Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0258721 Helianthus annuus HOM05D004613 ORTHO05D006095 3.6e-174 614.8 304 100.0
ECA232G1001 Erigeron canadensis HOM05D004613 ORTHO05D006095 1.0e-139 500.4 306 80.7
Lsat_1_v5_gn_8_116060 Lactuca sativa HOM05D004613 ORTHO05D006095 1.7e-131 473.0 307 78.8
Cfa006537 Carpinus fangiana HOM05D004613 ORTHO05D006095 6.3e-110 401.4 298 68.5
CiPaw.08G167100 Carya illinoinensis HOM05D004613 ORTHO05D006095 1.1e-109 400.6 301 67.8
QL03p004304 Quercus lobata HOM05D004613 ORTHO05D006095 3.6e-105 385.6 338 61.8
MD12G1224400 Malus domestica HOM05D004613 ORTHO05D006095 1.0e-104 384.0 305 66.2
Ciclev10001987m.g Citrus clementina HOM05D004613 ORTHO05D006095 1.8e-104 383.3 301 65.8
Thecc.05G300000 Theobroma cacao HOM05D004613 ORTHO05D006095 5.2e-104 381.7 303 64.7
RcHm_v2.0_Chr3g0454031 Rosa chinensis HOM05D004613 ORTHO05D006095 1.2e-103 380.6 304 65.5
Sc09g0003370 Simmondsia chinensis HOM05D004613 ORTHO05D006095 1.5e-103 380.2 298 65.4
Solyc01g098630.3 Solanum lycopersicum HOM05D004613 ORTHO05D006095 2.0e-103 379.8 304 64.8
Sopen01g042180 Solanum pennellii HOM05D004613 ORTHO05D006095 7.5e-103 377.9 304 64.5
TWI56G1338 Tripterygium wilfordii HOM05D004613 ORTHO05D006095 7.5e-103 377.9 299 63.9
Potri.013G026700 Populus trichocarpa HOM05D004613 ORTHO05D006095 6.3e-102 374.8 305 63.6
Haze_04249 Corylus avellana HOM05D004613 ORTHO05D006095 1.8e-101 373.2 301 65.4
PSO407G0072 Papaver somniferum HOM05D004613 ORTHO05D006095 1.7e-99 366.7 305 63.6
PSO170G6761 Papaver somniferum HOM05D004613 ORTHO05D006095 2.9e-99 365.9 303 63.4
Aqoxy2G03209 Aquilegia oxysepala HOM05D004613 ORTHO05D006095 1.9e-98 363.2 307 62.5
CANSAT54G0471 Cannabis sativa HOM05D004613 ORTHO05D006095 2.5e-98 362.8 303 62.0
FvH4_6g05290 Fragaria vesca HOM05D004613 ORTHO05D006095 3.3e-98 362.5 304 62.8
Sed0016876 Sechium edule HOM05D004613 ORTHO05D006095 9.5e-98 360.9 304 61.5
FAN02G3501 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.6e-97 360.1 318 60.1
MELO3C015343.2 Cucumis melo HOM05D004613 ORTHO05D006095 4.7e-97 358.6 301 63.5
FAN14G3061 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.0e-96 357.5 299 61.9
Lj5g0014952 Lotus japonicus HOM05D004613 ORTHO05D006095 1.0e-96 357.5 304 59.9
CSS0015750 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 1.4e-96 357.1 216 79.2
FAN09G4458 Fragaria x ananassa HOM05D004613 ORTHO05D006095 1.8e-96 356.7 304 62.2
Phvul.007G182600 Phaseolus vulgaris HOM05D004613 ORTHO05D006095 3.1e-96 355.9 307 60.9
FAN05G3359 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.2e-96 355.1 304 61.8
Eucgr.B02002 Eucalyptus grandis HOM05D004613 ORTHO05D006095 6.8e-96 354.8 294 62.2
