Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0259631 Helianthus annuus HOM05D004210 ORTHO05D005017 3.7e-312 1073.5 538 100.0
Lsat_1_v5_gn_4_138820 Lactuca sativa HOM05D004210 ORTHO05D005017 1.0e-224 783.5 562 76.2
ECA248G0690 Erigeron canadensis HOM05D004210 ORTHO05D005017 5.2e-224 781.2 521 78.1
Dinv04121 Davidia involucrata HOM05D004210 ORTHO05D005017 1.9e-213 746.1 548 74.1
Lj8A287G21 Lonicera japonica HOM05D004210 ORTHO05D005017 2.2e-206 722.6 539 71.1
CANSAT56G1750 Cannabis sativa HOM05D004210 ORTHO05D005017 1.6e-204 716.5 514 73.5
Cc08_g06030 Coffea canephora HOM05D004210 ORTHO05D005017 2.1e-204 716.1 543 70.9
Actinidia18370 Actinidia chinensis HOM05D004210 ORTHO05D005017 4.6e-204 714.9 539 71.4
MSTRG.20468 Avicennia marina HOM05D004210 ORTHO05D005017 7.8e-204 714.1 507 74.2
CiPaw.14G037100 Carya illinoinensis HOM05D004210 ORTHO05D005017 1.5e-202 709.9 551 69.9
Prupe.5G058900 Prunus persica HOM05D004210 ORTHO05D005017 2.1e-201 706.1 511 73.0
GSVIVG01018295001 Vitis vinifera HOM05D004210 ORTHO05D005017 1.4e-200 703.4 541 69.9
TAR376G0596 Trochodendron aralioides HOM05D004210 ORTHO05D005017 2.4e-200 702.6 550 69.6
MELO3C012312.2 Cucumis melo HOM05D004210 ORTHO05D005017 4.0e-200 701.8 551 68.4
ClCG05G022120 Citrullus lanatus HOM05D004210 ORTHO05D005017 5.2e-200 701.4 551 68.4
Rhsim04G0193600 Rhododendron simsii HOM05D004210 ORTHO05D005017 8.9e-200 700.7 516 72.7
CsaV3_5G035020 Cucumis sativus L. HOM05D004210 ORTHO05D005017 1.2e-199 700.3 551 68.4
Nn5g30473 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.5e-199 699.9 542 69.6
vmacro20845 Vaccinium macrocarpon HOM05D004210 ORTHO05D005017 1.5e-199 699.9 515 72.0
Atru.chr10.436 Acer truncatum HOM05D004210 ORTHO05D005017 1.7e-198 696.4 546 69.6
Haze_03415 Corylus avellana HOM05D004210 ORTHO05D005017 2.9e-198 695.7 545 70.5
Cpa.g.sc138.49 Carica papaya HOM05D004210 ORTHO05D005017 6.4e-198 694.5 554 69.3
Potri.019G000900 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.1e-197 693.7 534 68.7
COL.COLO4_16323 Corchorus olitorius HOM05D004210 ORTHO05D005017 9.2e-197 690.6 559 69.1
Duzib114G0085 Durio zibethinus HOM05D004210 ORTHO05D005017 9.2e-197 690.6 556 68.7
RcHm_v2.0_Chr6g0268021 Rosa chinensis HOM05D004210 ORTHO05D005017 9.2e-197 690.6 510 71.4
FvH4_2g10510 Fragaria vesca HOM05D004210 ORTHO05D005017 1.2e-196 690.3 510 71.4
Potri.001G305500 Populus trichocarpa HOM05D004210 ORTHO05D005017 1.2e-196 690.3 550 69.8
Sed0005167 Sechium edule HOM05D004210 ORTHO05D005017 2.1e-196 689.5 549 68.7
Nitab4.5_0001611g0030 Nicotiana tabacum HOM05D004210 ORTHO05D005017 3.5e-196 688.7 536 70.5
Peaxi162Scf00647g00139 Petunia axillaris HOM05D004210 ORTHO05D005017 3.5e-196 688.7 527 71.3
FAN15G0031 Fragaria x ananassa HOM05D004210 ORTHO05D005017 4.6e-196 688.3 510 71.2
PGR142G1915 Punica granatum HOM05D004210 ORTHO05D005017 4.6e-196 688.3 556 66.9
Thecc.10G122400 Theobroma cacao HOM05D004210 ORTHO05D005017 6.0e-196 688.0 556 68.0
FAN24G2713 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.0e-195 687.2 510 71.2
