Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 8.3e-49 196.8 107 100.0
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 2.5e-29 132.1 108 70.4
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 4.5e-26 121.3 98 66.3
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 9.9e-18 93.6 106 50.0
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 4.9e-17 91.3 106 50.0
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 1.1e-16 90.1 109 54.1
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.1e-16 90.1 106 50.0
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.6e-15 84.7 107 45.8
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.0e-15 84.3 115 47.8
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 6.0e-15 84.3 104 50.0
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.0e-14 83.6 104 46.2
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 2.3e-14 82.4 104 49.0
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 3.0e-14 82.0 107 48.6
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.0e-14 82.0 110 48.2
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.9e-14 81.6 104 47.1
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 5.1e-14 81.3 107 49.5
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 6.7e-14 80.9 85 52.9
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 6.7e-14 80.9 91 50.5
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 6.7e-14 80.9 100 53.0
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 8.7e-14 80.5 91 53.8
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 8.7e-14 80.5 110 45.5
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.9e-13 79.3 108 55.6
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 1.9e-13 79.3 109 49.5
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 4.3e-13 78.2 106 47.2
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 4.3e-13 78.2 107 46.7
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 5.6e-13 77.8 101 45.5
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 5.6e-13 77.8 107 51.4
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 5.6e-13 77.8 92 46.7
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 7.4e-13 77.4 107 45.8
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 9.6e-13 77.0 106 46.2
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 9.6e-13 77.0 104 45.2
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.3e-12 76.6 107 48.6
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 1.3e-12 76.6 109 54.1
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.3e-12 76.6 107 46.7
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.3e-12 76.6 106 48.1
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 1.6e-12 76.3 109 52.3
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 2.8e-12 75.5 90 51.1
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 2.8e-12 75.5 90 51.1
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 2.8e-12 75.5 108 47.2
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 2.8e-12 75.5 106 46.2
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 3.7e-12 75.1 104 51.0
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 4.8e-12 74.7 90 51.1
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 4.8e-12 74.7 90 51.1
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 6.2e-12 74.3 107 50.5
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.1e-11 73.6 108 46.3
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 1.1e-11 73.6 102 50.0
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 1.4e-11 73.2 104 48.1
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 2.4e-11 72.4 107 41.1
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 3.1e-11 72.0 108 45.4
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 4.0e-11 71.6 65 58.5
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 9.0e-11 70.5 102 49.0
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 9.0e-11 70.5 108 45.4
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.2e-10 70.1 106 43.4
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 1.2e-10 70.1 109 46.8
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 1.5e-10 69.7 108 47.2
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 1.5e-10 69.7 104 47.1
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 2.0e-10 69.3 102 48.0
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 2.0e-10 69.3 113 48.7
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 2.0e-10 69.3 106 48.1
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 2.6e-10 68.9 107 43.9
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 2.6e-10 68.9 105 41.9
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 2.6e-10 68.9 108 41.7
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 3.4e-10 68.6 106 43.4
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 4.5e-10 68.2 70 50.0
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 4.5e-10 68.2 70 50.0
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 4.5e-10 68.2 103 40.8
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.0e-09 67.0 109 47.7
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 1.3e-09 66.6 108 42.6
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.7e-09 66.2 110 44.5
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.7e-09 66.2 104 43.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 2.2e-09 65.9 108 43.5
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 2.9e-09 65.5 87 48.3
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 2.9e-09 65.5 109 45.0
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 3.8e-09 65.1 107 43.0
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 1.1e-08 63.5 106 38.7
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.1e-08 63.5 104 42.3
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 1.9e-08 62.8 92 44.6
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 7.1e-08 60.8 103 37.9
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 9.3e-08 60.5 104 44.2
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 1.2e-07 60.1 106 41.5
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 1.6e-07 59.7 105 43.8
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 2.7e-07 58.9 86 47.7
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 3.5e-07 58.5 102 36.3
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 3.5e-07 58.5 110 40.0
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 4.6e-07 58.2 82 46.3
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.6e-07 58.2 82 46.3
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.6e-07 58.2 82 46.3
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 1.3e-06 56.6 104 40.4
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 1.3e-06 56.6 103 37.9
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 1.3e-06 56.6 93 39.8
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.3e-06 56.6 104 41.3
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.8e-06 56.2 88 44.3
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 1.8e-06 56.2 90 44.4
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 5.1e-06 54.7 106 40.6
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.7e-06 54.3 82 51.2
Medtr8g095650 Medicago truncatula HOM05D000509 ORTHO05D006393 6.7e-06 54.3 87 44.8
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 8.7e-06 53.9 62 43.5
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 8.7e-06 53.9 62 43.5
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.7e-06 53.9 82 51.2
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.7e-06 53.9 82 51.2
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 8.7e-06 53.9 61 47.5


User provided reference genes

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