Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 1.8e-259 899.0 569 100.0
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 1.5e-133 480.7 565 62.1
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 2.0e-133 480.3 556 61.3
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 1.1e-112 411.4 490 65.7
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 5.7e-104 382.5 489 55.6
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.8e-103 379.4 479 63.9
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 2.6e-101 373.6 478 61.5
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.9e-99 367.5 489 61.8
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 8.0e-98 362.1 550 50.4
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 1.4e-97 361.3 476 62.6
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 5.2e-97 359.4 491 60.7
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 2.6e-96 357.1 489 55.0
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 5.3e-94 349.4 479 54.7
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 5.3e-94 349.4 479 62.6
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 1.3e-92 344.7 453 58.1
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.7e-92 344.4 483 53.2
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.7e-92 344.4 453 57.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 2.9e-92 343.6 479 58.2
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 7.2e-91 339.0 490 59.0
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 4.7e-90 336.3 453 57.6
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 2.3e-89 334.0 453 54.1
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 2.3e-89 334.0 500 52.2
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 4.0e-89 333.2 453 54.1
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 5.2e-89 332.8 488 59.6
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 8.8e-89 332.0 488 59.6
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.5e-88 331.3 477 60.0
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 1.5e-88 331.3 464 61.2
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 1.5e-88 331.3 473 60.5
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 1.5e-88 331.3 448 55.8
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 9.8e-88 328.6 476 59.9
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 3.7e-87 326.6 485 52.8
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 1.8e-86 324.3 465 60.9
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.8e-86 324.3 467 55.0
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 5.4e-86 322.8 478 57.5
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 1.6e-85 321.2 551 48.6
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 3.5e-85 320.1 460 52.8
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 5.9e-85 319.3 501 57.9
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 3.8e-84 316.6 486 57.2
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 5.0e-84 316.2 451 61.0
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 6.6e-84 315.8 475 52.8
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.5e-83 314.7 498 56.8
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.5e-83 314.7 451 53.2
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 4.2e-83 313.2 395 65.8
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 1.6e-82 311.2 444 54.5
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 4.7e-82 309.7 508 56.5
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.4e-81 308.1 480 50.0
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 3.0e-81 307.0 446 52.2
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 5.2e-81 306.2 416 54.1
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.4e-80 303.5 482 58.9
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 7.5e-80 302.4 485 56.7
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.4e-78 298.1 491 48.7
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 2.4e-78 297.4 468 48.9
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.3e-76 291.6 425 54.1
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 6.6e-76 289.3 438 54.6
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 6.1e-74 282.7 292 56.5
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 4.0e-73 280.0 381 61.9
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 8.9e-73 278.9 498 54.0
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.0e-72 277.7 476 47.9
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 6.4e-71 272.7 498 53.4
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 2.4e-70 270.8 497 37.6
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 7.0e-70 269.2 490 54.9
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 3.5e-69 266.9 489 48.3
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.0e-68 265.4 498 53.6
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 2.3e-68 264.2 460 48.3
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 9.5e-67 258.8 489 37.8
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 4.0e-65 253.4 321 64.8
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 4.4e-64 250.0 427 52.5
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 4.4e-64 250.0 485 47.0
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.7e-63 246.9 488 44.3
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 1.2e-61 241.9 305 65.6
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 4.6e-61 240.0 342 55.6
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 3.6e-58 230.3 492 43.1
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 6.8e-57 226.1 503 33.6
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 9.2e-54 215.7 550 46.7
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 9.2e-54 215.7 259 49.0
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.2e-53 215.3 288 44.1
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 2.5e-51 207.6 271 45.8
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 5.6e-51 206.5 263 45.2
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 7.6e-48 196.1 264 44.3
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 8.4e-47 192.6 503 40.4
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 5.4e-38 163.3 251 70.1
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 5.4e-38 163.3 251 70.1
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.3e-34 152.1 111 64.9
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.1e-33 147.5 100 71.0
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 2.2e-31 141.4 239 58.2
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.1e-30 139.0 114 60.5
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 1.8e-28 131.7 112 58.9
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 4.3e-27 127.1 186 43.5
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.6e-26 125.2 404 45.5
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 8.4e-23 112.8 100 52.0
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 7.9e-21 106.3 120 50.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 1.0e-20 105.9 491 26.3
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 1.3e-20 105.5 362 26.8
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 8.7e-20 102.8 105 54.3
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.1e-19 102.4 68 64.7
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.8e-17 95.1 111 48.6
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 3.1e-17 94.4 135 43.0
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 1.3e-15 89.0 165 38.2
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 3.8e-15 87.4 178 34.3
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 1.9e-14 85.1 383 32.1
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 3.2e-14 84.3 180 32.2
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 9.3e-14 82.8 60 66.7
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 2.3e-12 78.2 68 52.9
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.5e-11 75.5 102 41.2
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 5.7e-11 73.6 277 26.4
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 6.3e-10 70.1 214 29.0
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 1.1e-09 69.3 136 39.7
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 1.4e-09 68.9 70 47.1
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 2.4e-09 68.2 64 54.7
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 2.9e-07 61.2 100 39.0
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 3.2e-06 57.8 48 58.3
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 5.5e-06 57.0 35 71.4


User provided reference genes

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