Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 2.9e-235 818.1 404 100.0
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 3.1e-181 638.6 406 77.6
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.9e-178 629.4 393 80.2
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 7.8e-148 527.7 397 66.0
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 3.9e-147 525.4 383 65.8
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 1.9e-146 523.1 384 66.4
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 1.2e-145 520.4 393 65.9
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 1.6e-145 520.0 396 64.9
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 6.2e-145 518.1 388 66.2
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 1.4e-144 516.9 392 66.8
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.3e-144 516.2 406 62.8
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 3.1e-144 515.8 394 65.5
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 5.2e-144 515.0 393 65.1
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 1.2e-143 513.8 405 62.2
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.5e-143 513.5 377 66.3
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 2.0e-143 513.1 365 68.2
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.0e-143 513.1 365 68.2
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 3.4e-143 512.3 377 66.0
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 3.4e-143 512.3 394 65.2
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 4.4e-143 511.9 400 64.8
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 5.8e-143 511.5 396 63.6
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 5.8e-143 511.5 348 69.5
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 9.9e-143 510.8 391 66.8
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 9.9e-143 510.8 401 63.1
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 1.3e-142 510.4 394 64.2
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 3.7e-142 508.8 394 64.5
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 4.9e-142 508.4 367 67.0
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 4.9e-142 508.4 348 69.5
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 4.9e-142 508.4 386 65.3
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 8.3e-142 507.7 366 67.2
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 1.4e-141 506.9 344 70.3
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.4e-141 506.9 393 64.9
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 1.9e-141 506.5 346 71.4
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 4.1e-141 505.4 346 70.5
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 4.1e-141 505.4 346 70.5
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.2e-140 503.8 342 70.8
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 1.6e-140 503.4 396 63.6
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.6e-140 503.4 345 69.0
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 2.1e-140 503.1 346 68.5
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 2.1e-140 503.1 406 61.6
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 7.8e-140 501.1 346 70.5
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.3e-139 500.4 354 67.8
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.7e-139 500.0 376 66.2
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.7e-139 500.0 343 70.0
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 3.0e-139 499.2 343 69.7
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 1.1e-138 497.3 349 68.5
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.5e-138 496.9 395 63.5
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 5.6e-138 495.0 389 64.3
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 5.6e-138 495.0 370 65.4
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 9.5e-138 494.2 391 63.9
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 1.2e-137 493.8 379 63.3
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 1.6e-137 493.4 344 70.3
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 3.6e-137 492.3 347 69.5
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 3.6e-137 492.3 347 69.5
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 6.2e-137 491.5 386 64.2
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 6.2e-137 491.5 386 64.2
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 6.2e-137 491.5 366 65.8
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 6.2e-137 491.5 423 60.0
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 1.4e-136 490.3 396 63.4
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.4e-136 489.6 366 65.6
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 4.0e-136 488.8 347 69.7
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 4.0e-136 488.8 344 68.3
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 8.9e-136 487.6 345 68.7
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 1.2e-135 487.3 393 62.3
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 1.2e-135 487.3 391 62.4
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 2.6e-135 486.1 367 64.6
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 5.8e-135 485.0 388 63.4
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.9e-134 482.6 409 60.6
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 3.8e-134 482.3 343 67.3
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 3.8e-134 482.3 388 63.4
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 8.4e-134 481.1 408 61.0
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 2.4e-133 479.6 346 67.6
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 9.2e-133 477.6 322 71.7
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 1.6e-132 476.9 341 68.9
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.1e-132 476.5 310 73.9
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 2.7e-132 476.1 341 68.6
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 3.5e-132 475.7 403 60.8
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.5e-132 475.7 341 68.6
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 6.0e-132 474.9 344 66.0
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 1.7e-131 473.4 344 66.9
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 3.0e-131 472.6 344 65.7
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 5.6e-130 468.4 352 64.5
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 9.6e-130 467.6 394 61.2
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 2.8e-129 466.1 342 65.5
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 2.4e-128 463.0 344 64.8
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 1.5e-127 460.3 349 64.8
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 1.3e-126 457.2 319 68.3
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 4.2e-125 452.2 394 58.4
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 9.3e-125 451.1 319 70.2
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 2.1e-121 439.9 345 65.2
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 9.9e-119 431.0 297 71.7
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 3.2e-117 426.0 378 56.6
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 5.4e-117 425.2 395 57.7
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 4.3e-114 415.6 302 66.9
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 2.0e-111 406.8 385 54.8
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 8.2e-105 384.8 249 73.5
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 3.4e-103 379.4 273 68.9
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 1.9e-101 373.6 257 70.4
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 1.2e-100 370.9 347 52.2
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 6.3e-97 358.6 280 62.9
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 2.5e-93 346.7 341 54.5
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 6.1e-92 342.0 271 63.8
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.7e-89 334.0 277 62.1
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 5.9e-87 325.5 394 46.4
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 1.7e-81 307.4 343 46.9
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 2.2e-81 307.0 251 60.2
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 8.0e-76 288.5 352 40.9
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 7.0e-64 248.8 382 35.9
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.2e-60 238.0 185 60.5
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 5.8e-42 176.0 137 60.6
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 9.8e-42 175.3 88 96.6
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 5.0e-38 162.9 214 43.9
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 6.2e-36 156.0 90 77.8
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.6e-34 150.6 91 73.6
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 7.5e-34 149.1 152 52.6
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.4e-32 144.8 160 47.5
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.0e-27 126.7 96 62.5
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 2.6e-18 97.4 53 77.4
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 2.8e-12 77.4 103 44.7


User provided reference genes

Program Settings