Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 2.1e-110 402.5 224 100.0
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 5.8e-60 235.0 185 80.5
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 1.1e-50 204.1 183 72.1
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 9.6e-47 191.0 182 63.7
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 2.8e-46 189.5 182 63.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 6.2e-46 188.3 181 62.4
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 1.1e-45 187.6 182 62.6
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 5.3e-45 185.3 182 62.1
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 6.9e-45 184.9 182 62.1
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 6.9e-45 184.9 182 61.5
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 6.9e-45 184.9 182 61.5
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 1.5e-44 183.7 181 59.7
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 2.6e-44 183.0 181 59.1
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.7e-43 180.3 182 61.0
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 4.9e-43 178.7 181 60.2
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 4.9e-43 178.7 181 59.1
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.1e-42 177.6 181 60.8
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.1e-42 177.6 181 60.2
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 1.9e-42 176.8 181 58.0
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 2.4e-42 176.4 181 59.7
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 4.2e-42 175.6 182 59.9
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 4.2e-42 175.6 181 58.0
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 5.4e-42 175.3 182 59.9
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 5.4e-42 175.3 181 59.1
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.2e-41 174.1 181 57.5
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 1.2e-41 174.1 181 58.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.6e-41 173.7 181 58.0
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.6e-41 173.7 181 58.0
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.6e-41 173.7 181 59.1
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.1e-41 173.3 181 58.6
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 2.1e-41 173.3 181 57.5
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 2.1e-41 173.3 181 57.5
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 2.1e-41 173.3 183 59.6
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 3.5e-41 172.6 182 58.2
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 3.5e-41 172.6 181 59.1
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 4.6e-41 172.2 182 58.8
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 4.6e-41 172.2 181 57.5
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 4.6e-41 172.2 181 56.9
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 6.0e-41 171.8 181 58.0
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 6.0e-41 171.8 181 57.5
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 6.0e-41 171.8 181 57.5
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 6.0e-41 171.8 181 56.9
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 7.9e-41 171.4 182 57.7
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 7.9e-41 171.4 183 60.7
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 7.9e-41 171.4 180 57.2
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 7.9e-41 171.4 181 58.0
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 1.0e-40 171.0 172 68.0
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 1.3e-40 170.6 182 57.7
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 1.3e-40 170.6 181 57.5
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 1.7e-40 170.2 181 56.9
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 1.7e-40 170.2 182 57.1
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.3e-40 169.9 182 58.8
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 3.0e-40 169.5 179 57.0
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 3.9e-40 169.1 177 58.8
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 5.1e-40 168.7 182 58.2
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 5.1e-40 168.7 181 57.5
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 6.6e-40 168.3 181 56.4
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.6e-40 168.3 181 56.9
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.7e-40 167.9 181 58.0
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 8.7e-40 167.9 181 55.2
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 8.7e-40 167.9 186 58.1
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 1.1e-39 167.5 181 56.9
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 1.5e-39 167.2 182 58.2
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 1.9e-39 166.8 217 50.7
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.9e-39 166.8 186 57.0
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 5.6e-39 165.2 181 55.8
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.6e-39 165.2 182 57.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 7.4e-39 164.9 182 56.0
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 7.4e-39 164.9 181 56.4
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 7.4e-39 164.9 180 57.2
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 1.3e-38 164.1 181 56.4
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 1.3e-38 164.1 182 56.6
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 1.6e-38 163.7 182 56.6
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 2.1e-38 163.3 181 54.7
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 3.6e-38 162.5 182 56.0
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 3.6e-38 162.5 181 55.8
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 8.1e-38 161.4 184 56.0
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 2.4e-37 159.8 181 54.1
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 1.2e-36 157.5 181 54.1
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 3.4e-36 156.0 191 51.8
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 9.9e-36 154.5 179 53.6
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 1.3e-35 154.1 182 52.7
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 1.3e-35 154.1 182 52.7
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.8e-35 152.5 182 52.2
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.4e-35 151.8 183 51.4
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 6.4e-35 151.8 183 51.4
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 4.2e-34 149.1 182 53.8
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 1.2e-33 147.5 181 51.4
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 1.6e-33 147.1 181 51.9
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 3.0e-32 142.9 159 56.0
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.1e-32 142.1 211 45.0
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.5e-31 139.8 182 51.6
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 3.3e-31 139.4 182 51.6
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 1.3e-30 137.5 123 75.6
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.8e-30 136.3 181 48.1
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 8.1e-30 134.8 120 65.0
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 3.1e-29 132.9 182 50.0
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 3.4e-28 129.4 185 49.2
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 1.3e-27 127.5 122 61.5
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-26 124.0 182 48.4
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 2.1e-25 120.2 185 45.9
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.7e-25 119.8 183 47.0
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 4.8e-22 109.0 114 58.8
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 1.4e-21 107.5 139 51.1
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.2e-20 104.4 183 43.7
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 1.0e-16 91.3 186 38.7
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 1.8e-16 90.5 59 78.0
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 1.5e-15 87.4 120 43.3
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 1.1e-10 71.2 43 79.1
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 7.2e-10 68.6 42 76.2


User provided reference genes

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