QL04p049870 Quercus lobata HOM05D004210 ORTHO05D005017 1.7e-195 686.4 469 75.1
Ciclev10014800m.g Citrus clementina HOM05D004210 ORTHO05D005017 3.0e-195 685.6 551 68.6
Gohir.A13G003500 Gossypium hirsutum HOM05D004210 ORTHO05D005017 3.9e-195 685.3 559 66.9
Gohir.D13G003400 Gossypium hirsutum HOM05D004210 ORTHO05D005017 3.9e-195 685.3 558 67.0
Gorai.013G003300 Gossypium raimondii HOM05D004210 ORTHO05D005017 5.1e-195 684.9 558 67.0
TAR625G1450 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.9e-194 682.9 540 68.9
FAN20G0431 Fragaria x ananassa HOM05D004210 ORTHO05D005017 3.3e-194 682.2 510 70.8
MD07G1061200 Malus domestica HOM05D004210 ORTHO05D005017 4.3e-194 681.8 478 73.8
Sabra19G0005800 Salix brachista HOM05D004210 ORTHO05D005017 7.3e-194 681.0 561 66.0
DCAR_002139 Daucus carota HOM05D004210 ORTHO05D005017 9.6e-194 680.6 547 67.8
Sabra19G0014200 Salix brachista HOM05D004210 ORTHO05D005017 9.6e-194 680.6 561 66.0
Manes.13G078700 Manihot esculenta HOM05D004210 ORTHO05D005017 1.3e-193 680.2 537 69.5
FAN27G0821 Fragaria x ananassa HOM05D004210 ORTHO05D005017 1.6e-193 679.9 515 70.3
Sabra16G0191800 Salix brachista HOM05D004210 ORTHO05D005017 1.6e-193 679.9 538 69.9
Sed0024731 Sechium edule HOM05D004210 ORTHO05D005017 2.8e-193 679.1 543 68.0
Glyma.06G315900 Glycine max HOM05D004210 ORTHO05D005017 4.8e-193 678.3 539 68.5
Glyma.13G124200 Glycine max HOM05D004210 ORTHO05D005017 8.1e-193 677.6 545 67.9
Nitab4.5_0004014g0070 Nicotiana tabacum HOM05D004210 ORTHO05D005017 1.4e-192 676.8 539 69.2
Glyma.08G229800 Glycine max HOM05D004210 ORTHO05D005017 1.8e-192 676.4 549 66.5
Migut.B01123 Erythranthe guttata HOM05D004210 ORTHO05D005017 3.1e-192 675.6 520 70.8
CSS0018495 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 5.3e-192 674.9 548 68.4
arahy.Tifrunner.gnm1.ann1.374KBL Arachis hypogaea HOM05D004210 ORTHO05D005017 6.9e-192 674.5 542 67.3
arahy.Tifrunner.gnm1.ann1.3JDG4T Arachis hypogaea HOM05D004210 ORTHO05D005017 6.9e-192 674.5 542 67.5
TAR381G0930 Trochodendron aralioides HOM05D004210 ORTHO05D005017 1.5e-191 673.3 468 73.1
Solyc01g096950.4 Solanum lycopersicum HOM05D004210 ORTHO05D005017 4.4e-191 671.8 526 69.2
Phvul.008G161500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 5.8e-191 671.4 545 66.8
PGSC0003DMG400027522 Solanum tuberosum HOM05D004210 ORTHO05D005017 5.8e-191 671.4 530 68.9
MD02G1259400 Malus domestica HOM05D004210 ORTHO05D005017 2.2e-190 669.5 477 73.0
Sopen01g040660 Solanum pennellii HOM05D004210 ORTHO05D005017 2.2e-190 669.5 529 68.8
Glyma.05G087400 Glycine max HOM05D004210 ORTHO05D005017 2.9e-190 669.1 538 67.1
Psat4g180480 Pisum sativum HOM05D004210 ORTHO05D005017 2.9e-190 669.1 542 66.6
TPR.G14605 Trifolium pratense HOM05D004210 ORTHO05D005017 2.9e-190 669.1 549 65.9
Medtr8g041740 Medicago truncatula HOM05D004210 ORTHO05D005017 1.1e-189 667.2 534 66.7
arahy.Tifrunner.gnm1.ann1.A6SQAT Arachis hypogaea HOM05D004210 ORTHO05D005017 2.4e-189 666.0 542 66.8
SalBow4G0418 Salvia bowleyana HOM05D004210 ORTHO05D005017 2.7e-188 662.5 524 67.9