CsaV3_1G039190 Cucumis sativus L. HOM05D004613 ORTHO05D006095 1.2e-95 354.0 241 72.6
Gohir.D08G229400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 1.5e-95 353.6 301 62.5
EL10Ac4g09300 Beta vulgaris HOM05D004613 ORTHO05D006095 3.4e-95 352.4 301 60.5
FAN05G4103 Fragaria x ananassa HOM05D004613 ORTHO05D006095 5.8e-95 351.7 318 58.8
Gorai.004G243600 Gossypium raimondii HOM05D004613 ORTHO05D006095 5.8e-95 351.7 306 62.1
MSTRG.20469 Avicennia marina HOM05D004613 ORTHO05D006095 1.7e-94 350.1 218 78.0
TPR.G2750 Trifolium pratense HOM05D004613 ORTHO05D006095 2.9e-94 349.4 304 59.9
Gohir.A08G212400 Gossypium hirsutum HOM05D004613 ORTHO05D006095 6.4e-94 348.2 305 62.0
Rhsim07G0179300 Rhododendron simsii HOM05D004613 ORTHO05D006095 6.4e-94 348.2 369 52.3
Nitab4.5_0015025g0020 Nicotiana tabacum HOM05D004613 ORTHO05D006095 1.1e-93 347.4 329 57.1
TAR365G0571 Trochodendron aralioides HOM05D004613 ORTHO05D006095 1.4e-93 347.1 302 62.3
Atru.chr2.494 Acer truncatum HOM05D004613 ORTHO05D006095 2.4e-93 346.3 237 71.7
vmacro05035 Vaccinium macrocarpon HOM05D004613 ORTHO05D006095 2.4e-93 346.3 233 73.8
FAN14G4578 Fragaria x ananassa HOM05D004613 ORTHO05D006095 4.1e-93 345.5 323 58.5
Sp2g20610 Schrenkiella parvula HOM05D004613 ORTHO05D006095 3.5e-92 342.4 321 56.7
PGR083G0604 Punica granatum HOM05D004613 ORTHO05D006095 6.0e-92 341.7 299 57.9
Thhalv10004565m.g Eutrema salsugineum HOM05D004613 ORTHO05D006095 7.8e-92 341.3 319 56.1
ATR0626G318 Amborella trichopoda HOM05D004613 ORTHO05D006095 3.9e-91 339.0 237 70.0
Migut.B01124 Erythranthe guttata HOM05D004613 ORTHO05D006095 6.6e-91 338.2 218 75.2
AT5G27395 Arabidopsis thaliana HOM05D004613 ORTHO05D006095 1.1e-90 337.4 314 56.7
VMungo0720G0951 Vigna mungo HOM05D004613 ORTHO05D006095 1.5e-90 337.0 292 61.0
CARHR185980 Cardamine hirsuta HOM05D004613 ORTHO05D006095 2.5e-90 336.3 277 60.6
AL6G39630 Arabidopsis lyrata HOM05D004613 ORTHO05D006095 3.3e-90 335.9 321 55.5
DCAR_015964 Daucus carota HOM05D004613 ORTHO05D006095 4.3e-90 335.5 248 69.0
BcaNung02466 Brassica carinata HOM05D004613 ORTHO05D006095 5.6e-90 335.1 323 55.7
Prupe.6G330700 Prunus persica HOM05D004613 ORTHO05D006095 7.3e-90 334.7 299 59.2
Carub.0006s2516 Capsella rubella HOM05D004613 ORTHO05D006095 3.6e-89 332.4 319 55.8
Medtr1g082380 Medicago truncatula HOM05D004613 ORTHO05D006095 4.7e-89 332.0 303 56.8
A06p37600 Brassica napus HOM05D004613 ORTHO05D006095 6.2e-89 331.6 323 55.4
BraA06t26679Z Brassica rapa HOM05D004613 ORTHO05D006095 1.1e-88 330.9 325 55.4
Aa31LG11G9160 Aethionema arabicum HOM05D004613 ORTHO05D006095 1.4e-88 330.5 260 63.5
