Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0264921 Helianthus annuus HOM05D007258 ORTHO05D008852 1.6e-109 399.4 198 100.0
Lsat_1_v5_gn_4_173160 Lactuca sativa HOM05D007258 ORTHO05D008852 5.8e-96 354.4 195 90.3
ECA232G3790 Erigeron canadensis HOM05D007258 ORTHO05D008852 7.6e-88 327.4 195 83.1
Hma1.2p1_0069F.1_g037420 Hydrangea macrophylla HOM05D007258 ORTHO05D008852 4.0e-73 278.5 190 71.1
Nitab4.5_0009044g0050 Nicotiana tabacum HOM05D007258 ORTHO05D008852 6.9e-73 277.7 193 72.0
CAN.G497.87 Capsicum annuum HOM05D007258 ORTHO05D008852 2.6e-72 275.8 179 74.9
SGA_v2.0_scaffold148G36428 Striga asiatica HOM05D003455 ORTHO05D004165 3.8e-71 271.9 194 69.1
Rhsim08G0075900 Rhododendron simsii HOM05D007258 ORTHO05D008852 1.9e-70 269.6 190 71.1
Nn4g23475 Nelumbo nucifera HOM05D007258 ORTHO05D008852 9.3e-70 267.3 190 67.9
CSS0017666 Camellia sinensis var. sinensis HOM05D007258 ORTHO05D008852 1.0e-68 263.8 195 69.2
THA.LOC104802980 Tarenaya hassleriana HOM05D007258 ORTHO05D008852 2.3e-68 262.7 175 72.6
Sopen02g033890 Solanum pennellii HOM05D007258 ORTHO05D008852 3.0e-68 262.3 180 70.6
PGSC0003DMG400001370 Solanum tuberosum HOM05D007258 ORTHO05D008852 3.9e-68 261.9 181 71.8
Manes.02G057800 Manihot esculenta HOM05D007258 ORTHO05D008852 8.7e-68 260.8 175 72.0
Lalb_Chr21g0318311 Lupinus albus HOM05D007258 ORTHO05D008852 1.9e-67 259.6 189 69.8
Solyc02g089100.3 Solanum lycopersicum HOM05D007258 ORTHO05D008852 5.6e-67 258.1 171 73.1
Psat1g066400 Pisum sativum HOM05D007258 ORTHO05D008852 7.4e-67 257.7 177 74.0
TPR.G4313 Trifolium pratense HOM05D007258 ORTHO05D008852 7.4e-67 257.7 202 67.3
Haze_25378 Corylus avellana HOM05D007258 ORTHO05D008852 1.6e-66 256.5 177 70.1
Cpa.g.sc14.201 Carica papaya HOM05D007258 ORTHO05D008852 2.8e-66 255.8 186 67.2
Ciclev10012686m.g Citrus clementina HOM05D007258 ORTHO05D008852 2.8e-66 255.8 189 66.1
Ca_20770_v3 Cicer arietinum L. HOM05D000600 ORTHO05D000432 4.8e-66 255.0 160 76.9
Medtr6g015855 Medicago truncatula HOM05D007258 ORTHO05D008852 4.8e-66 255.0 195 66.2
Potri.004G116800 Populus trichocarpa HOM05D007258 ORTHO05D008852 6.2e-66 254.6 197 64.0
Glyma.13G053500 Glycine max HOM05D007258 ORTHO05D008852 8.1e-66 254.2 198 67.2
unitig_32.g11768 Utricularia gibba HOM05D007258 ORTHO05D008852 1.8e-65 253.1 191 65.4
Sabra04G0070300 Salix brachista HOM05D000830 ORTHO05D008852 2.4e-65 252.7 176 69.3
CiPaw.03G085000 Carya illinoinensis HOM05D007258 ORTHO05D008852 4.0e-65 251.9 185 68.1
Lj2g0017705 Lotus japonicus HOM05D007258 ORTHO05D008852 4.0e-65 251.9 187 69.5
VMungo0464G1058 Vigna mungo HOM05D007258 ORTHO05D008852 5.3e-65 251.5 177 69.5
CANSAT64G1331 Cannabis sativa HOM05D007258 ORTHO05D008852 6.9e-65 251.1 190 65.3
arahy.Tifrunner.gnm1.ann1.GI8EHX Arachis hypogaea HOM05D007258 ORTHO05D008852 3.4e-64 248.8 195 65.6
arahy.Tifrunner.gnm1.ann1.TJ02B2 Arachis hypogaea HOM05D007258 ORTHO05D008852 5.8e-64 248.1 195 65.6
Cc07_g04400 Coffea canephora HOM05D007258 ORTHO05D008852 1.0e-63 247.3 194 62.4
PGR004G1744 Punica granatum HOM05D007258 ORTHO05D008852 1.0e-63 247.3 171 70.2
QL02p066408 Quercus lobata HOM05D007258 ORTHO05D008852 2.2e-63 246.1 185 65.9
MSTRG.15441 Avicennia marina HOM05D007258 ORTHO05D008852 2.9e-63 245.7 195 64.1