Aa31LG8G7780 Aethionema arabicum HOM05D004210 ORTHO05D005017 4.6e-188 661.8 548 64.8
Aqoxy1G00569 Aquilegia oxysepala HOM05D004210 ORTHO05D005017 4.6e-188 661.8 549 64.7
PSO541G0139 Papaver somniferum HOM05D004210 ORTHO05D005017 3.3e-186 655.6 553 65.1
TPR.G24022 Trifolium pratense HOM05D004210 ORTHO05D005017 3.3e-186 655.6 547 64.4
Hma1.2p1_0892F.1_g233380 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 4.3e-186 655.2 511 71.2
Medtr8g045440 Medicago truncatula HOM05D004210 ORTHO05D005017 9.6e-186 654.1 550 64.5
Lj3g0025560 Lotus japonicus HOM05D004210 ORTHO05D005017 1.4e-184 650.2 553 65.3
C01p43210 Brassica napus HOM05D004210 ORTHO05D005017 1.8e-184 649.8 549 64.8
Oeu012473.1 Olea europaea HOM05D004210 ORTHO05D005017 2.4e-184 649.4 489 69.7
BolC1t04267H Brassica oleracea HOM05D004210 ORTHO05D005017 3.1e-184 649.0 549 64.5
BcaC09g49045 Brassica carinata HOM05D004210 ORTHO05D005017 5.3e-184 648.3 549 64.7
BraA01t03490Z Brassica rapa HOM05D004210 ORTHO05D005017 5.3e-184 648.3 541 64.7
Phvul.003G276000 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 5.3e-184 648.3 548 65.3
Hund06390 Selenicereus undatus HOM05D004210 ORTHO05D005017 5.3e-184 648.3 534 65.9
Lalb_Chr01g0007661 Lupinus albus HOM05D004210 ORTHO05D005017 6.9e-184 647.9 545 64.6
HPP92_001742 Vanilla planifolia HOM05D004210 ORTHO05D005017 1.2e-183 647.1 546 63.7
Carub.0003s2096 Capsella rubella HOM05D004210 ORTHO05D005017 1.5e-183 646.7 554 63.2
PSO478G0462 Papaver somniferum HOM05D004210 ORTHO05D005017 9.9e-183 644.0 553 64.4
VMungo0251G3202 Vigna mungo HOM05D004210 ORTHO05D005017 9.9e-183 644.0 548 65.0
AUR62025703 Chenopodium quinoa HOM05D004210 ORTHO05D005017 1.3e-182 643.7 542 64.4
Oeu027040.1 Olea europaea HOM05D004210 ORTHO05D005017 1.3e-182 643.7 449 73.3
AUR62001320 Chenopodium quinoa HOM05D004210 ORTHO05D005017 2.2e-182 642.9 559 62.4
Medtr8g045463 Medicago truncatula HOM05D004210 ORTHO05D005017 8.4e-182 641.0 551 62.1
Medtr8g045470 Medicago truncatula HOM05D004210 ORTHO05D005017 8.4e-182 641.0 551 62.1
CDE04G1921 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 3.2e-181 639.0 564 63.1
Ca_05576_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 3.2e-181 639.0 589 61.1
Sp3g19020 Schrenkiella parvula HOM05D004210 ORTHO05D005017 3.2e-181 639.0 544 62.7
THA.LOC104804661 Tarenaya hassleriana HOM05D004210 ORTHO05D005017 3.2e-181 639.0 552 62.3
CDE07G1685 Ceratophyllum demersum HOM05D004210 ORTHO05D005017 5.4e-181 638.3 563 63.4
AT3G21060 Arabidopsis thaliana HOM05D004210 ORTHO05D005017 1.6e-180 636.7 542 62.9
Thhalv10020461m.g Eutrema salsugineum HOM05D004210 ORTHO05D005017 3.5e-180 635.6 548 63.1
Psat4g200760 Pisum sativum HOM05D004210 ORTHO05D005017 3.5e-180 635.6 547 64.7
Glyma.04G129500 Glycine max HOM05D004210 ORTHO05D005017 6.0e-180 634.8 544 64.0
Hund00055 Selenicereus undatus HOM05D004210 ORTHO05D005017 6.0e-180 634.8 632 58.7
ATR0661G188 Amborella trichopoda HOM05D004210 ORTHO05D005017 1.0e-179 634.0 540 64.4
Sc18g0006930 Simmondsia chinensis HOM05D004210 ORTHO05D005017 1.8e-179 633.3 566 62.7
