Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 3.3e-90 335.1 178 100.0
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 2.5e-58 229.2 144 84.7
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 2.3e-51 206.1 177 62.7
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.1e-50 203.8 178 61.2
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.0e-47 193.0 148 70.9
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 4.9e-46 188.3 175 57.7
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 4.2e-45 185.3 178 55.1
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 7.1e-45 184.5 178 55.1
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.1e-44 183.0 178 54.5
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 6.7e-43 177.9 167 56.9
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 1.1e-42 177.2 176 53.4
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.1e-42 177.2 156 58.3
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.9e-42 176.4 176 55.1
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 2.5e-42 176.0 169 54.4
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 3.3e-42 175.6 167 56.3
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 4.3e-42 175.3 172 52.3
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.3e-41 173.7 171 55.6
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 1.3e-41 173.7 168 58.3
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 2.8e-41 172.6 167 54.5
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 4.8e-41 171.8 171 52.6
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 6.2e-41 171.4 171 54.4
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 8.2e-41 171.0 174 55.2
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.1e-40 170.6 162 59.3
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.4e-40 169.5 167 52.1
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 2.4e-40 169.5 179 51.4
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 5.3e-40 168.3 176 54.5
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 1.2e-39 167.2 160 56.9
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 2.0e-39 166.4 171 53.2
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 4.5e-39 165.2 160 56.2
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 4.5e-39 165.2 167 50.3
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 5.8e-39 164.9 177 52.0
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 7.6e-39 164.5 167 50.3
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.0e-38 164.1 166 52.4
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 1.0e-38 164.1 172 52.3
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.7e-38 163.3 168 54.2
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.7e-38 163.3 168 54.2
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.2e-38 162.9 171 52.0
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 3.8e-38 162.2 162 56.2
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 6.5e-38 161.4 173 51.4
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 8.4e-38 161.0 171 53.8
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 8.4e-38 161.0 173 52.6
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.5e-37 159.5 138 58.0
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 3.2e-37 159.1 171 49.1
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 7.1e-37 157.9 163 52.8
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 9.3e-37 157.5 158 51.9
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.2e-36 157.1 165 52.1
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 2.1e-36 156.4 158 51.3
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 2.1e-36 156.4 160 51.9
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 2.1e-36 156.4 169 47.3
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 3.5e-36 155.6 169 50.9
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 4.6e-36 155.2 171 49.1
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 7.9e-36 154.5 162 51.2
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 1.0e-35 154.1 171 50.3
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 2.3e-35 152.9 158 50.0
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 2.3e-35 152.9 158 50.0
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.3e-35 152.9 159 52.8
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 3.0e-35 152.5 158 50.0
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.0e-35 152.5 158 50.0
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 5.1e-35 151.8 160 52.5
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 5.1e-35 151.8 174 47.7
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 5.1e-35 151.8 131 59.5
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 8.7e-35 151.0 158 50.6
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 1.1e-34 150.6 149 55.0
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.5e-34 149.4 158 50.0
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 5.7e-34 148.3 158 50.0
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 5.7e-34 148.3 162 51.9
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 5.7e-34 148.3 162 51.9
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 7.4e-34 147.9 156 55.1
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 9.7e-34 147.5 144 55.6
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 1.3e-33 147.1 161 52.2
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 2.8e-33 146.0 160 50.0
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 4.8e-33 145.2 171 44.4
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 6.3e-33 144.8 162 49.4
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.1e-32 144.1 147 55.1
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.8e-32 143.3 170 49.4
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 2.4e-32 142.9 159 48.4
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 3.1e-32 142.5 148 53.4
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 6.9e-32 141.4 165 43.0
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 6.9e-32 141.4 147 53.1
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 1.2e-31 140.6 166 50.6
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 1.5e-31 140.2 166 50.6
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 2.0e-31 139.8 148 53.4
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 2.0e-31 139.8 148 53.4
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 2.0e-31 139.8 165 44.8
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 2.6e-31 139.4 139 54.7
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.6e-31 139.4 195 42.6
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 2.6e-31 139.4 162 48.8
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 2.6e-31 139.4 149 53.7
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 3.4e-31 139.0 183 43.2
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 5.9e-31 138.3 165 43.0
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 7.6e-31 137.9 167 49.1
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 7.6e-31 137.9 171 43.3
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 2.2e-30 136.3 164 48.2
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 2.9e-30 136.0 129 56.6
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 6.5e-30 134.8 170 45.9
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 1.4e-29 133.7 173 45.7
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 1.4e-29 133.7 173 45.7
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.9e-29 133.3 212 40.6
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 2.5e-29 132.9 129 57.4
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.5e-29 132.9 167 44.3
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 2.5e-29 132.9 174 46.6
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 3.2e-29 132.5 149 50.3
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 5.5e-29 131.7 221 40.3
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 9.3e-29 131.0 175 46.9
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.2e-28 130.6 131 54.2
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 1.6e-28 130.2 145 53.8
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 1.6e-28 130.2 137 54.0
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.6e-28 130.2 170 45.3
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 2.7e-28 129.4 168 41.7
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 4.6e-28 128.6 220 38.6
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 7.9e-28 127.9 145 44.8
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.3e-27 126.3 152 45.4
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 5.1e-27 125.2 128 55.5
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 8.8e-27 124.4 172 41.9
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 8.8e-27 124.4 167 43.1
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.1e-26 124.0 151 48.3
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.1e-26 124.0 150 48.7
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 1.7e-25 120.2 173 43.9
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.7e-25 119.0 144 48.6
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 6.3e-25 118.2 164 43.3
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 6.3e-25 118.2 161 42.2
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 8.2e-25 117.9 135 51.1
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 5.3e-24 115.2 159 45.3
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 4.5e-23 112.1 174 36.8
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 5.0e-22 108.6 170 39.4
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.1e-21 107.5 113 53.1
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 7.2e-21 104.8 171 39.8
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 1.0e-19 100.9 134 46.3
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 5.1e-19 98.6 91 54.9
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 2.6e-18 96.3 91 51.6
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 3.3e-18 95.9 167 38.3
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 1.3e-17 94.0 83 50.6
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 1.3e-17 94.0 86 46.5
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 6.3e-17 91.7 83 45.8
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.5e-15 87.0 75 69.3
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 1.3e-14 84.0 75 66.7
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 2.2e-14 83.2 79 60.8
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 3.8e-14 82.4 107 44.9
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 2.5e-13 79.7 136 34.6
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 4.2e-13 79.0 114 49.1
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 1.2e-12 77.4 87 52.9
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 2.1e-12 76.6 165 33.3
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 3.9e-11 72.4 112 46.4
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 3.3e-10 69.3 84 54.8
Rhsim10G0196100 Rhododendron simsii HOM05D004607 ORTHO05D005836 7.4e-10 68.2 111 44.1
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.2e-09 66.6 80 51.2
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 4.1e-08 62.4 108 40.7
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.2e-06 56.6 51 62.7
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 3.8e-06 55.8 48 70.8
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 3.8e-06 55.8 48 70.8


User provided reference genes

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