Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0261891 Helianthus annuus HOM05D006118 ORTHO05D007750 5.7e-189 664.1 328 100.0
Lsat_1_v5_gn_8_70541 Lactuca sativa HOM05D006118 ORTHO05D007750 3.6e-175 618.2 328 92.1
Migut.E01785 Erythranthe guttata HOM05D006118 ORTHO05D007750 9.7e-157 557.0 325 82.2
Cc08_g01010 Coffea canephora HOM05D006118 ORTHO05D007750 1.7e-153 546.2 330 80.0
MSTRG.14088 Avicennia marina HOM05D006118 ORTHO05D007750 2.1e-151 539.3 325 80.3
PGSC0003DMG402012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 4.7e-151 538.1 325 80.0
Rhsim13G0216900 Rhododendron simsii HOM05D006118 ORTHO05D007750 6.1e-151 537.7 326 80.4
SGA_v2.0_scaffold163G37995 Striga asiatica HOM05D006118 ORTHO05D007750 6.1e-151 537.7 339 79.1
Solyc08g061260.4 Solanum lycopersicum HOM05D006118 ORTHO05D007750 8.0e-151 537.3 325 79.7
Sopen08g016640 Solanum pennellii HOM05D006118 ORTHO05D007750 8.0e-151 537.3 325 79.7
DCAR_003726 Daucus carota HOM05D006118 ORTHO05D007750 5.2e-150 534.6 335 78.2
TAR624G0180 Trochodendron aralioides HOM05D006118 ORTHO05D007750 1.7e-148 529.6 327 81.0
Hma1.2p1_0641F.1_g194200 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 2.8e-148 528.9 315 81.3
GSVIVG01035487001 Vitis vinifera HOM05D006118 ORTHO05D007750 6.3e-148 527.7 324 79.6
ECA236G0212 Erigeron canadensis HOM05D006118 ORTHO05D007750 9.1e-147 523.9 266 94.4
CSS0045297 Camellia sinensis var. sinensis HOM05D006118 ORTHO05D007750 1.2e-146 523.5 291 85.2
CiPaw.16G067300 Carya illinoinensis HOM05D006118 ORTHO05D007750 2.7e-143 512.3 318 78.0
Sabra08G0153100 Salix brachista HOM05D006118 ORTHO05D007750 6.1e-143 511.1 333 76.6
Thecc.04G313700 Theobroma cacao HOM05D006118 ORTHO05D007750 1.4e-142 510.0 316 77.2
vmacro04115 Vaccinium macrocarpon HOM05D006118 ORTHO05D007750 1.4e-142 510.0 392 66.3
Cpa.g.sc146.16 Carica papaya HOM05D006118 ORTHO05D007750 2.3e-142 509.2 327 76.5
MD08G1073200 Malus domestica HOM05D006118 ORTHO05D007750 4.0e-142 508.4 327 75.5
Prupe.1G402500 Prunus persica HOM05D006118 ORTHO05D007750 1.5e-141 506.5 326 75.2
Ciclev10005468m.g Citrus clementina HOM05D006118 ORTHO05D007750 2.6e-141 505.8 321 78.2
Eucgr.C00739 Eucalyptus grandis HOM05D006118 ORTHO05D007750 2.6e-141 505.8 319 77.4
arahy.Tifrunner.gnm1.ann1.ZI0SGT Arachis hypogaea HOM05D006118 ORTHO05D007750 4.4e-141 505.0 326 76.1
RcHm_v2.0_Chr6g0312021 Rosa chinensis HOM05D006118 ORTHO05D007750 4.4e-141 505.0 327 75.5
Gohir.D02G064600 Gossypium hirsutum HOM05D006118 ORTHO05D007750 9.8e-141 503.8 316 76.6
Aqoxy7G01030 Aquilegia oxysepala HOM05D006118 ORTHO05D007750 2.2e-140 502.7 326 75.8
Gorai.005G073100 Gossypium raimondii HOM05D006118 ORTHO05D007750 2.2e-140 502.7 316 76.3
FvH4_2g30820 Fragaria vesca HOM05D006118 ORTHO05D007750 3.7e-140 501.9 327 75.5
