Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 2.7e-213 745.0 357 100.0
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 2.1e-141 506.1 340 71.8
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 3.1e-140 502.3 359 68.8
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 5.0e-114 415.2 344 59.9
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 2.1e-112 409.8 298 65.8
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 6.7e-111 404.8 297 65.7
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 6.7e-111 404.8 294 67.3
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 2.0e-110 403.3 304 61.8
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.3e-110 402.5 323 60.4
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.1e-108 397.5 343 58.0
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 1.1e-108 397.5 326 60.4
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 3.1e-108 396.0 348 58.3
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 9.1e-108 394.4 299 64.2
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 1.2e-107 394.0 352 56.0
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 1.2e-107 394.0 309 63.1
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 1.3e-106 390.6 302 62.9
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 1.2e-104 384.0 297 62.3
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.6e-104 383.6 309 60.5
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 2.7e-104 382.9 297 63.3
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 1.4e-103 380.6 300 61.0
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 5.2e-103 378.6 309 57.9
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 6.7e-103 378.3 304 59.2
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 6.7e-103 378.3 308 59.7
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 1.2e-102 377.5 308 59.1
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 1.5e-102 377.1 312 58.3
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 4.4e-102 375.6 334 56.9
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 5.7e-102 375.2 321 57.9
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 1.3e-101 374.0 331 55.6
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 3.7e-101 372.5 332 56.3
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 4.8e-101 372.1 299 59.5
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 6.3e-101 371.7 297 59.6
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 6.3e-101 371.7 292 59.6
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 8.2e-101 371.3 336 56.0
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 8.2e-101 371.3 331 55.6
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 1.1e-100 370.9 308 59.1
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 1.8e-100 370.2 300 59.7
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 3.1e-100 369.4 327 55.7
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 4.1e-100 369.0 299 60.5
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 5.3e-100 368.6 323 56.0
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 9.1e-100 367.9 297 58.6
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 9.1e-100 367.9 321 58.3
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 1.6e-99 367.1 299 58.5
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 2.7e-99 366.3 308 58.1
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 2.7e-99 366.3 324 56.5
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 3.5e-99 365.9 301 60.1
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 7.7e-99 364.8 303 59.1
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 7.7e-99 364.8 304 57.9
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 1.7e-98 363.6 300 59.7
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 1.7e-98 363.6 311 57.6
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 3.8e-98 362.5 294 57.8
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 6.5e-98 361.7 287 61.0
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 1.1e-97 360.9 296 59.1
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 1.5e-97 360.5 299 57.2
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 2.5e-97 359.8 324 54.9
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 3.2e-97 359.4 298 58.4
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 7.2e-97 358.2 322 55.0
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 9.4e-97 357.8 297 56.9
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 3.6e-96 355.9 302 57.6
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 4.7e-96 355.5 305 55.7
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 1.4e-95 354.0 291 57.4
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 3.0e-95 352.8 325 54.5
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 4.0e-95 352.4 297 56.6
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 2.0e-94 350.1 353 53.0
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 2.6e-94 349.7 300 56.7
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 5.7e-94 348.6 304 56.6
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 5.7e-94 348.6 305 58.0
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 1.7e-93 347.1 300 57.7
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 2.2e-93 346.7 341 53.4
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.8e-93 346.3 305 57.4
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 1.1e-92 344.4 276 62.3
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 2.4e-92 343.2 298 58.7
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 5.4e-92 342.0 328 52.7
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.6e-91 340.5 297 57.6
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 1.6e-91 340.5 333 52.3
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 7.7e-91 338.2 237 66.2
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 7.7e-91 338.2 263 62.0
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 1.7e-90 337.0 299 55.2
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 1.5e-89 334.0 272 60.3
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 3.0e-87 326.2 276 57.2
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.2e-86 324.3 307 54.1
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 4.4e-86 322.4 306 53.9
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 1.7e-85 320.5 251 60.6
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 1.4e-84 317.4 332 49.1
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.0e-82 311.2 301 51.8
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 8.6e-82 308.1 306 52.6
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 9.5e-81 304.7 244 61.1
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 3.6e-80 302.8 299 49.8
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 1.0e-79 301.2 298 51.7
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.4e-79 300.8 252 58.3
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 4.0e-79 299.3 293 51.5
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 2.6e-78 296.6 239 61.5
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 9.8e-78 294.7 252 57.1
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 4.9e-77 292.4 295 49.2
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 2.7e-75 286.6 398 42.2
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 1.2e-70 271.2 308 45.5
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 2.0e-67 260.4 189 66.7
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 1.5e-65 254.2 305 47.5
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 3.2e-60 236.5 234 52.1
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 1.5e-57 227.6 305 41.3
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.6e-56 224.2 313 40.3
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.6e-56 224.2 295 42.4
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 2.6e-54 216.9 297 42.8
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 1.3e-53 214.5 276 45.7
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.4e-44 184.5 164 56.7
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 4.2e-44 183.0 257 41.2
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 1.9e-41 174.1 385 33.8
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.6e-32 144.4 164 47.0
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 1.2e-30 138.3 224 37.9
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 2.4e-28 130.6 325 31.4
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 3.3e-25 120.2 108 50.9
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 4.3e-25 119.8 109 52.3
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.1e-23 115.2 123 47.2
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 8.7e-18 95.5 104 46.2
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.6e-14 84.0 128 38.3
CSS0014268 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.8e-07 61.2 102 36.3


User provided reference genes

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