Glyma.19G033200 Glycine max HOM05D007258 ORTHO05D008852 2.9e-63 245.7 165 71.5
Phvul.004G041100 Phaseolus vulgaris HOM05D007258 ORTHO05D008852 2.9e-63 245.7 201 64.2
Migut.K01261 Erythranthe guttata HOM05D007258 ORTHO05D008852 6.5e-63 244.6 194 63.4
Prupe.3G250800 Prunus persica HOM05D007258 ORTHO05D008852 6.5e-63 244.6 172 69.8
Aqoxy3G00517 Aquilegia oxysepala HOM05D007258 ORTHO05D008852 1.9e-62 243.0 193 64.2
MELO3C022042.2 Cucumis melo HOM05D007258 ORTHO05D008852 1.9e-62 243.0 185 65.9
AUR62009496 Chenopodium quinoa HOM05D007258 ORTHO05D008852 7.1e-62 241.1 191 62.3
CsaV3_5G038620 Cucumis sativus L. HOM05D007258 ORTHO05D008852 7.1e-62 241.1 183 65.6
MD17G1063700 Malus domestica HOM05D007258 ORTHO05D008852 9.3e-62 240.7 189 65.1
Sc11g0008720 Simmondsia chinensis HOM05D007258 ORTHO05D008852 1.2e-61 240.4 178 66.9
HPP92_001847 Vanilla planifolia HOM05D007258 ORTHO05D008852 1.2e-61 240.4 147 76.2
Duzib138G1000 Durio zibethinus HOM05D007258 ORTHO05D008852 1.6e-61 240.0 177 66.1
Thecc.04G103600 Theobroma cacao HOM05D007258 ORTHO05D008852 2.7e-61 239.2 193 62.2
Gohir.D07G187600 Gossypium hirsutum HOM05D007258 ORTHO05D008852 4.6e-61 238.4 178 64.6
RcHm_v2.0_Chr2g0165201 Rosa chinensis HOM05D007258 ORTHO05D008852 6.0e-61 238.0 175 68.6
Gorai.001G208500 Gossypium raimondii HOM05D007258 ORTHO05D008852 1.0e-60 237.3 178 64.6
GSVIVG01036568001 Vitis vinifera HOM05D007258 ORTHO05D008852 1.8e-60 236.5 182 64.8
CARHR076190 Cardamine hirsuta HOM05D007258 ORTHO05D008852 1.5e-59 233.4 172 67.4
BcaC05g30334 Brassica carinata HOM05D007258 ORTHO05D008852 1.9e-59 233.0 171 67.8
MD17G1063100 Malus domestica HOM05D007258 ORTHO05D008852 1.9e-59 233.0 182 65.4
Aa31LG5G12750 Aethionema arabicum HOM05D007258 ORTHO05D008852 3.3e-59 232.3 201 60.7
Sed0003620 Sechium edule HOM05D007258 ORTHO05D008852 4.3e-59 231.9 191 64.4
Hund16216 Selenicereus undatus HOM05D007258 ORTHO05D008852 5.7e-59 231.5 178 67.4
TWI34G1392 Tripterygium wilfordii HOM05D007258 ORTHO05D008852 2.1e-58 229.6 188 63.3
FvH4_6g46551 Fragaria vesca HOM05D007258 ORTHO05D008852 2.8e-58 229.2 175 67.4
FAN05G4223 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.8e-58 229.2 175 67.4
Sp3g01290 Schrenkiella parvula HOM05D007258 ORTHO05D008852 2.8e-58 229.2 205 60.0
BcaC05g30335 Brassica carinata HOM05D007258 ORTHO05D008852 3.7e-58 228.8 171 67.3
A05p45100 Brassica napus HOM05D007258 ORTHO05D008852 3.7e-58 228.8 171 67.3
C09p75600 Brassica napus HOM05D007258 ORTHO05D008852 3.7e-58 228.8 171 67.3
BolC5t35098H Brassica oleracea HOM05D007258 ORTHO05D008852 3.7e-58 228.8 171 67.3
COL.COLO4_03895 Corchorus olitorius HOM05D007258 ORTHO05D008852 3.7e-58 228.8 136 75.7
Thhalv10021265m.g Eutrema salsugineum HOM05D007258 ORTHO05D008852 3.7e-58 228.8 171 66.7
BraA05t23151Z Brassica rapa HOM05D007258 ORTHO05D008852 1.1e-57 227.3 201 60.2
Oeu004419.1 Olea europaea HOM05D007258 ORTHO05D008852 1.1e-57 227.3 141 73.0
Carub.0003s0134 Capsella rubella HOM05D007258 ORTHO05D008852 1.4e-57 226.9 171 66.7
PSO478G0672 Papaver somniferum HOM05D007258 ORTHO05D008852 1.4e-57 226.9 181 65.2
FAN02G1393 Fragaria x ananassa HOM05D000830 ORTHO05D008852 2.4e-57 226.1 168 67.9
