Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 2.5e-83 312.0 153 100.0
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 4.5e-56 221.5 171 66.1
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 6.8e-52 207.6 166 63.9
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 5.7e-51 204.5 154 66.2
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.7e-50 203.0 169 59.2
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.7e-50 201.8 156 64.7
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 4.8e-50 201.4 160 60.0
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 6.3e-50 201.1 161 62.7
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.8e-49 199.5 157 63.1
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 3.1e-49 198.7 154 64.9
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 4.1e-49 198.4 169 59.8
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 4.1e-49 198.4 157 63.7
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 7.0e-49 197.6 167 61.1
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 7.0e-49 197.6 159 61.0
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 5.9e-48 194.5 171 58.5
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 1.7e-47 193.0 156 60.9
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.7e-47 193.0 154 61.7
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 1.7e-47 193.0 152 62.5
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.2e-47 192.6 151 61.6
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 3.8e-47 191.8 158 58.2
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 3.8e-47 191.8 158 60.1
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 5.0e-47 191.4 170 57.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 5.0e-47 191.4 154 61.7
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 6.5e-47 191.0 158 58.9
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 6.5e-47 191.0 165 58.8
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 1.1e-46 190.3 155 59.4
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 4.2e-46 188.3 158 57.6
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 1.2e-45 186.8 160 58.1
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 1.6e-45 186.4 157 59.2
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 1.6e-45 186.4 175 59.4
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 1.6e-45 186.4 159 59.7
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 1.6e-45 186.4 154 62.3
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 2.7e-45 185.7 157 58.6
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.0e-44 183.7 159 58.5
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.0e-44 183.7 160 58.8
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.4e-44 183.3 155 56.1
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.4e-44 183.3 165 56.4
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 2.3e-44 182.6 156 59.0
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 4.0e-44 181.8 157 58.6
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 1.2e-43 180.3 162 54.9
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.0e-43 179.5 156 57.1
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 2.0e-43 179.5 166 54.8
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.6e-43 179.1 156 57.1
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.6e-43 179.1 167 55.1
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 4.4e-43 178.3 168 54.8
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 1.3e-42 176.8 201 50.7
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 2.2e-42 176.0 156 57.1
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 2.8e-42 175.6 164 54.3
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 3.7e-42 175.3 156 53.8
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 3.1e-41 172.2 152 55.3
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 4.1e-41 171.8 159 54.1
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 5.4e-41 171.4 154 57.8
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 1.6e-40 169.9 154 55.2
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 7.7e-40 167.5 136 59.6
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 1.0e-39 167.2 146 54.8
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 1.0e-39 167.2 137 56.2
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 2.5e-38 162.5 150 56.0
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 2.5e-38 162.5 150 56.0
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 3.3e-38 162.2 151 51.7
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 5.6e-38 161.4 154 53.2
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 3.0e-36 155.6 154 50.6
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 4.0e-36 155.2 149 49.7
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 5.2e-36 154.8 159 49.7
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 6.8e-36 154.5 148 49.3
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 6.8e-36 154.5 188 43.6
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 6.8e-36 154.5 148 50.0
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 3.4e-35 152.1 137 53.3
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 7.5e-35 151.0 156 48.1
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 7.5e-35 151.0 156 48.1
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 9.8e-35 150.6 148 48.6
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 9.8e-35 150.6 151 49.0
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 9.8e-35 150.6 151 49.0
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 9.8e-35 150.6 156 48.1
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 9.8e-35 150.6 151 49.0
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 1.3e-34 150.2 155 50.3
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 1.7e-34 149.8 144 51.4
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 2.9e-34 149.1 164 47.0
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 2.9e-34 149.1 156 47.4
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 1.4e-33 146.7 155 47.7
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 5.4e-33 144.8 153 49.7
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 5.4e-33 144.8 142 50.7
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 1.6e-32 143.3 151 48.3
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 3.5e-32 142.1 125 55.2
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 7.8e-32 141.0 141 51.1
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.3e-31 139.4 156 46.2
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 3.3e-30 135.6 152 41.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 2.8e-29 132.5 152 42.1
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 6.2e-29 131.3 99 60.6
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.8e-28 129.8 152 41.4
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 2.6e-27 125.9 150 43.3
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.4e-27 125.6 117 54.7
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 1.1e-25 120.6 133 45.1
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 7.3e-22 107.8 113 50.4
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 2.3e-20 102.8 100 53.0
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.2e-18 96.3 91 50.5
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 2.9e-18 95.9 129 38.8
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 1.7e-15 86.7 86 52.3
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 3.9e-15 85.5 77 54.5
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.9e-14 83.2 85 51.8
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 1.1e-12 77.4 46 76.1
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 3.1e-12 75.9 95 38.9
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 1.9e-09 66.6 58 51.7


User provided reference genes

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