ECA238G3001 Erigeron canadensis HOM05D004210 ORTHO05D005017 2.8e-177 625.9 518 65.8
BcaB04g20615 Brassica carinata HOM05D004210 ORTHO05D005017 3.7e-177 625.5 545 62.4
SGA_v2.0_scaffold196G40978 Striga asiatica HOM05D004210 ORTHO05D005017 4.8e-177 625.2 533 64.5
Sabra19G0013500 Salix brachista HOM05D004210 ORTHO05D005017 1.4e-176 623.6 515 66.0
Lalb_Chr18g0049111 Lupinus albus HOM05D004210 ORTHO05D005017 4.0e-176 622.1 540 63.1
Manes.13G077346 Manihot esculenta HOM05D004210 ORTHO05D005017 1.2e-175 620.5 404 77.2
Sabra19G0006000 Salix brachista HOM05D004210 ORTHO05D005017 1.5e-175 620.2 515 66.0
EL10Ac7g18124 Beta vulgaris HOM05D004210 ORTHO05D005017 4.5e-175 618.6 534 63.7
CARHR096890 Cardamine hirsuta HOM05D004210 ORTHO05D005017 1.0e-174 617.5 552 61.8
Duzib106G1791 Durio zibethinus HOM05D004210 ORTHO05D005017 5.5e-173 611.7 522 65.7
VMungo0647G0038 Vigna mungo HOM05D004210 ORTHO05D005017 4.3e-170 602.1 515 65.2
HanXRQChr14g0446551 Helianthus annuus HOM05D004210 ORTHO05D005017 1.6e-169 600.1 485 65.4
AL3G35010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 4.8e-169 598.6 541 60.6
A01p33790 Brassica napus HOM05D004210 ORTHO05D005017 4.6e-164 582.0 507 63.5
AL249U10010 Arabidopsis lyrata HOM05D004210 ORTHO05D005017 1.0e-163 580.9 401 70.8
Os03g0207900 Oryza sativa ssp. japonica HOM05D004210 ORTHO05D005017 1.7e-158 563.5 570 56.5
Zm00001eb007220 Zea mays HOM05D004210 ORTHO05D005017 3.6e-156 555.8 560 55.7
Ca_13103_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.4e-155 553.9 546 59.0
Psat2g059840 Pisum sativum HOM05D004210 ORTHO05D005017 7.2e-149 531.6 547 54.8
Mapoly0028s0049 Marchantia polymorpha HOM05D004210 ORTHO05D005017 5.9e-143 511.9 542 50.6
Pp3c12_14420 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.9e-142 509.6 547 51.6
TWI75G1118 Tripterygium wilfordii HOM05D004210 ORTHO05D005017 2.8e-129 466.5 490 53.1
AagrBONN_evm.TU.Sc2ySwM_344.4521 Anthoceros agrestis HOM05D004210 ORTHO05D005017 1.8e-128 463.8 548 47.8
Ca_24139_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 1.0e-126 458.0 549 53.4
AagrBONN_evm.TU.Sc2ySwM_368.940 Anthoceros agrestis HOM05D004210 ORTHO05D005017 7.5e-122 441.8 551 46.1
Dinv30359 Davidia involucrata HOM05D004210 ORTHO05D005017 7.5e-122 441.8 367 69.2
Phvul.011G184500 Phaseolus vulgaris HOM05D004210 ORTHO05D005017 6.3e-121 438.7 490 52.2
SMO145G0186 Selaginella moellendorffii HOM05D004210 ORTHO05D005017 1.8e-120 437.2 548 46.7
Eucgr.G02654 Eucalyptus grandis HOM05D004210 ORTHO05D005017 3.1e-120 436.4 437 59.7
Ca_24147_v3 Cicer arietinum L. HOM05D004210 ORTHO05D005017 4.5e-119 432.6 338 69.8
Lalb_Chr03g0032281 Lupinus albus HOM05D004210 ORTHO05D005017 8.6e-118 428.3 432 58.6
unitig_26.g9497 Utricularia gibba HOM05D004210 ORTHO05D005017 5.7e-114 415.6 378 62.2
CSS0025743 Camellia sinensis var. sinensis HOM05D004210 ORTHO05D005017 1.5e-106 391.0 379 61.5
CBR_g10843 Chara braunii HOM05D004210 ORTHO05D005017 4.4e-98 362.8 503 42.3
CBR_g18561 Chara braunii HOM05D004210 ORTHO05D005017 1.5e-93 347.8 537 39.1