FAN20G1786 Fragaria x ananassa HOM05D006118 ORTHO05D007750 3.7e-140 501.9 327 75.5
Gohir.A02G058900 Gossypium hirsutum HOM05D006118 ORTHO05D007750 4.9e-140 501.5 316 76.3
CANSAT25G1353 Cannabis sativa HOM05D006118 ORTHO05D007750 8.3e-140 500.7 327 75.2
Glyma.17G219300 Glycine max HOM05D006118 ORTHO05D007750 8.3e-140 500.7 326 76.4
Carub.0001s3740 Capsella rubella HOM05D006118 ORTHO05D007750 1.8e-139 499.6 331 74.0
Lj5g0024511 Lotus japonicus HOM05D006118 ORTHO05D007750 2.4e-139 499.2 326 75.5
PSO063G1448 Papaver somniferum HOM05D006118 ORTHO05D007750 2.4e-139 499.2 326 74.8
FAN15G2451 Fragaria x ananassa HOM05D006118 ORTHO05D007750 4.1e-139 498.4 327 74.9
AL1G54870 Arabidopsis lyrata HOM05D006118 ORTHO05D007750 5.4e-139 498.0 331 73.7
AT1G48270 Arabidopsis thaliana HOM05D006118 ORTHO05D007750 7.0e-139 497.7 331 73.4
ClCG05G015850 Citrullus lanatus HOM05D006118 ORTHO05D007750 7.0e-139 497.7 326 74.5
FAN27G1493 Fragaria x ananassa HOM05D006118 ORTHO05D007750 9.2e-139 497.3 327 74.9
PSO421G0086 Papaver somniferum HOM05D006118 ORTHO05D007750 1.2e-138 496.9 326 75.2
Phvul.001G044800 Phaseolus vulgaris HOM05D006118 ORTHO05D007750 1.2e-138 496.9 326 75.5
MD15G1048100 Malus domestica HOM05D006118 ORTHO05D007750 2.0e-138 496.1 321 75.4
MELO3C016921.2 Cucumis melo HOM05D006118 ORTHO05D007750 3.5e-138 495.4 326 73.6
Atru.chr4.3167 Acer truncatum HOM05D006118 ORTHO05D007750 4.5e-138 495.0 326 75.5
arahy.Tifrunner.gnm1.ann1.Z643MN Arachis hypogaea HOM05D006118 ORTHO05D007750 4.5e-138 495.0 336 73.5
CsaV3_4G036130 Cucumis sativus L. HOM05D006118 ORTHO05D007750 4.5e-138 495.0 326 73.6
Sed0026686 Sechium edule HOM05D006118 ORTHO05D007750 1.3e-137 493.4 312 75.3
CARHR037890 Cardamine hirsuta HOM05D006118 ORTHO05D007750 2.9e-137 492.3 332 72.9
Ca_13095_v3 Cicer arietinum L. HOM05D006118 ORTHO05D007750 3.8e-137 491.9 326 75.2
BolC6t35406H Brassica oleracea HOM05D006118 ORTHO05D007750 1.1e-136 490.3 332 72.6
Thhalv10011644m.g Eutrema salsugineum HOM05D006118 ORTHO05D007750 3.3e-136 488.8 333 71.8
BcaB07g33772 Brassica carinata HOM05D006118 ORTHO05D007750 2.8e-135 485.7 333 72.1
Duzib151G0955 Durio zibethinus HOM05D006118 ORTHO05D007750 2.8e-135 485.7 292 78.1
Sp1g35230 Schrenkiella parvula HOM05D006118 ORTHO05D007750 3.6e-135 485.3 333 71.8
BcaC08g43024 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-134 483.8 333 71.8
C06p02770 Brassica napus HOM05D006118 ORTHO05D007750 1.0e-134 483.8 333 71.8
A06p04570 Brassica napus HOM05D006118 ORTHO05D007750 1.4e-134 483.4 334 71.6
BraA06t23661Z Brassica rapa HOM05D006118 ORTHO05D007750 1.4e-134 483.4 334 71.6
Actinidia01325 Actinidia chinensis HOM05D006118 ORTHO05D007750 3.0e-134 482.3 274 85.0
Manes.03G212200 Manihot esculenta HOM05D006118 ORTHO05D007750 4.0e-134 481.9 326 74.8
