Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0266141 Helianthus annuus HOM05D001558 ORTHO05D003061 5.8e-25 116.7 57 100.0
HanXRQChr14g0438011 Helianthus annuus HOM05D001558 ORTHO05D003061 2.5e-12 74.7 51 72.5
Lsat_1_v5_gn_2_59301 Lactuca sativa HOM05D001558 ORTHO05D003061 7.4e-12 73.2 51 72.5
ECA238G0305 Erigeron canadensis HOM05D001558 ORTHO05D003061 1.3e-11 72.4 48 75.0
Lj1A257T27 Lonicera japonica HOM05D001558 ORTHO05D003061 1.1e-10 69.3 51 64.7
DCAR_010334 Daucus carota HOM05D001558 ORTHO05D003061 1.5e-09 65.5 51 62.7
Oeu035572.1 Olea europaea HOM05D001558 ORTHO05D003061 3.4e-09 64.3 53 64.2
CSS0031917 Camellia sinensis var. sinensis HOM05D001558 ORTHO05D003061 4.5e-09 63.9 48 62.5
CSS0037903 Camellia sinensis var. sinensis HOM05D001558 ORTHO05D003061 4.5e-09 63.9 48 62.5
Oeu031469.1 Olea europaea HOM05D001558 ORTHO05D003061 7.7e-09 63.2 53 62.3
MSTRG.12376 Avicennia marina HOM05D001558 ORTHO05D003061 1.0e-08 62.8 53 64.2
Actinidia07255 Actinidia chinensis HOM05D001558 ORTHO05D003061 1.3e-08 62.4 51 58.8
Actinidia24226 Actinidia chinensis HOM05D001558 ORTHO05D003061 1.7e-08 62.0 51 60.8
Actinidia25114 Actinidia chinensis HOM05D001558 ORTHO05D003061 1.7e-08 62.0 51 60.8
CSS0001627 Camellia sinensis var. sinensis HOM05D001558 ORTHO05D003061 2.9e-08 61.2 51 56.9
Migut.N02477 Erythranthe guttata HOM05D001558 ORTHO05D003061 3.8e-08 60.8 53 60.4
Hma1.2p1_0587F.1_g184000 Hydrangea macrophylla HOM05D001558 ORTHO05D003061 8.5e-08 59.7 51 60.8
Rhsim13G0113300 Rhododendron simsii HOM05D001558 ORTHO05D003061 1.1e-07 59.3 51 64.7
vmacro03326 Vaccinium macrocarpon HOM05D001558 ORTHO05D003061 2.5e-07 58.2 51 58.8
Nitab4.5_0000731g0050 Nicotiana tabacum HOM05D001558 ORTHO05D003061 3.2e-07 57.8 50 62.0
Nitab4.5_0008177g0010 Nicotiana tabacum HOM05D001558 ORTHO05D003061 3.2e-07 57.8 50 62.0
Eucgr.B03829 Eucalyptus grandis HOM05D001558 ORTHO05D003061 5.5e-07 57.0 51 58.8
CAN.G745.8 Capsicum annuum HOM05D001558 ORTHO05D003061 1.6e-06 55.5 50 58.0
Hund18771 Selenicereus undatus HOM05D001558 ORTHO05D003061 1.6e-06 55.5 51 56.9
COL.COLO4_34012 Corchorus olitorius HOM05D001558 ORTHO05D003061 2.1e-06 55.1 48 56.2
Solyc11g068650.2 Solanum lycopersicum HOM05D001558 ORTHO05D003061 2.1e-06 55.1 50 58.0
Sopen11g027370 Solanum pennellii HOM05D001558 ORTHO05D003061 2.1e-06 55.1 50 58.0
Peaxi162Scf00224g00119 Petunia axillaris HOM05D001558 ORTHO05D003061 2.7e-06 54.7 50 58.0
RcHm_v2.0_Chr5g0046541 Rosa chinensis HOM05D001558 ORTHO05D003061 2.7e-06 54.7 51 56.9
CANSAT54G1061 Cannabis sativa HOM05D001558 ORTHO05D003061 3.6e-06 54.3 52 57.7
AUR62006468 Chenopodium quinoa HOM05D001558 ORTHO05D003061 3.6e-06 54.3 51 54.9
AUR62029824 Chenopodium quinoa HOM05D001558 ORTHO05D003061 3.6e-06 54.3 51 54.9
EL10Ac7g16332 Beta vulgaris HOM05D001558 ORTHO05D003061 4.7e-06 53.9 51 54.9
Ah.08g223510 Amaranthus hybridus HOM05D001558 ORTHO05D003061 6.1e-06 53.5 51 52.9
Cpa.g.sc195.17 Carica papaya HOM05D001558 ORTHO05D003061 6.1e-06 53.5 51 52.9
Thecc.09G279400 Theobroma cacao HOM05D001558 ORTHO05D003061 6.1e-06 53.5 51 54.9


User provided reference genes

Program Settings