277 Eucalyptus grandis HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 39.4
VMungo1383G2414 Vigna mungo HOM05D000062 ORTHO05D006089 6.1e-06 55.1 104 35.6
CDE04G3723 Ceratophyllum demersum HOM05D000062 ORTHO05D006089 7.9e-06 54.7 103 34.0
FAN02G1751 Fragaria x ananassa HOM05D000062 ORTHO05D006089 7.9e-06 54.7 104 36.5
MD09G1137300 Malus domestica HOM05D000062 ORTHO05D006089 7.9e-06 54.7 104 34.6


User provided reference genes

Program Settings