Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0258281 Helianthus annuus HOM05D007500 ORTHO05D009197 1.9e-66 255.8 134 100.0
Lsat_1_v5_gn_8_131281 Lactuca sativa HOM05D007500 ORTHO05D009197 1.7e-43 179.5 134 69.4
Nn5g28851 Nelumbo nucifera HOM05D007500 ORTHO05D009197 7.3e-34 147.5 131 58.8
Haze_12411 Corylus avellana HOM05D007500 ORTHO05D009197 8.0e-33 144.1 128 57.0
Cfa009364 Carpinus fangiana HOM05D007500 ORTHO05D009197 2.3e-32 142.5 128 57.8
Dinv14836 Davidia involucrata HOM05D007500 ORTHO05D009197 3.1e-32 142.1 134 57.5
THA.LOC104814194 Tarenaya hassleriana HOM05D007500 ORTHO05D009197 6.8e-32 141.0 133 56.4
CANSAT01G0539 Cannabis sativa HOM05D007500 ORTHO05D009197 2.0e-31 139.4 122 56.6
Cpa.g.sc43.48 Carica papaya HOM05D007500 ORTHO05D009197 3.4e-31 138.7 130 56.9
Ciclev10033679m.g Citrus clementina HOM05D007500 ORTHO05D009197 4.4e-31 138.3 131 57.3
ECA233G2547 Erigeron canadensis HOM05D007500 ORTHO05D009197 4.4e-31 138.3 108 71.3
COL.COLO4_20391 Corchorus olitorius HOM05D007500 ORTHO05D009197 5.8e-31 137.9 136 56.6
Atru.chr11.2314 Acer truncatum HOM05D007500 ORTHO05D009197 9.8e-31 137.1 131 54.2
Potri.001G055000 Populus trichocarpa HOM05D007500 ORTHO05D009197 1.3e-30 136.7 133 55.6
CSS0001813 Camellia sinensis var. sinensis HOM05D007500 ORTHO05D009197 1.7e-30 136.3 123 60.2
Solyc05g015330.1 Solanum lycopersicum HOM05D007500 ORTHO05D009197 2.9e-30 135.6 126 57.1
Sopen05g010600 Solanum pennellii HOM05D007500 ORTHO05D009197 4.9e-30 134.8 126 57.1
Duzib268G0307 Durio zibethinus HOM05D007500 ORTHO05D009197 8.3e-30 134.0 134 55.2
QL93p2010_0098 Quercus lobata HOM05D007500 ORTHO05D009197 8.3e-30 134.0 128 50.8
Manes.12G012100 Manihot esculenta HOM05D007500 ORTHO05D009197 1.1e-29 133.7 137 54.7
PGR102G0196 Punica granatum HOM05D007500 ORTHO05D009197 1.1e-29 133.7 129 55.8
AUR62024115 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.4e-29 133.3 131 54.2
Gohir.A03G126600 Gossypium hirsutum HOM05D007500 ORTHO05D009197 1.4e-29 133.3 138 51.4
Actinidia30653 Actinidia chinensis HOM05D007500 ORTHO05D009197 1.9e-29 132.9 121 59.5
CiPaw.05G110500 Carya illinoinensis HOM05D007500 ORTHO05D009197 2.4e-29 132.5 127 53.5
MELO3C011458.2 Cucumis melo HOM05D007500 ORTHO05D009197 2.4e-29 132.5 131 54.2
PGSC0003DMG400029106 Solanum tuberosum HOM05D007500 ORTHO05D009197 2.4e-29 132.5 144 52.1
Sabra01G0039500 Salix brachista HOM05D007500 ORTHO05D009197 3.2e-29 132.1 116 58.6
Gohir.D02G150000 Gossypium hirsutum HOM05D007500 ORTHO05D009197 4.1e-29 131.7 136 52.9
Gorai.005G168300 Gossypium raimondii HOM05D007500 ORTHO05D009197 4.1e-29 131.7 136 52.9
PSO541G0382 Papaver somniferum HOM05D007500 ORTHO05D009197 4.1e-29 131.7 118 57.6
QL03p052860 Quercus lobata HOM05D007500 ORTHO05D009197 4.1e-29 131.7 128 50.0
QL03p053117 Quercus lobata HOM05D007500 ORTHO05D009197 4.1e-29 131.7 128 50.0
TAR381G0854 Trochodendron aralioides HOM05D007500 ORTHO05D009197 4.1e-29 131.7 128 54.7
MBI01_g29007_MAGBIO Magnolia biondii HOM05D007500 ORTHO05D009197 7.0e-29 131.0 133 54.1