SalBow1G5335 Salvia bowleyana HOM05D006118 ORTHO05D007750 4.0e-134 481.9 427 60.7
Nitab4.5_0001576g0100 Nicotiana tabacum HOM05D006118 ORTHO05D007750 5.2e-134 481.5 323 75.2
VMungo0647G1968 Vigna mungo HOM05D006118 ORTHO05D007750 2.6e-133 479.2 290 80.7
Glyma.14G107200 Glycine max HOM05D006118 ORTHO05D007750 3.4e-133 478.8 290 80.3
Lalb_Chr24g0393681 Lupinus albus HOM05D006118 ORTHO05D007750 1.4e-131 473.4 325 72.9
Dinv41849 Davidia involucrata HOM05D006118 ORTHO05D007750 3.2e-131 472.2 263 84.0
PGR142G4277 Punica granatum HOM05D006118 ORTHO05D007750 3.2e-131 472.2 325 72.3
Sc06g0000090 Simmondsia chinensis HOM05D006118 ORTHO05D007750 2.0e-130 469.5 322 73.3
THA.LOC104824720 Tarenaya hassleriana HOM05D006118 ORTHO05D007750 3.1e-126 455.7 320 71.2
Oeu036787.2 Olea europaea HOM05D006118 ORTHO05D007750 1.5e-125 453.4 276 79.3
Hma1.2p1_0641F.1_g194210 Hydrangea macrophylla HOM05D006118 ORTHO05D007750 8.6e-121 437.6 254 81.1
TWI53G1421 Tripterygium wilfordii HOM05D006118 ORTHO05D007750 1.1e-120 437.2 321 71.3
Medtr1g015010 Medicago truncatula HOM05D006118 ORTHO05D007750 4.3e-120 435.3 327 68.8
Psat6g023080 Pisum sativum HOM05D006118 ORTHO05D007750 6.2e-119 431.4 290 75.2
Os06g0199800 Oryza sativa ssp. japonica HOM05D006118 ORTHO05D007750 1.4e-118 430.3 310 67.7
Peaxi162Scf00486g00116 Petunia axillaris HOM05D006118 ORTHO05D007750 6.8e-118 427.9 325 67.7
Potri.008G206000 Populus trichocarpa HOM05D006118 ORTHO05D007750 6.8e-118 427.9 291 74.6
CDE06G0461 Ceratophyllum demersum HOM05D006118 ORTHO05D007750 8.9e-118 427.6 295 71.9
Aa31LG10G5490 Aethionema arabicum HOM05D006118 ORTHO05D007750 7.1e-115 417.9 332 65.7
Oeu024208.1 Olea europaea HOM05D006118 ORTHO05D007750 1.9e-112 409.8 250 79.6
AagrBONN_evm.TU.Sc2ySwM_228.1339 Anthoceros agrestis HOM05D006118 ORTHO05D007750 2.1e-111 406.4 316 63.9
FAN24G3410 Fragaria x ananassa HOM05D006118 ORTHO05D007750 1.1e-110 404.1 261 74.3
COL.COLO4_34509 Corchorus olitorius HOM05D006118 ORTHO05D007750 1.4e-110 403.7 353 60.6
TPR.G38901 Trifolium pratense HOM05D006118 ORTHO05D007750 2.0e-109 399.8 267 73.4
Ah.12g061330 Amaranthus hybridus HOM05D006118 ORTHO05D007750 4.4e-109 398.7 317 64.0
AUR62020280 Chenopodium quinoa HOM05D006118 ORTHO05D007750 2.2e-108 396.4 304 67.8
Mapoly0073s0070 Marchantia polymorpha HOM05D006118 ORTHO05D007750 1.6e-106 390.2 293 65.2
EL10Ac2g02406 Beta vulgaris HOM05D006118 ORTHO05D007750 1.1e-102 377.5 323 60.7
Pp3c15_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 8.4e-100 367.9 295 60.3
Pp3c9_15980 Physcomitrium patens HOM05D006118 ORTHO05D007750 7.1e-99 364.8 295 60.0
Hund25545 Selenicereus undatus HOM05D006118 ORTHO05D007750 3.6e-95 352.4 290 63.8
SMO119G0499 Selaginella moellendorffii HOM05D006118 ORTHO05D007750 1.8e-94 350.1 270 62.2
