Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 1.0e-35 152.9 78 100.0
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 4.4e-31 137.5 78 89.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 7.7e-28 126.7 79 84.8
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 1.7e-27 125.6 76 82.9
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.9e-27 124.8 79 83.5
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 3.8e-27 124.4 79 83.5
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 1.1e-26 122.9 75 84.0
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 3.2e-26 121.3 79 81.0
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 3.2e-26 121.3 73 82.2
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 4.2e-26 120.9 75 84.0
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 7.2e-26 120.2 73 82.2
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 9.4e-26 119.8 73 82.2
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 9.4e-26 119.8 73 80.8
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 1.2e-25 119.4 73 79.5
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 1.2e-25 119.4 79 81.0
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 2.7e-25 118.2 71 83.1
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 2.7e-25 118.2 72 81.9
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 2.7e-25 118.2 75 77.3
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 3.6e-25 117.9 74 78.4
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 3.6e-25 117.9 74 78.4
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 3.6e-25 117.9 74 78.4
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 3.6e-25 117.9 74 78.4
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 3.6e-25 117.9 74 78.4
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 3.6e-25 117.9 72 81.9
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 4.7e-25 117.5 73 78.1
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 4.7e-25 117.5 71 83.1
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 6.1e-25 117.1 71 83.1
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 8.0e-25 116.7 73 79.5
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 8.0e-25 116.7 75 76.0
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 8.0e-25 116.7 73 79.5
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 8.0e-25 116.7 73 79.5
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 1.0e-24 116.3 74 77.0
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 1.0e-24 116.3 79 77.2
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.0e-24 116.3 76 80.3
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-24 116.3 73 78.1
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 1.0e-24 116.3 73 78.1
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.0e-24 116.3 73 79.5
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 1.0e-24 116.3 72 79.2
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.4e-24 115.9 71 80.3
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 1.4e-24 115.9 71 80.3
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 1.4e-24 115.9 71 80.3
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 1.4e-24 115.9 72 79.2
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.8e-24 115.5 79 77.2
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.8e-24 115.5 71 81.7
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.3e-24 115.2 73 79.5
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 2.3e-24 115.2 71 78.9
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 2.3e-24 115.2 71 80.3
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 2.3e-24 115.2 77 76.6
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 3.0e-24 114.8 75 76.0
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 4.0e-24 114.4 71 81.7
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 5.2e-24 114.0 102 66.7
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 5.2e-24 114.0 76 77.6
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 6.8e-24 113.6 69 81.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 6.8e-24 113.6 71 81.7
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 6.8e-24 113.6 73 76.7
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 8.8e-24 113.2 71 78.9
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 8.8e-24 113.2 71 80.3
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 8.8e-24 113.2 71 80.3
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 8.8e-24 113.2 71 80.3
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 8.8e-24 113.2 69 81.2
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.2e-23 112.8 72 76.4
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.2e-23 112.8 74 75.7
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 1.5e-23 112.5 75 76.0
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.0e-23 112.1 74 79.7
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 2.0e-23 112.1 76 77.6
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 2.0e-23 112.1 71 80.3
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 2.0e-23 112.1 71 80.3
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 2.0e-23 112.1 71 78.9
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.4e-23 111.3 73 75.3
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 4.4e-23 110.9 71 76.1
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 4.4e-23 110.9 63 88.9
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 4.4e-23 110.9 72 75.0
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 4.4e-23 110.9 72 75.0
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 4.4e-23 110.9 63 88.9
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 7.5e-23 110.2 71 77.5
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 9.8e-23 109.8 72 73.6
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 1.3e-22 109.4 73 74.0
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.3e-22 109.4 85 69.4
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 1.3e-22 109.4 75 73.3
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 2.2e-22 108.6 76 75.0
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 2.2e-22 108.6 72 75.0
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 2.8e-22 108.2 72 72.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 8.3e-22 106.7 73 72.6
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.1e-21 106.3 71 76.1
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.4e-21 105.9 70 75.7
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.8e-21 105.5 74 70.3
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 1.8e-21 105.5 74 70.3
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.8e-21 105.5 81 69.1
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.0e-20 102.1 63 79.4
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 3.5e-20 101.3 62 83.9
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.7e-19 99.0 63 77.8
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 3.8e-19 97.8 89 62.9
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 5.0e-19 97.4 63 74.6
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 4.2e-18 94.4 69 66.7
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 9.5e-18 93.2 64 71.9
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 1.6e-17 92.4 60 81.7
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 2.1e-17 92.0 71 69.0
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.1e-17 92.0 70 61.4
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.8e-17 91.7 57 77.2
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 6.1e-17 90.5 54 83.3
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 6.8e-16 87.0 55 83.6
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 8.9e-16 86.7 51 86.3
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.2e-15 86.3 53 86.8
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 1.2e-15 86.3 53 81.1
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 2.6e-15 85.1 69 63.8
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 7.5e-15 83.6 50 86.0
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 2.9e-14 81.6 51 82.4
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 4.9e-14 80.9 54 77.8
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 1.8e-13 79.0 82 56.1
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.0e-12 75.5 68 55.9
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.7e-12 75.1 62 66.1
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 5.9e-12 73.9 64 64.1
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.9e-11 71.6 54 68.5
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 8.6e-11 70.1 64 60.9
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.9e-10 68.9 69 50.7
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 2.0e-07 58.9 38 81.6
HPP92_016979 Vanilla planifolia HOM05D006711 ORTHO05D008104 3.4e-07 58.2 36 77.8
Nn3g16941 Nelumbo nucifera HOM05D006711 ORTHO05D008104 7.5e-07 57.0 51 56.9
SHI34267 Sapria himalayana HOM05D006711 ORTHO05D008104 4.9e-06 54.3 34 82.4


User provided reference genes

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