AL3G11470 Arabidopsis lyrata HOM05D007258 ORTHO05D008852 3.1e-57 225.7 202 60.9
Cfa010690 Carpinus fangiana HOM05D007258 ORTHO05D008852 4.1e-57 225.3 135 76.3
PSO017G7301 Papaver somniferum HOM05D007258 ORTHO05D008852 5.3e-57 224.9 175 65.1
AT3G02220 Arabidopsis thaliana HOM05D007258 ORTHO05D008852 9.0e-57 224.2 199 60.3
TAR374G0815 Trochodendron aralioides HOM05D007258 ORTHO05D008852 1.2e-56 223.8 165 65.5
Os01g0763000 Oryza sativa ssp. japonica HOM05D007258 ORTHO05D008852 1.3e-55 220.3 187 59.9
Haze_03284 Corylus avellana HOM05D007258 ORTHO05D008852 2.2e-55 219.5 172 62.8
FAN14G1076 Fragaria x ananassa HOM05D000830 ORTHO05D008852 8.4e-55 217.6 188 61.2
EL10Ac2g04457 Beta vulgaris HOM05D007258 ORTHO05D008852 7.2e-54 214.5 200 59.0
Eucgr.L02288 Eucalyptus grandis HOM05D007258 ORTHO05D008852 1.2e-53 213.8 207 55.6
CDE07G1188 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 6.1e-53 211.5 154 66.2
Gohir.A07G181100 Gossypium hirsutum HOM05D007258 ORTHO05D008852 2.5e-51 206.1 177 59.3
SEGI_41097 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 1.3e-50 203.8 190 57.9
Eucgr.I02051 Eucalyptus grandis HOM05D007258 ORTHO05D008852 2.2e-50 203.0 170 62.4
Zm00001eb152360 Zea mays HOM05D007258 ORTHO05D008852 2.4e-49 199.5 133 66.9
Haze_14398 Corylus avellana HOM05D000041 ORTHO05D000061 5.9e-48 194.9 149 64.4
MD17G1063300 Malus domestica HOM05D007258 ORTHO05D008852 1.3e-47 193.7 112 75.9
Nitab4.5_0005120g0080 Nicotiana tabacum HOM05D007258 ORTHO05D008852 9.4e-46 187.6 211 53.6
Pp3c24_10 Physcomitrium patens HOM05D007258 ORTHO05D008852 2.0e-43 179.9 187 51.3
FAN09G2101 Fragaria x ananassa HOM05D000830 ORTHO05D008852 7.4e-43 177.9 149 63.8
Actinidia17595 Actinidia chinensis HOM05D007258 ORTHO05D008852 2.4e-41 172.9 186 52.7
MD09G1072600 Malus domestica HOM05D007258 ORTHO05D008852 1.1e-38 164.1 171 50.3
CDE04G0513 Ceratophyllum demersum HOM05D007258 ORTHO05D008852 1.1e-35 154.1 193 46.6
Atru.BG.153.p Acer truncatum HOM05D007258 ORTHO05D008852 8.2e-34 147.9 86 75.6
CBR_g1012 Chara braunii HOM05D007258 ORTHO05D008852 1.2e-32 144.1 142 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3322 Anthoceros agrestis HOM05D007258 ORTHO05D008852 1.9e-30 136.7 149 47.7
ClCG11G004890 Citrullus lanatus HOM05D007258 ORTHO05D008852 3.3e-27 125.9 64 84.4
BcaB03g16148 Brassica carinata HOM05D007258 ORTHO05D008852 1.7e-23 113.6 81 65.4
Lsat_1_v5_gn_4_141000 Lactuca sativa HOM05D007258 ORTHO05D008852 1.6e-21 107.1 63 76.2
vmacro18138 Vaccinium macrocarpon HOM05D007258 ORTHO05D008852 4.7e-21 105.5 106 57.5
ATR0037G004 Amborella trichopoda HOM05D007258 ORTHO05D008852 9.8e-19 97.8 56 78.6
Lsat_1_v5_gn_7_113001 Lactuca sativa HOM05D007258 ORTHO05D008852 2.8e-18 96.3 62 72.6
SEGI_23358 Sequoiadendron giganteum HOM05D007258 ORTHO05D008852 3.7e-18 95.9 123 48.8
Actinidia26259 Actinidia chinensis HOM05D007258 ORTHO05D008852 3.1e-17 92.8 92 57.6
ATR0037G029 Amborella trichopoda HOM05D007258 ORTHO05D008852 1.6e-13 80.5 103 46.6
Migut.I00106 Erythranthe guttata HOM05D007258 ORTHO05D008852 1.2e-08 64.3 37 70.3
MCO01G001 Micromonas commoda HOM05D007258 ORTHO05D008852 1.5e-06 57.4 94 33.0


User provided reference genes

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