TWI18G0612 Tripterygium wilfordii HOM05D007500 ORTHO05D009197 7.0e-29 131.0 131 55.0
Aqoxy6G00433 Aquilegia oxysepala HOM05D007500 ORTHO05D009197 9.2e-29 130.6 123 56.1
arahy.Tifrunner.gnm1.ann1.Z93F9T Arachis hypogaea HOM05D007500 ORTHO05D009197 9.2e-29 130.6 138 49.3
Nitab4.5_0001404g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 9.2e-29 130.6 124 59.7
Thecc.02G209700 Theobroma cacao HOM05D007500 ORTHO05D009197 9.2e-29 130.6 123 54.5
Cc11_g16840 Coffea canephora HOM05D007500 ORTHO05D009197 2.7e-28 129.0 133 53.4
MSTRG.7998 Avicennia marina HOM05D007500 ORTHO05D009197 3.5e-28 128.6 117 54.7
Sc14g0009050 Simmondsia chinensis HOM05D007500 ORTHO05D009197 3.5e-28 128.6 128 50.8
Glyma.11G250000 Glycine max HOM05D007500 ORTHO05D009197 4.6e-28 128.3 133 50.4
Ca_16464_v3 Cicer arietinum L. HOM05D007500 ORTHO05D009197 6.0e-28 127.9 135 51.9
ClCG08G010070 Citrullus lanatus HOM05D007500 ORTHO05D009197 6.0e-28 127.9 131 51.1
Sed0012176 Sechium edule HOM05D007500 ORTHO05D009197 1.3e-27 126.7 129 51.2
CsaV3_6G032240 Cucumis sativus L. HOM05D007500 ORTHO05D009197 2.3e-27 125.9 126 53.2
EL10Ac6g13495 Beta vulgaris HOM05D007500 ORTHO05D009197 3.0e-27 125.6 132 52.3
BcaC06g31713 Brassica carinata HOM05D007500 ORTHO05D009197 3.0e-27 125.6 132 53.8
BcaC06g31714 Brassica carinata HOM05D007500 ORTHO05D009197 3.0e-27 125.6 132 53.8
Nitab4.5_0000861g0040 Nicotiana tabacum HOM05D007500 ORTHO05D009197 3.9e-27 125.2 119 58.0
Sp2g08040 Schrenkiella parvula HOM05D007500 ORTHO05D009197 5.0e-27 124.8 122 55.7
C07p25790 Brassica napus HOM05D007500 ORTHO05D009197 6.6e-27 124.4 133 50.4
Glyma.18G007100 Glycine max HOM05D007500 ORTHO05D009197 6.6e-27 124.4 133 50.4
Phvul.001G261300 Phaseolus vulgaris HOM05D007500 ORTHO05D009197 6.6e-27 124.4 133 49.6
A06p47960 Brassica napus HOM05D007500 ORTHO05D009197 1.9e-26 122.9 131 52.7
BraA06t27666Z Brassica rapa HOM05D007500 ORTHO05D009197 1.9e-26 122.9 131 52.7
Thhalv10003290m.g Eutrema salsugineum HOM05D007500 ORTHO05D009197 1.9e-26 122.9 122 54.1
FAN12G0274 Fragaria x ananassa HOM05D007500 ORTHO05D009197 1.9e-26 122.9 132 50.8
AT5G43250 Arabidopsis thaliana HOM05D007500 ORTHO05D009197 2.5e-26 122.5 121 52.1
BcaC06g34668 Brassica carinata HOM05D007500 ORTHO05D009197 2.5e-26 122.5 131 51.9
BolC7t43101H Brassica oleracea HOM05D007500 ORTHO05D009197 2.5e-26 122.5 131 51.9
Peaxi162Scf00128g00124 Petunia axillaris HOM05D007500 ORTHO05D009197 3.3e-26 122.1 134 50.0
VMungo1383G3421 Vigna mungo HOM05D007500 ORTHO05D009197 3.3e-26 122.1 133 49.6
AL8G17240 Arabidopsis lyrata HOM05D007500 ORTHO05D009197 5.6e-26 121.3 116 55.2
FvH4_4g23840 Fragaria vesca HOM05D007500 ORTHO05D009197 5.6e-26 121.3 132 50.0
FAN17G2194 Fragaria x ananassa HOM05D007500 ORTHO05D009197 5.6e-26 121.3 133 50.4
SGA_v2.0_scaffold9G04716 Striga asiatica HOM05D007500 ORTHO05D009197 5.6e-26 121.3 138 49.3
CARHR180640 Cardamine hirsuta HOM05D007500 ORTHO05D009197 7.3e-26 120.9 121 52.9
Migut.K00728 Erythranthe guttata HOM05D007500 ORTHO05D009197 7.3e-26 120.9 116 50.9
Rhsim12G0026300 Rhododendron simsii HOM05D007500 ORTHO05D009197 9.5e-26 120.6 120 54.2