ATR0598G044 Amborella trichopoda HOM05D006118 ORTHO05D007750 9.3e-91 337.8 212 77.8
Haze_18321 Corylus avellana HOM05D006118 ORTHO05D007750 6.0e-90 335.1 647 36.2
AUR62037725 Chenopodium quinoa HOM05D006118 ORTHO05D007750 1.7e-89 333.6 322 56.8
Lj7A209G43 Lonicera japonica HOM05D006118 ORTHO05D007750 1.3e-87 327.4 243 70.4
HPP92_016236 Vanilla planifolia HOM05D006118 ORTHO05D007750 2.3e-81 306.6 320 52.2
Zm00001eb278600 Zea mays HOM05D006118 ORTHO05D007750 9.3e-75 284.6 194 65.5
PGSC0003DMG401012996 Solanum tuberosum HOM05D006118 ORTHO05D007750 8.7e-73 278.1 167 79.0
arahy.Tifrunner.gnm1.ann1.C1NZN8 Arachis hypogaea HOM05D006118 ORTHO05D007750 1.9e-72 276.9 332 50.0
CBR_g36835 Chara braunii HOM05D006118 ORTHO05D007750 4.8e-71 272.3 223 59.6
BcaB01g03835 Brassica carinata HOM05D006118 ORTHO05D007750 4.1e-70 269.2 195 69.2
Nitab4.5_0009849g0030 Nicotiana tabacum HOM05D006118 ORTHO05D007750 1.7e-68 263.8 325 50.2
unitig_8.g4842 Utricularia gibba HOM05D006118 ORTHO05D007750 2.4e-62 243.4 156 75.6
BcaB08g36375 Brassica carinata HOM05D006118 ORTHO05D007750 2.6e-61 240.0 195 64.6
arahy.Tifrunner.gnm1.ann1.K6H74S Arachis hypogaea HOM05D006118 ORTHO05D007750 1.0e-57 228.0 163 68.7
MD15G1048300 Malus domestica HOM05D006118 ORTHO05D007750 5.7e-56 222.2 248 51.2
BcaB07g32513 Brassica carinata HOM05D006118 ORTHO05D007750 3.2e-51 206.5 181 55.2
BcaB01g01553 Brassica carinata HOM05D006118 ORTHO05D007750 9.4e-51 204.9 151 65.6
arahy.Tifrunner.gnm1.ann1.M0UG3B Arachis hypogaea HOM05D005235 ORTHO05D006938 4.5e-45 186.0 129 70.5
Lalb_Chr23g0268011 Lupinus albus HOM05D006118 ORTHO05D007750 1.4e-41 174.5 105 77.1
Lj7A209G42 Lonicera japonica HOM05D006118 ORTHO05D007750 7.5e-40 168.7 90 85.6
PRCOL_00004868 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 6.1e-34 149.1 278 36.0
ATR0684G160 Amborella trichopoda HOM05D006118 ORTHO05D007750 1.1e-30 138.3 98 67.3
PRCOL_00005697 Prasinoderma coloniale HOM05D006118 ORTHO05D007750 1.0e-28 131.7 287 31.7
SEGI_23264 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 7.2e-27 125.6 80 75.0
MCO03G156 Micromonas commoda HOM05D006118 ORTHO05D007750 5.6e-19 99.4 354 26.0
Lalb_Chr23g0268021 Lupinus albus HOM05D006118 ORTHO05D007750 1.5e-11 74.7 46 76.1
BcaB01g01552 Brassica carinata HOM05D006118 ORTHO05D007750 1.0e-09 68.6 52 67.3
MD15G1048200 Malus domestica HOM05D006118 ORTHO05D007750 1.7e-07 61.2 53 62.3
HPP92_016211 Vanilla planifolia HOM05D006118 ORTHO05D007750 7.0e-06 55.8 57 52.6
MSTRG.1710 Avicennia marina HOM05D006118 ORTHO05D007750 9.2e-06 55.5 30 73.3
SEGI_18851 Sequoiadendron giganteum HOM05D006118 ORTHO05D007750 9.2e-06 55.5 59 52.5


User provided reference genes

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