Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 2.4e-156 555.4 281 100.0
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.4e-132 475.7 271 86.7
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 6.9e-127 457.6 277 82.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.1e-111 405.6 263 76.8
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.1e-111 405.6 263 76.8
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.3e-111 404.8 264 77.3
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.0e-109 400.6 265 75.1
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 6.5e-109 397.9 270 75.2
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 5.5e-108 394.8 277 72.6
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 9.3e-108 394.0 270 74.8
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 9.7e-105 384.0 285 67.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 4.8e-104 381.7 268 73.5
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 6.3e-104 381.3 262 75.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.1e-103 380.6 268 72.8
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 5.3e-103 378.3 271 70.1
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 9.1e-103 377.5 261 72.8
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 9.1e-103 377.5 276 73.2
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 9.1e-103 377.5 276 73.2
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 1.5e-102 376.7 273 69.6
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 1.5e-102 376.7 259 74.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 3.4e-102 375.6 272 69.9
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 4.5e-102 375.2 275 70.2
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 4.5e-102 375.2 268 70.9
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 5.9e-102 374.8 264 72.0
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 1.0e-101 374.0 255 73.3
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.9e-101 372.5 267 70.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 2.9e-101 372.5 275 69.8
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 6.5e-101 371.3 268 70.1
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 3.2e-100 369.0 275 69.1
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.2e-100 369.0 276 71.4
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 5.5e-100 368.2 263 71.5
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 5.5e-100 368.2 251 72.1
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 9.4e-100 367.5 274 69.3
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.6e-99 366.7 268 70.5
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 2.1e-99 366.3 275 68.7
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.7e-99 365.9 276 71.4
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 3.6e-99 365.5 274 69.3
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 4.6e-99 365.2 271 69.4
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 6.1e-99 364.8 279 68.1
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 6.1e-99 364.8 271 68.3
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 6.1e-99 364.8 272 69.5
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.1e-99 364.8 254 71.3
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.0e-98 364.0 264 68.2
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.3e-98 362.8 267 70.0
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.3e-98 362.8 258 70.9
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 3.0e-98 362.5 272 68.8
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 3.0e-98 362.5 264 68.2
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 3.9e-98 362.1 285 66.3
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 3.9e-98 362.1 264 67.8
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 5.1e-98 361.7 258 71.3
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.1e-98 361.7 258 71.3
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 6.7e-98 361.3 263 68.8
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 6.7e-98 361.3 272 69.1
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 8.8e-98 360.9 277 66.1
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 1.5e-97 360.1 267 70.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.0e-97 359.8 262 69.1
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 2.6e-97 359.4 272 68.8
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 3.3e-97 359.0 278 65.1
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 7.4e-97 357.8 254 70.9
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 7.4e-97 357.8 271 67.9
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 9.7e-97 357.5 257 70.4
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.3e-96 357.1 271 68.6
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.3e-96 357.1 271 68.6
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.6e-94 349.4 266 67.7
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 3.4e-94 349.0 275 65.8
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 7.7e-94 347.8 276 67.4
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 1.0e-93 347.4 256 69.1
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 1.7e-93 346.7 275 65.5
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 2.2e-93 346.3 264 66.3
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 5.0e-93 345.1 263 67.3
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 5.0e-93 345.1 337 57.3
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 6.5e-93 344.7 264 66.7
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 8.5e-93 344.4 283 64.0
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.1e-92 344.0 265 67.5
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.1e-92 344.0 274 66.4
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 3.2e-92 342.4 267 64.8
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 7.2e-92 341.3 267 64.4
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 9.4e-92 340.9 270 67.0
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.2e-91 340.5 272 64.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.1e-91 339.7 264 68.2
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 2.1e-91 339.7 253 69.6
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 2.7e-91 339.3 272 64.3
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 3.0e-90 335.9 265 67.5
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 6.7e-90 334.7 256 66.8
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.5e-89 333.6 263 62.4
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 8.5e-85 317.8 276 64.1
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 9.4e-84 314.3 276 63.8
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 1.1e-79 300.8 268 59.0
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 6.5e-77 291.6 263 58.6
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 1.3e-72 277.3 193 71.0
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 4.1e-71 272.3 177 74.0
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.0e-66 257.7 185 66.5
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 8.9e-66 254.6 256 55.1
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 1.7e-64 250.4 173 71.1
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 8.3e-64 248.1 174 72.4
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 1.3e-56 224.2 174 65.5
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.7e-56 223.8 180 64.4
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 1.4e-55 220.7 276 43.1
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 2.4e-55 219.9 267 46.8
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.5e-52 209.9 137 73.0
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 6.2e-51 205.3 279 45.5
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 2.3e-50 203.4 167 64.7
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.4e-49 199.1 158 64.6
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.3e-48 197.6 270 45.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 2.5e-44 183.3 269 45.4
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.6e-41 173.3 274 40.9
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.2e-39 166.4 128 68.0
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.6e-38 162.5 226 42.0
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 5.6e-28 129.0 271 36.2
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 2.6e-25 120.2 81 69.1
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 7.1e-23 112.1 78 69.2
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 3.9e-21 106.3 68 76.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 4.8e-19 99.4 162 40.1
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 2.4e-18 97.1 72 65.3
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.0e-18 96.3 173 43.4
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.4e-15 87.0 65 66.2
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 4.6e-14 82.8 132 41.7
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 6.0e-14 82.4 73 56.2
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.7e-11 73.2 81 48.1


User provided reference genes

Program Settings