Nitab4.5_0004940g0150 Nicotiana tabacum HOM05D004613 ORTHO05D006095 2.3e-88 329.7 294 59.5
MBI17_g29025_MAGBIO Magnolia biondii HOM05D004613 ORTHO05D006095 5.2e-88 328.6 282 63.8
arahy.Tifrunner.gnm1.ann1.R33V11 Arachis hypogaea HOM05D004613 ORTHO05D006095 2.6e-87 326.2 306 57.2
BcaNung04365 Brassica carinata HOM05D004613 ORTHO05D006095 4.4e-87 325.5 322 54.3
C07p40710 Brassica napus HOM05D004613 ORTHO05D006095 5.8e-87 325.1 338 53.3
THA.LOC104818675 Tarenaya hassleriana HOM05D004613 ORTHO05D006095 1.3e-86 323.9 301 55.5
BolC7t44599H Brassica oleracea HOM05D004613 ORTHO05D006095 1.7e-86 323.6 338 53.3
GSVIVG01022058001 Vitis vinifera HOM05D004613 ORTHO05D006095 2.2e-86 323.2 194 77.8
Lalb_Chr02g0148411 Lupinus albus HOM05D004613 ORTHO05D006095 2.4e-85 319.7 295 57.3
CDE12G0359 Ceratophyllum demersum HOM05D004613 ORTHO05D006095 3.2e-85 319.3 202 74.3
Duzib128G1218 Durio zibethinus HOM05D004613 ORTHO05D006095 1.6e-84 317.0 303 55.4
Peaxi162Scf00434g00335 Petunia axillaris HOM05D004613 ORTHO05D006095 1.3e-83 313.9 213 72.3
arahy.Tifrunner.gnm1.ann1.LT91QM Arachis hypogaea HOM05D004613 ORTHO05D006095 1.7e-83 313.5 334 52.7
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 3.9e-83 312.4 275 59.6
Zm00001eb329390 Zea mays HOM05D004613 ORTHO05D006095 1.9e-82 310.1 230 63.9
Dinv40253 Davidia involucrata HOM05D004613 ORTHO05D006095 5.6e-82 308.5 205 74.1
Nn1g02102 Nelumbo nucifera HOM05D004613 ORTHO05D006095 8.1e-81 304.7 274 59.1
HPP92_006941 Vanilla planifolia HOM05D004613 ORTHO05D006095 2.3e-80 303.1 215 67.4
Glyma.20G231400 Glycine max HOM05D004613 ORTHO05D006095 3.4e-79 299.3 278 58.3
Lj9A681T39 Lonicera japonica HOM05D004613 ORTHO05D006095 7.6e-79 298.1 177 79.7
COL.COLO4_13522 Corchorus olitorius HOM05D004613 ORTHO05D006095 2.4e-77 293.1 276 58.0
Hund07039 Selenicereus undatus HOM05D004613 ORTHO05D006095 4.1e-77 292.4 298 53.4
PGR083G1611 Punica granatum HOM05D004613 ORTHO05D006095 5.6e-74 282.0 307 49.8
Glyma.10G157300 Glycine max HOM05D004613 ORTHO05D006095 3.4e-71 272.7 307 51.8
PGSC0003DMG400028600 Solanum tuberosum HOM05D004613 ORTHO05D006095 4.8e-65 252.3 234 58.5
Cc02_g32610 Coffea canephora HOM05D004613 ORTHO05D006095 9.0e-64 248.1 255 54.5
SHI18214 Sapria himalayana HOM05D004613 ORTHO05D006095 3.4e-63 246.1 173 68.8
ClCG03G016790 Citrullus lanatus HOM05D000665 ORTHO05D006095 1.1e-61 241.1 406 39.4
Cpa.g.sc48.6 Carica papaya HOM05D004613 ORTHO05D006095 7.1e-61 238.4 271 49.1
CAN.G1134.17 Capsicum annuum HOM05D004613 ORTHO05D006095 2.3e-59 233.4 173 66.5
Mapoly0007s0105 Marchantia polymorpha HOM05D004613 ORTHO05D006095 7.6e-55 218.4 224 49.1
SalBow8G2842 Salvia bowleyana HOM05D004613 ORTHO05D006095 9.9e-55 218.0 226 51.8