SEGI_20000 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 8.9e-91 338.6 302 54.3
Dinv18710 Davidia involucrata HOM05D004210 ORTHO05D005017 9.3e-64 248.8 446 44.8
MBI16_g14436_MAGBIO Magnolia biondii HOM05D004210 ORTHO05D005017 2.8e-60 237.3 233 58.8
Cre03.g195750 Chlamydomonas reinhardtii HOM05D004210 ORTHO05D005017 2.5e-56 224.2 453 30.7
Dinv18720 Davidia involucrata HOM05D004210 ORTHO05D005017 2.1e-52 211.1 167 71.9
MCO03G571 Micromonas commoda HOM05D004210 ORTHO05D005017 2.6e-50 204.1 418 31.6
SEGI_15684 Sequoiadendron giganteum HOM05D004210 ORTHO05D005017 5.1e-46 189.9 272 47.4
PRCOL_00000885 Prasinoderma coloniale HOM05D004210 ORTHO05D005017 1.3e-44 185.3 520 30.2
Atru.chr12.1163 Acer truncatum HOM05D004210 ORTHO05D005017 3.1e-43 180.6 92 92.4
Pp3c4_7580 Physcomitrium patens HOM05D004210 ORTHO05D005017 2.6e-42 177.6 363 35.8
Rhsim01G0121500 Rhododendron simsii HOM05D004210 ORTHO05D005017 3.8e-41 173.7 109 82.6
Cfa023087 Carpinus fangiana HOM05D004210 ORTHO05D005017 1.4e-40 171.8 411 29.7
Glyma.12G171232 Glycine max HOM05D004210 ORTHO05D013328 1.4e-40 171.8 94 79.8
Aa31LG8G7760 Aethionema arabicum HOM05D004210 ORTHO05D005017 1.7e-36 158.3 115 67.0
VMungo1127G1364 Vigna mungo HOM05D004210 ORTHO05D005017 5.3e-35 153.3 164 51.2
Dinv18721 Davidia involucrata HOM05D004210 ORTHO05D005017 2.3e-30 137.9 100 75.0
Medtr5g069620 Medicago truncatula HOM05D004210 ORTHO05D005017 4.0e-22 110.5 80 60.0
Manes.13G077544 Manihot esculenta HOM05D004210 ORTHO05D005017 1.7e-17 95.1 146 52.7
Nn1g02745 Nelumbo nucifera HOM05D000508 ORTHO05D000371 2.2e-17 94.7 159 39.6
Atru.chr12.1162 Acer truncatum HOM05D004210 ORTHO05D005017 6.8e-14 83.2 149 50.3
Hma1.2p1_0892F.1_g233370 Hydrangea macrophylla HOM05D004210 ORTHO05D005017 1.7e-12 78.6 37 91.9
Nn1g04650 Nelumbo nucifera HOM05D004210 ORTHO05D005017 1.1e-11 75.9 36 91.7
unitig_26.g9496 Utricularia gibba HOM05D004210 ORTHO05D005017 1.6e-10 72.0 45 71.1
SHI06412 Sapria himalayana HOM05D004210 ORTHO05D000023 1.7e-09 68.6 33 87.9
HPP92_017571 Vanilla planifolia HOM05D005323 ORTHO05D006820 5.0e-09 67.0 283 22.6
SEGI_06199 Sequoiadendron giganteum HOM05D005323 ORTHO05D006820 6.5e-09 66.6 190 27.9
Lalb_Chr03g0032271 Lupinus albus HOM05D004210 ORTHO05D005017 8.5e-09 66.2 32 87.5
Migut.M00083 Erythranthe guttata HOM05D001610 ORTHO05D001585 4.2e-08 63.9 332 18.7
Mapoly0049s0059 Marchantia polymorpha HOM05D005323 ORTHO05D006820 4.2e-08 63.9 194 26.3
HPP92_028318 Vanilla planifolia HOM05D005323 ORTHO05D006820 7.2e-08 63.2 190 25.3
Pp3c6_28640 Physcomitrium patens HOM05D005323 ORTHO05D006820 1.0e-06 59.3 200 24.0
Aa31LG2G8460 Aethionema arabicum HOM05D000992 ORTHO05D001928 3.0e-06 57.8 230 23.0
Lj1A652T35 Lonicera japonica HOM05D001610 ORTHO05D001585 3.0e-06 57.8 347 19.6
GSVIVG01001162001 Vitis vinifera HOM05D002943 ORTHO05D002685 5.2e-06 57.0 77 39.0
Pp3c5_3050 Physcomitrium patens HOM05D005323 ORTHO05D006820 6.8e-06 56.6 200 24.5


User provided reference genes

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