Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 8.9e-190 666.8 334 100.0
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 2.5e-139 499.2 341 75.4
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 3.6e-106 389.0 320 64.7
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 4.7e-106 388.7 319 64.3
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 6.1e-106 388.3 289 67.1
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 8.0e-106 387.9 331 63.7
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.8e-105 386.7 276 73.9
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 6.7e-105 384.8 284 68.0
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 2.0e-104 383.3 293 65.5
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 7.5e-104 381.3 295 64.7
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.7e-103 379.0 288 67.4
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 4.8e-103 378.6 290 64.8
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 6.3e-103 378.3 288 67.0
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 6.3e-103 378.3 288 66.3
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 8.2e-103 377.9 333 61.6
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 8.2e-103 377.9 288 65.3
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 8.2e-103 377.9 285 67.7
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 1.1e-102 377.5 311 64.0
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.8e-102 376.7 284 67.6
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 3.1e-102 375.9 311 64.3
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 4.1e-102 375.6 311 64.0
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 5.3e-102 375.2 293 66.6
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 5.3e-102 375.2 293 66.6
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 7.0e-102 374.8 297 64.3
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 7.0e-102 374.8 296 65.5
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 9.1e-102 374.4 287 66.2
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 1.2e-101 374.0 284 65.5
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.6e-101 373.6 290 64.5
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 2.0e-101 373.2 292 64.4
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 3.5e-101 372.5 295 64.4
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 5.9e-101 371.7 288 66.0
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 1.0e-100 370.9 288 65.6
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 1.7e-100 370.2 288 64.9
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.7e-100 370.2 300 62.0
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 1.7e-100 370.2 284 66.5
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 3.8e-100 369.0 293 63.1
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 3.8e-100 369.0 289 65.4
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 3.8e-100 369.0 287 65.2
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 5.0e-100 368.6 284 66.2
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 6.5e-100 368.2 289 65.7
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 8.5e-100 367.9 285 66.0
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 8.5e-100 367.9 288 63.2
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 1.9e-99 366.7 296 64.5
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 1.9e-99 366.7 288 66.0
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 2.5e-99 366.3 284 65.1
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 2.5e-99 366.3 282 64.5
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 5.5e-99 365.2 282 65.2
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 7.2e-99 364.8 288 63.5
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 9.4e-99 364.4 292 64.0
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 3.6e-98 362.5 302 60.9
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 4.7e-98 362.1 331 60.1
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 8.0e-98 361.3 287 64.1
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 1.4e-97 360.5 287 64.5
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 2.3e-97 359.8 343 57.7
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 3.0e-97 359.4 282 64.5
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.5e-96 357.1 286 62.9
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 3.4e-96 355.9 293 62.5
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 5.7e-96 355.1 293 62.8
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 1.3e-95 354.0 309 59.5
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 1.7e-95 353.6 285 62.8
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.7e-95 353.6 301 59.1
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 2.2e-95 353.2 294 62.2
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 2.8e-95 352.8 287 64.1
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 4.8e-95 352.1 308 60.7
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 1.4e-94 350.5 296 59.1
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 2.4e-94 349.7 290 62.4
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 3.1e-94 349.4 317 58.0
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 4.5e-93 345.5 406 51.0
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 1.7e-92 343.6 296 58.1
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 3.8e-92 342.4 338 54.7
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 4.2e-91 339.0 364 54.9
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 2.7e-90 336.3 295 60.0
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 6.1e-90 335.1 328 53.0
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 8.0e-90 334.7 289 61.6
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.8e-89 333.6 303 56.8
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 1.7e-87 327.0 282 57.8
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 7.0e-86 321.6 294 55.8
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 9.2e-86 321.2 281 59.8
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 2.0e-85 320.1 287 59.6
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 1.9e-83 313.5 297 54.2
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 3.3e-83 312.8 256 62.5
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 9.5e-83 311.2 258 61.6
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 1.2e-82 310.8 291 55.7
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 6.1e-82 308.5 280 58.2
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 3.4e-80 302.8 304 53.3
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 4.1e-78 295.8 306 52.6
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 6.6e-76 288.5 292 54.8
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 5.6e-75 285.4 307 48.9
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 3.6e-74 282.7 327 47.1
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.6e-69 267.3 283 52.3
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 4.6e-69 265.8 271 53.1
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 1.3e-68 264.2 199 65.8
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.7e-68 263.8 309 45.3
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 1.1e-67 261.2 292 47.9
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 4.4e-64 249.2 313 48.2
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 5.4e-62 242.3 291 43.3
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 1.2e-56 224.6 321 41.1
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 5.4e-54 215.7 214 51.4
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 3.6e-50 203.0 155 65.2
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 2.4e-49 200.3 158 63.3
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 2.2e-47 193.7 149 62.4
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 3.9e-44 183.0 276 39.9
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.8e-41 174.1 136 61.8
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 2.9e-39 166.8 360 33.6
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 4.3e-35 152.9 296 35.5
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 3.5e-29 133.3 143 48.3
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 1.8e-25 120.9 163 43.6
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 2.7e-21 107.1 80 62.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 1.1e-17 95.1 67 67.2
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 5.5e-14 82.8 99 46.5
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 7.4e-11 72.4 149 35.6
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 5.0e-07 59.7 154 34.4
EL10Ac2g03043 Beta vulgaris HOM05D006539 ORTHO05D008694 8.5e-07 58.9 147 32.7
Duzib150G1339 Durio zibethinus HOM05D005801 ORTHO05D008555 1.1e-06 58.5 180 32.2
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 1.1e-06 58.5 147 31.3
AagrBONN_evm.TU.Sc2ySwM_117.170 Anthoceros agrestis HOM05D006539 ORTHO05D008694 3.2e-06 57.0 146 28.8
HanXRQChr10g0318931 Helianthus annuus HOM05D005801 ORTHO05D008555 3.2e-06 57.0 171 32.2
HanXRQChr10g0318941 Helianthus annuus HOM05D005801 ORTHO05D008555 3.2e-06 57.0 171 32.2
HanXRQChr14g0438761 Helianthus annuus HOM05D005801 ORTHO05D008555 3.2e-06 57.0 171 32.2
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 4.2e-06 56.6 154 33.8
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 4.2e-06 56.6 154 33.8
Duzib132G0722 Durio zibethinus HOM05D005801 ORTHO05D008555 4.2e-06 56.6 178 32.0
THA.LOC104814572 Tarenaya hassleriana HOM05D005801 ORTHO05D008555 4.2e-06 56.6 174 32.2
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 5.5e-06 56.2 154 33.8
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 5.5e-06 56.2 154 33.8
Cpa.g.sc14.138 Carica papaya HOM05D006539 ORTHO05D008694 5.5e-06 56.2 153 33.3
COL.COLO4_34743 Corchorus olitorius HOM05D005801 ORTHO05D008555 5.5e-06 56.2 180 31.7


User provided reference genes

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