Pp3c24_5170 Physcomitrium patens HOM05D004613 ORTHO05D006095 1.9e-53 213.8 227 46.3
SEGI_25140 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 2.1e-52 210.3 156 66.0
Actinidia05726 Actinidia chinensis HOM05D004613 ORTHO05D006095 3.9e-51 206.1 270 47.0
BcaB04g19666 Brassica carinata HOM05D004613 ORTHO05D006095 1.1e-50 204.5 209 54.5
Sabra13G0027500 Salix brachista HOM05D004613 ORTHO05D006095 7.4e-50 201.8 287 44.9
Oeu012099.1 Olea europaea HOM05D004613 ORTHO05D006095 4.0e-48 196.1 218 53.2
SMO115G0217 Selaginella moellendorffii HOM05D004613 ORTHO05D006095 4.0e-48 196.1 240 43.3
MD04G1209800 Malus domestica HOM05D004613 ORTHO05D006095 9.0e-48 194.9 233 51.1
SGA_v2.0_scaffold199G41179 Striga asiatica HOM05D004613 ORTHO05D006095 7.6e-47 191.8 264 45.1
CBR_g37761 Chara braunii HOM05D004613 ORTHO05D006095 3.5e-44 183.0 249 43.4
AUR62000861 Chenopodium quinoa HOM05D004613 ORTHO05D006095 3.0e-43 179.9 184 53.8
AUR62005113 Chenopodium quinoa HOM05D004613 ORTHO05D006095 5.0e-38 162.5 276 41.7
unitig_747.g21346 Utricularia gibba HOM05D004613 ORTHO05D006095 8.5e-30 135.2 150 48.0
MCO14G439 Micromonas commoda HOM05D004613 ORTHO05D006095 3.6e-28 129.8 214 36.4
unitig_747.g21345 Utricularia gibba HOM05D004613 ORTHO05D006095 1.8e-27 127.5 70 80.0
HanXRQChr13g0397031 Helianthus annuus HOM05D004613 ORTHO05D006095 9.7e-26 121.7 111 66.7
Cc02_g32600 Coffea canephora HOM05D004613 ORTHO05D006095 2.8e-25 120.2 69 75.4
MD04G1209900 Malus domestica HOM05D004613 ORTHO05D006095 1.0e-19 101.7 59 81.4
AagrBONN_evm.TU.Sc2ySwM_117.373 Anthoceros agrestis HOM05D004613 ORTHO05D006095 1.7e-14 84.3 124 42.7
SEGI_04064 Sequoiadendron giganteum HOM05D004613 ORTHO05D006095 2.0e-10 70.9 49 63.3
A09p05250 Brassica napus HOM05D004613 ORTHO05D006095 3.3e-10 70.1 50 64.0
Cre02.g117300 Chlamydomonas reinhardtii HOM05D004613 ORTHO05D006095 2.8e-09 67.0 167 32.9
C09p05710 Brassica napus HOM05D004613 ORTHO05D006095 4.1e-08 63.2 50 60.0
CSS0002320 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0009134 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0011661 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0019992 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0023662 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0033019 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
CSS0041443 Camellia sinensis var. sinensis HOM05D004613 ORTHO05D006095 2.7e-07 60.5 49 57.1
C04p20620 Brassica napus HOM05D000249 ORTHO05D032228 2.2e-06 57.4 66 43.9
GSVIVG01000001001 Vitis vinifera HOM05D004613 ORTHO05D006095 2.9e-06 57.0 102 41.2


User provided reference genes

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