Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 4.7e-222 774.2 395 100.0
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 1.8e-173 612.8 413 77.7
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 1.0e-160 570.5 423 72.1
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 7.4e-151 537.7 361 72.9
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 2.8e-150 535.8 355 76.6
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 8.1e-150 534.3 418 67.9
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.4e-149 533.5 355 74.1
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 1.8e-149 533.1 374 72.2
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 1.8e-149 533.1 370 71.6
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 6.9e-149 531.2 382 70.4
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.0e-148 529.6 374 71.7
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 2.0e-148 529.6 365 72.6
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 3.4e-148 528.9 375 70.7
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 1.7e-147 526.6 353 75.1
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 1.9e-146 523.1 371 71.2
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 1.9e-146 523.1 354 73.7
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 3.2e-146 522.3 365 72.1
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.5e-146 521.5 374 71.4
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 7.1e-146 521.2 351 74.1
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 9.3e-146 520.8 370 69.5
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 7.9e-145 517.7 354 72.9
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 2.3e-144 516.2 363 71.3
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 1.1e-143 513.8 359 71.6
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 1.5e-143 513.5 370 70.5
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 1.5e-143 513.5 365 70.7
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 3.3e-143 512.3 364 70.9
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 4.3e-143 511.9 365 70.4
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 5.6e-143 511.5 365 71.0
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 7.4e-143 511.1 391 68.3
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 9.6e-143 510.8 368 68.8
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 1.6e-142 510.0 355 71.5
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 3.7e-142 508.8 361 70.1
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 6.2e-142 508.1 359 71.0
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 1.1e-141 507.3 355 71.3
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.4e-141 506.9 393 67.7
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 3.1e-141 505.8 360 70.6
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 9.0e-141 504.2 363 68.9
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.5e-140 503.4 388 67.0
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 2.0e-140 503.1 396 64.9
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 5.8e-140 501.5 351 71.8
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 7.6e-140 501.1 364 69.8
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 4.9e-139 498.4 376 66.8
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 1.4e-138 496.9 385 64.7
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 3.2e-138 495.7 354 70.6
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 5.5e-138 495.0 353 69.7
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 5.5e-138 495.0 383 66.1
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 5.5e-138 495.0 381 66.4
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 7.1e-138 494.6 359 68.0
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 1.2e-137 493.8 370 67.3
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 2.7e-137 492.7 355 67.0
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 6.0e-137 491.5 359 67.7
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 6.0e-137 491.5 355 66.8
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 1.0e-136 490.7 355 66.8
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 1.3e-136 490.3 363 69.1
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 1.8e-136 490.0 375 63.5
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.8e-136 490.0 374 66.0
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.8e-136 490.0 354 66.9
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 3.0e-136 489.2 355 66.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 3.0e-136 489.2 342 70.8
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 3.9e-136 488.8 379 63.9
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 3.9e-136 488.8 379 63.9
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 5.1e-136 488.4 382 64.1
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 6.7e-136 488.0 338 71.9
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 8.7e-136 487.6 383 64.5
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.5e-135 486.9 362 69.9
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 1.5e-135 486.9 422 62.1
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 1.5e-135 486.9 393 63.6
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 3.3e-135 485.7 355 66.2
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.3e-135 485.3 352 69.6
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 5.7e-135 485.0 359 66.3
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 9.7e-135 484.2 363 68.9
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 4.8e-134 481.9 338 70.1
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 6.3e-134 481.5 407 59.7
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 6.3e-134 481.5 354 68.9
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 2.4e-133 479.6 367 67.3
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 1.2e-132 477.2 367 68.4
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 1.2e-132 477.2 388 64.9
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 2.0e-132 476.5 361 68.4
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 1.0e-131 474.2 348 68.7
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 1.3e-131 473.8 353 68.8
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 8.5e-131 471.1 394 61.2
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.1e-130 470.7 355 69.3
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 1.2e-129 467.2 380 64.2
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 4.6e-129 465.3 329 70.5
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 1.0e-128 464.2 353 68.8
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 1.3e-126 457.2 353 64.3
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 5.3e-125 451.8 380 60.3
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 5.0e-123 445.3 314 69.1
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 8.5e-123 444.5 397 61.7
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 3.2e-122 442.6 324 67.6
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 2.2e-115 419.9 321 64.2
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 1.9e-114 416.8 273 72.5
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 5.5e-114 415.2 315 67.0
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 4.1e-109 399.1 355 55.2
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 5.9e-108 395.2 350 54.0
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.0e-104 384.4 355 52.7
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 1.1e-98 364.4 355 51.3
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 3.7e-86 322.8 252 60.7
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 7.8e-84 315.1 382 46.1
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 2.5e-82 310.1 266 59.8
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 5.6e-82 308.9 389 48.1
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 7.5e-79 298.5 258 61.2
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 8.3e-78 295.0 186 76.3
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 4.3e-74 282.7 185 77.8
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.1e-69 266.2 419 38.4
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 4.1e-69 266.2 419 38.4
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 5.4e-69 265.8 184 66.8
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 1.6e-68 264.2 366 42.3
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 7.8e-68 261.9 451 36.4
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 2.8e-57 226.9 520 29.4
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 1.1e-56 224.9 209 53.6
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 3.1e-56 223.4 343 40.8
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 8.4e-54 215.3 143 74.1
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 3.1e-48 196.8 133 73.7
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 5.8e-47 192.6 361 35.7
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 3.3e-42 176.8 162 57.4
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 1.1e-18 98.6 68 72.1
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 3.7e-17 93.6 170 35.9
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 6.3e-17 92.8 68 67.6
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 6.3e-17 92.8 68 67.6
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.4e-16 90.9 71 64.8
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 9.0e-16 89.0 170 32.4
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 1.0e-14 85.5 58 67.2
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.2e-14 84.3 169 32.0
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 2.7e-12 77.4 53 77.4
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 7.9e-12 75.9 171 31.0
SEGI_18941 Sequoiadendron giganteum HOM05D006074 ORTHO05D026256 8.5e-06 55.8 49 65.3


User provided reference genes

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