SalBow2G0500 Salvia bowleyana HOM05D007500 ORTHO05D009197 1.2e-25 120.2 108 56.5
AUR62005615 Chenopodium quinoa HOM05D007500 ORTHO05D009197 1.6e-25 119.8 125 52.8
Aa31LG9G13320 Aethionema arabicum HOM05D007500 ORTHO05D009197 2.8e-25 119.0 131 49.6
Carub.0008s0545 Capsella rubella HOM05D007500 ORTHO05D009197 2.8e-25 119.0 132 49.2
FAN22G1415 Fragaria x ananassa HOM05D007500 ORTHO05D009197 3.6e-25 118.6 133 48.9
unitig_26.g10395 Utricularia gibba HOM05D007500 ORTHO05D009197 3.6e-25 118.6 122 48.4
CDE06G2379 Ceratophyllum demersum HOM05D007500 ORTHO05D009197 4.7e-25 118.2 123 52.0
DCAR_031200 Daucus carota HOM05D007500 ORTHO05D009197 6.2e-25 117.9 129 51.2
Lalb_Chr08g0230661 Lupinus albus HOM05D007500 ORTHO05D009197 2.3e-24 115.9 131 48.9
TPR.G28279 Trifolium pratense HOM05D007500 ORTHO05D009197 3.1e-24 115.5 103 56.3
Medtr3g085430 Medicago truncatula HOM05D007500 ORTHO05D009197 5.2e-24 114.8 131 48.1
Psat5g095440 Pisum sativum HOM05D007500 ORTHO05D009197 5.2e-24 114.8 133 47.4
PSO675G4883 Papaver somniferum HOM05D007500 ORTHO05D009197 6.8e-24 114.4 105 59.0
FAN07G2442 Fragaria x ananassa HOM05D007500 ORTHO05D009197 8.9e-24 114.0 133 47.4
Prupe.1G226700 Prunus persica HOM05D007500 ORTHO05D009197 8.9e-24 114.0 106 55.7
CAN.G43.17 Capsicum annuum HOM05D007500 ORTHO05D009197 1.5e-23 113.2 109 56.9
Ah.03g136190 Amaranthus hybridus HOM05D007500 ORTHO05D009197 2.0e-23 112.8 132 50.0
Lj6g0001546 Lotus japonicus HOM05D007500 ORTHO05D009197 3.4e-23 112.1 122 50.8
ATR1120G099 Amborella trichopoda HOM05D007500 ORTHO05D009197 4.4e-23 111.7 116 55.2
RcHm_v2.0_Chr4g0430411 Rosa chinensis HOM05D007500 ORTHO05D009197 6.4e-22 107.8 107 54.2
MD16G1118400 Malus domestica HOM05D007500 ORTHO05D009197 3.2e-21 105.5 121 48.8
MD13G1118300 Malus domestica HOM05D007500 ORTHO05D009197 5.4e-21 104.8 121 48.8
HPP92_002864 Vanilla planifolia HOM05D007500 ORTHO05D009197 1.7e-19 99.8 90 55.6
Zm00001eb122050 Zea mays HOM05D007500 ORTHO05D009197 2.2e-14 82.8 133 36.1
Os01g0183400 Oryza sativa ssp. japonica HOM05D007500 ORTHO05D009197 7.1e-13 77.8 121 37.2
CAN.G1248.23 Capsicum annuum HOM05D000764 ORTHO05D009197 1.3e-11 73.6 69 56.5
SEGI_35529 Sequoiadendron giganteum HOM05D007500 ORTHO05D009197 1.5e-10 70.1 77 44.2
SMO358G0741 Selaginella moellendorffii HOM05D020496 ORTHO05D009197 6.8e-08 61.2 87 40.2
Pp3c13_23370 Physcomitrium patens HOM05D020496 ORTHO05D009197 2.2e-06 56.2 141 33.3
Pp3c13_23373 Physcomitrium patens HOM05D020496 ORTHO05D009197 2.2e-06 56.2 141 33.3
Sp1g06610 Schrenkiella parvula HOM05D007207 ORTHO05D009041 2.2e-06 56.2 78 35.9
AT1G07980 Arabidopsis thaliana HOM05D007207 ORTHO05D009041 6.4e-06 54.7 91 29.7
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 6.4e-06 54.7 104 30.8
AagrBONN_evm.TU.Sc2ySwM_228.2890 Anthoceros agrestis HOM05D002489 ORTHO05D002653 8.4e-06 54.3 103 28.2
AL1G18310 Arabidopsis lyrata HOM05D007207 ORTHO05D009041 8.4e-06 54.3 78 32.1


User provided reference genes

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